print "Second argument expected: path to a labels' file."
sys.exit(-1)
try:
out_path = sys.argv[3]
except:
print "Third argument expected: output-report file."
sys.exit(-1)
#try:
# training_size = int(sys.argv[3])
#except:
# print "Third argument expected: how many samples should be used for training."
# sys.exit(-1)
print "Loading labels' file:", labels_path
labels = jrs_io.load_labels(open(labels_path))
single_labels = list(set(reduce(lambda l1,l2: l1+l2, (ll for ll in labels))))
#training_labels = labels[:training_size]
n = len(labels)
print n," multi-labels sets loaded (",len(single_labels),"single labels:",single_labels,")..."
print "Sample five labels:", labels[:5]
print "------------------------------------------"
print "Extracting label occurrence vectors"
label2occurrences = dict( (label,label_ocur(labels, label)) for label in single_labels )
#print label2occurrences
print "------------------------------------------"
print "Loading features from file:", features_matrix_path
f = open(features_matrix_path)
features = jrs_io.load_data(f, cast_method = float, numrows = LOAD_MAX_ROWS)
except:
print "Argument expected: path to a labels' file."
sys.exit(-1)
try:
labels2_path = sys.argv[2]
except:
print "Argument expected: path to a second labels' file."
sys.exit(-1)
try:
out_path = sys.argv[3]
except:
print "Argument expected: output labels' file."
sys.exit(-1)
print "Loading labels' 1 file:", labels1_path
labels1 = jrs_io.load_labels(open(labels1_path))
try:
print "Loading labels' 2 file:", labels2_path
labels2 = jrs_io.load_labels(open(labels2_path))
except:
print "Failed loading file", labels2_path
print "Using empty file"
labels2 = [[] for i in xrange(len(labels1))]
labels12 = []
for i in xrange(len(labels1)):
labels12.append(sorted(set(labels1[i] + labels2[i])))
print "Writing to 1+2 file:", out_path
jrs_io.store_labels(open(out_path, "w"), labels12)
print "Next argument expected: path to a pos-features-ind file."
sys.exit(-1)
try:
negfeaturesind_path = sys.argv[4]
except:
print "Next argument expected: path to a neg-features-ind file."
sys.exit(-1)
try:
out_path = sys.argv[5]
except:
print "Next argument expected: output-features file."
sys.exit(-1)
print "Loading labels' file:", labels_path
labels = jrs_io.load_labels(open(labels_path))
single_labels = list(set(reduce(lambda l1,l2: l1+l2, (ll for ll in labels))))
n = len(labels)
print n," multi-labels sets loaded (",len(single_labels),"single labels:",single_labels,")..."
print "------------------------------------------"
print "Extracting label occurrence vectors"
label2occurrences = dict( (label,label_ocur(labels, label)) for label in single_labels )
#print label2occurrences
print "------------------------------------------"
print "Loading features from file:", features_matrix_path
f = open(features_matrix_path)
features = jrs_io.load_data(f, cast_method = int, numrows = LOAD_MAX_ROWS)
print "","loaded", len(features),"x",len(features[0])
print "------------------------------------------"
except:
print "Argument expected: path to a labels' file."
sys.exit(-1)
try:
labels2_path = sys.argv[2]
except:
print "Argument expected: path to a second labels' file."
sys.exit(-1)
try:
out_path = sys.argv[3]
except:
print "Argument expected: output labels' file."
sys.exit(-1)
print "Loading labels' 1 file:", labels1_path
labels1 = jrs_io.load_labels(open(labels1_path))
try:
print "Loading labels' 2 file:", labels2_path
labels2 = jrs_io.load_labels(open(labels2_path))
except:
print "Failed loading file", labels2_path
print "Using empty file"
labels2 = [[] for i in xrange(len(labels1))]
labels12 = []
for i in xrange(len(labels1)):
labels12.append( sorted(set(labels1[i]+labels2[i])) )
print "Writing to 1+2 file:", out_path
sys.exit(-1)
try:
fmeasure_paths = sys.argv[3]
fmeasure_paths = fmeasure_paths.split(',')
except:
print "Third argument expected: list of fmeasure files separated with <,> (comma)"
print "Argument not given using default..."
