def test_yPixelsBetweenFrames_betweenFirstAndSecondIndex_zeroPixels(self):
        # Setup
        df = pd.DataFrame()
        df = df.append({'frameNumber': int(100), 'driftY': 0, 'driftX': 0}, ignore_index=True)
        df = df.append({'frameNumber': int(104), 'driftY': 16, 'driftX': 0}, ignore_index=True)

        # Exercise
        driftData = DriftData(df)
        result = driftData.yPixelsBetweenFrames(101,103)

        # Assert
        self.assertEqual(result, 8)
    def test_yPixelsBetweenFrames_sameFrameInDataFrame_zeroPixels(self):
        # Setup
        df = pd.DataFrame()
        df = df.append({'frameNumber': int(98), 'driftY': 16, 'driftX': 0}, ignore_index=True)
        df = df.append({'frameNumber': int(100), 'driftY': 16, 'driftX': 0}, ignore_index=True)
        df = df.append({'frameNumber': int(102), 'driftY': 16, 'driftX': 0}, ignore_index=True)

        # Exercise
        driftData = DriftData(df)
        result = driftData.yPixelsBetweenFrames(100,100)

        # Assert
        self.assertEqual(result, 0)
    def test_yPixelsBetweenFrames_secondParemeterIsLessThanFirstFrame_returnsNone(self):
        # Setup
        df = pd.DataFrame()

        df = df.append({'frameNumber': int(98), 'driftY': 16, 'driftX': 0}, ignore_index=True)
        df = df.append({'frameNumber': int(100), 'driftY': 16, 'driftX': 0}, ignore_index=True)

        # Exercise
        driftData = DriftData(df)
        result = driftData.yPixelsBetweenFrames(100,50)

        # Assert
        self.assertEqual(result, None)
    def test_yPixelsBetweenFrames_bothFrameIDsInDataFrame_pixelsIsDrift(self):
        # Setup
        df = pd.DataFrame()

        df = df.append({'frameNumber': int(98), 'driftY': 0, 'driftX': 0}, ignore_index=True)
        df = df.append({'frameNumber': int(100), 'driftY': 7, 'driftX': 0}, ignore_index=True)
        df = df.append({'frameNumber': int(102), 'driftY': 11, 'driftX': 0}, ignore_index=True)

        # Exercise
        driftData = DriftData(df)
        result = driftData.yPixelsBetweenFrames(100,102)

        # Assert
        self.assertEqual(result, 11)
    def test_yPixelsBetweenFrames_secondParemeterIsLargerThanLastFrameID_returnsNone(self):
        # Setup
        df = pd.DataFrame()
        #df = pd.DataFrame(columns=['frameNumber', 'driftY'])

        df = df.append({'frameNumber': int(98), 'driftY': 16, 'driftX': 0}, ignore_index=True)
        df = df.append({'frameNumber': int(100), 'driftY': 16, 'driftX': 0}, ignore_index=True)

        # Exercise
        driftData = DriftData(df)
        result = driftData.yPixelsBetweenFrames(99, 105)

        # Assert
        self.assertEqual(result, None)
    def test_yPixelsBetweenFrames_stepsInDataFrameAreUnequal_proRatedAndYDrift(self):
        # Setup
        df = pd.DataFrame()
        df = df.append({'frameNumber': int(97), 'driftY': 0, 'driftX': 0}, ignore_index=True)
        df = df.append({'frameNumber': int(100), 'driftY': 15, 'driftX': 0}, ignore_index=True) #drift-per-frame = 5
        df = df.append({'frameNumber': int(107), 'driftY': 21, 'driftX': 0}, ignore_index=True) #drift-per-frame = 3
        df = df.append({'frameNumber': int(110), 'driftY': 6, 'driftX': 0}, ignore_index=True) #drift-per-frame = 2
        #df.count()

