def testIsValidFalseAnnot(self):
false_annot_null = annot.Annotation("slr0399_synechocystis", [])
self.failIf(false_annot_null.is_valid())
false_annot_single_ko = annot.Annotation('hsa:124', [['K00002',], ])
self.failIf(false_annot_single_ko.is_valid())
false_annot_multi_kos = annot.Annotation('hsa:124', [['K00001',], ['K00002',] ])
self.failIf(false_annot_multi_kos.is_valid())
def testTestKos(self):
myannot = annot.Annotation('hsa:10020', [['K01791',], ['K00885',]])
kos = ['K01791', 'K00885']
self.failUnlessEqual(myannot.get_kos(), kos)
def testIsValidTrueAnnot(self):
true_annot_single_ko = annot.Annotation('hsa:124', [['K00001',],])
self.assert_(true_annot_single_ko.is_valid())
def testHasKoNullAnnot(self):
""" test for methd: has_ko
"""
null_annot = annot.Annotation("slr0399_synechocystis", ['K00001',])
self.assert_(null_annot.has_ko())
def testHasKoNullAnnot(self):
""" test for methd: has_ko
"""
null_annot = annot.Annotation("slr0399_synechocystis", [])
self.failIf(null_annot.has_ko())