fmeasure_paths = [DEFAULT_FMEASURE_PATH for path in paths]
print "LOADING JRS-OUTPUT-FILES:", paths
files_labels = [] #at position list of lists of labels
for path in paths:
print "", "loading:", path
multilabels = jrs_io.load_labels(open(path),
cast_method=int,
separator=',')
print "", "sample:", multilabels[:5]
files_labels.append(multilabels)
print "LOADING FMEASURE-FILES:", fmeasure_paths
files_fmeasures = [] #at position dictionary{label_no: fmeasure}
for path in fmeasure_paths:
print "", "loading:", path
label2fmeasure = {}
for line in open(path).xreadlines():
#print "","line:",line
if len(line.strip()) == 0: break
label_no = int(line.split()[0])
f1 = float(line.split()[1])
label2fmeasure[label_no] = f1
sys.exit(-1)
try:
out_path = sys.argv[3]
except:
print "Third argument expected: output file"
sys.exit(-1)
try:
label_no = int(sys.argv[4])
except:
print "Argument expected: label to be overwritten no."
sys.exit(-1)
print "Loading labels' 1 file:", main_file
labels1 = jrs_io.load_labels(open(main_file))
print "", len(labels1), "rows loaded"
print "Loading labels' (weka-csv) 2 file:", aux_file
# inst#,actual,predicted,error,prediction
lines = open(aux_file).readlines()
labels2bool = list(line.split(",")[2].find("present") >= 0 for line in lines[1:] if len(line.strip()) > 0)
print "", len(labels2bool), "rows loaded"
# print labels2bool
removed = 0
added = 0
for i in xrange(len(labels1)):
if labels2bool[i]:
if not label_no in labels1[i]:
print "adding label no", label_no, "to", i, "sample"
sys.exit(-1)
try:
out_path = sys.argv[3]
except:
print "Third argument expected: output file"
sys.exit(-1)
try:
label_no = int(sys.argv[4])
except:
print "Argument expected: label to be overwritten no."
sys.exit(-1)
print "Loading labels' 1 file:", main_file
labels1 = jrs_io.load_labels(open(main_file))
print "", len(labels1), "rows loaded"
print "Loading labels' (weka-csv) 2 file:", aux_file
#inst#,actual,predicted,error,prediction
lines = open(aux_file).readlines()
labels2bool = list(
line.split(",")[2].find("present") >= 0 for line in lines[1:]
if len(line.strip()) > 0)
print "", len(labels2bool), "rows loaded"
#print labels2bool
removed = 0
added = 0
for i in xrange(len(labels1)):
if labels2bool[i]:
sys.exit(-1)
try:
fmeasure_paths = sys.argv[3]
fmeasure_paths = fmeasure_paths.split(',')
except:
print "Third argument expected: list of fmeasure files separated with <,> (comma)"
print "Argument not given using default..."
fmeasure_paths = [DEFAULT_FMEASURE_PATH for path in paths]
print "LOADING JRS-OUTPUT-FILES:",paths
files_labels = [] #at position list of lists of labels
for path in paths:
print "","loading:", path
multilabels = jrs_io.load_labels(open(path), cast_method = int, separator=',')
print "","sample:",multilabels[:5]
files_labels.append( multilabels )
print "LOADING FMEASURE-FILES:",fmeasure_paths
files_fmeasures = [] #at position dictionary{label_no: fmeasure}
for path in fmeasure_paths:
print "","loading:", path
label2fmeasure = {}
for line in open(path).xreadlines():
#print "","line:",line
if len(line.strip()) == 0: break
label_no = int(line.split()[0])
f1 = float(line.split()[1])
label2fmeasure[label_no] = f1
print "","sample:",list(label2fmeasure.iteritems())[:5]