Exemplos de TiltSeriesData em Python

Exemplo n.º 1

Arquivo: manualimageloader.py Projeto: a01092023741/myami-3.2-freeHand

 def setTiltSeries(self):
     grouplimit = self.settings['tilt group']
     if grouplimit == 1:
         self.tiltseries = None
         self.logger.info('setting tilt series to None')
     else:
         self.logger.info('setting tilt series')
         if self.tilt == 0:
             self.tiltseries = leginondata.TiltSeriesData()
             #self.tiltseries['session'] = self.session
             self.tiltseries['number'] = grouplimit
             self.publish(self.tiltseries, database=True, dbforce=True)
         if self.tilt >= grouplimit - 1:
             self.tilt = 0
         else:
             self.tilt = self.tilt + 1

Exemplo n.º 2

	def moveAndPreset(self, presetdata, emtarget):
		'''
		extend Acquisition.moveAndPreset because additionally we need to
		return to the same defocus as the other images in the tilt series
		'''
		status = acquisition.Acquisition.moveAndPreset(self, presetdata, emtarget)
		if status == 'error':
			return status
		targetdata = emtarget['target']
		tiltseries,defocus = self.getTiltSeries(targetdata, presetdata)
		if tiltseries is None:
			self.tiltseries = leginondata.TiltSeriesData()
			self.publish(self.tiltseries, database=True, dbforce=True)
		else:
			self.tiltseries = tiltseries
		return status