        # Exercise
        driftData = DriftData(df)
        resultTwoFramesStep = driftData.yPixelsBetweenFrames(98,108)

        # Assert
        self.assertEqual(resultTwoFramesStep, (2*5+21+1*2))
    def test_yPixelsBetweenFrames_complexStep_proRatedAndYDrift(self):
        # Setup
        df = pd.DataFrame()
        df = df.append({'frameNumber': int(95), 'driftY': 0, 'driftX': 0}, ignore_index=True)
        df = df.append({'frameNumber': int(100), 'driftY': 15, 'driftX': 0}, ignore_index=True) #drift-per-frame = 3
        df = df.append({'frameNumber': int(105), 'driftY': 25, 'driftX': 0}, ignore_index=True) #drift-per-frame = 5
        df = df.append({'frameNumber': int(110), 'driftY': 35, 'driftX': 0}, ignore_index=True) #drift-per-frame = 2
        #df.count()

        # Exercise
        driftData = DriftData(df)
        resultTwoFramesStep = driftData.yPixelsBetweenFrames(97,107)

        # Assert
        self.assertEqual(resultTwoFramesStep, (3*3+25+7*2))
    def regenerateSeefloor(self):
        driftsStepSize = self.step_size()
        print "Using driftsStepSize: " + str(driftsStepSize)

        #TODO: extract logic in few rows into a "regenerate drafts" module/class
        print("regenerating/interpolating Drafts")
        manualDrifts = DriftManualData.createFromFile(self.__folderStruct)

        rawDrifts = DriftRawData(self.__folderStruct)
        df = rawDrifts.interpolate(manualDrifts, driftsStepSize)

        drifts = DriftData.createFromFolderStruct(self.__folderStruct)
        drifts.setDF(df)
        drifts.saveToFile(self.__folderStruct.getDriftsFilepath())

        print("regenerating/interpolating RedDots")
        rdd = RedDotsData.createFromFolderStruct(self.__folderStruct)
        rdd.saveInterpolatedDFToFile(drifts.minFrameID(),
                                     drifts.maxFrameID() + 1)

        print("regenerating SeeFloor")
        sf = SeeFloor.createFromFolderStruct(self.__folderStruct)
        sf.saveToFile()

        print("regenerating crabs_on_seefloor")
        crabs = CrabsData(self.__folderStruct)
        crabs_on_seefloor_df = crabs.generate_crabs_on_seefloor(sf)
        crabs_on_seefloor_df.save_file_csv(
            self.__folderStruct.getCrabsOnSeefloorFilepath())
    def test_yPixelsBetweenFrames_frameIDsinReverseOrder_negativePixels(self):
        # Setup
        df = pd.DataFrame()

        df = df.append({'frameNumber': int(98), 'driftY': 0, 'driftX': 0}, ignore_index=True)
        df = df.append({'frameNumber': int(100), 'driftY': 7, 'driftX': 0}, ignore_index=True)
        df = df.append({'frameNumber': int(102), 'driftY': 11, 'driftX': 0}, ignore_index=True)
        df = df.append({'frameNumber': int(104), 'driftY': 13, 'driftX': 0}, ignore_index=True)
        df = df.append({'frameNumber': int(106), 'driftY': 17, 'driftX': 0}, ignore_index=True)

        # Exercise
        driftData = DriftData(df)
        result = driftData.yPixelsBetweenFrames(106,100)

        # Assert
        self.assertEqual(result, -(11+13+17))
Exemplo n.º 10
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    def test_yPixelsBetweenFrames_bothFrameIDsInDataFrameSeveralEntreesApart_pixelsIsSumOfDrifts(self):
        # Setup
        df = pd.DataFrame()

        df = df.append({'frameNumber': int(98), 'driftY': 0, 'driftX': 0}, ignore_index=True)
        df = df.append({'frameNumber': int(100), 'driftY': 7, 'driftX': 0}, ignore_index=True)
        df = df.append({'frameNumber': int(102), 'driftY': 11, 'driftX': 0}, ignore_index=True)
        df = df.append({'frameNumber': int(104), 'driftY': 13, 'driftX': 0}, ignore_index=True)
        df = df.append({'frameNumber': int(106), 'driftY': 17, 'driftX': 0}, ignore_index=True)

