def post(self):
plate_id = self.get_argument('plate-id')
concentrations = json_decode(self.get_argument('concentrations'))
concentrations = np.asarray(concentrations)
plate = Plate(plate_id)
q_process = QuantificationProcess.create(self.current_user, plate,
concentrations)
pool_name = 'Pool - %s' % plate.external_id
input_compositions = []
concentrations = q_process.concentrations
total_vol = 0
for conc in concentrations:
in_vol = conc[1]
total_vol += in_vol
input_compositions.append({
'composition': conc[0],
'input_volume': in_vol,
'percentage_of_output': in_vol
})
for ic in input_compositions:
ic['percentage_of_output'] = ic['percentage_of_output'] / total_vol
process = PoolingProcess.create(self.current_user, q_process,
pool_name, total_vol,
input_compositions)
self.write({'process': process.id})
def post(self):
plates_info = json_decode(self.get_argument('plates-info'))
processes = []
for pinfo in plates_info:
plate = Plate(pinfo['plate_id'])
concentrations = np.asarray(pinfo['concentrations'])
processes.append(QuantificationProcess.create(
self.current_user, plate, concentrations).id)
self.write({'processes': processes})
def create_quantification_process(user, plate):
plate_config = plate.plate_configuration
concentrations = np.around(
np.random.rand(plate_config.num_rows, plate_config.num_columns), 6)
quant_process = QuantificationProcess.create(user, plate, concentrations)
return quant_process