        # Exercise
        driftData = DriftData(df)
        result = driftData.yPixelsBetweenFrames(100,106)

        # Assert
        self.assertEqual(result, (11+13+17))
Exemplo n.º 11
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    def test_jumpToSeefloorSlice_fractionalFrameWithoutBadBlocks(self):
        # Setup
        pixels_in_frame = Frame.FRAME_HEIGHT
        pixels_in_half_frame = int(pixels_in_frame / 2)

        drifts_df = pd.DataFrame()
        drifts_df = self.__append_to_drifts_df(drifts_df, 100, 0, 0)
        drifts_df = self.__append_to_drifts_df(drifts_df, 200, 0,
                                               pixels_in_half_frame)
        drifts_df = self.__append_to_drifts_df(drifts_df, 300, 0,
                                               pixels_in_half_frame)
        drifts_df = self.__append_to_drifts_df(drifts_df, 400, 0,
                                               pixels_in_half_frame)
        drifts_df = self.__append_to_drifts_df(drifts_df, 500, 0,
                                               pixels_in_half_frame)
        drifts_df = self.__append_to_drifts_df(drifts_df, 600, 0,
                                               pixels_in_half_frame)
        drifts_df = self.__append_to_drifts_df(drifts_df, 700, 0,
                                               pixels_in_half_frame)
        driftData = DriftData(drifts_df)

        badframesData = BadFramesData(None, None)
        seeFloor = SeeFloor(driftData, badframesData, None, None)

        # Exercise

        # Assert
        self.assertEqual(300, seeFloor.jumpToSeefloorSlice(200, 0.5))
        self.assertEqual(267, seeFloor.jumpToSeefloorSlice(200, 0.33333))
        self.assertEqual(350, seeFloor.jumpToSeefloorSlice(200, 0.75))
        self.assertEqual(450, seeFloor.jumpToSeefloorSlice(200, 1.25))
        self.assertEqual(500, seeFloor.jumpToSeefloorSlice(200, 1.5))

        self.assertEqual(500, seeFloor.jumpToSeefloorSlice(600, -0.5))
        self.assertEqual(290, seeFloor.jumpToSeefloorSlice(600, -1.55))
Exemplo n.º 12
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    def createFromFolderStruct(folderStruct):
        # type: (FolderStructure) -> SeeFloorNoBadBlocks

        driftsData = DriftData.createFromFolderStruct(folderStruct)
        redDotsData = RedDotsData.createFromFolderStruct(folderStruct)

        filepath = folderStruct.getSeefloorFilepath()
        if folderStruct.fileExists(filepath):
            #df = pd.read_csv(filepath, delimiter="\t", na_values="(null)")
            df = PandasWrapper.readDataFrameFromCSV(filepath)
        else:
            df = None
        newObj = SeeFloorNoBadBlocks(driftsData, redDotsData, folderStruct, df)
        return newObj
Exemplo n.º 13
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    def createFromFolderStruct(folderStruct):
        # type: (FolderStructure) -> SeeFloor

        driftsData = DriftData.createFromFolderStruct(folderStruct)
        badFramesData = BadFramesData.createFromFolderStruct(folderStruct)
        redDotsData = RedDotsData.createFromFolderStruct(folderStruct)

        filepath = folderStruct.getSeefloorFilepath()
        if folderStruct.fileExists(filepath):
            df = PandasWrapper.readDataFrameFromCSV(filepath)
        else:
            df = None
        newObj = SeeFloor(driftsData, badFramesData, redDotsData, folderStruct,
                          df)
        return newObj
Exemplo n.º 14
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    def test_maxFrameID_noBadFrames(self):
        # Setup
        drifts_df = pd.DataFrame()

        drifts_df = self.__append_to_drifts_df(drifts_df, 95, 0, 16)
        drifts_df = self.__append_to_drifts_df(drifts_df, 100, 0, 16)
        drifts_df = self.__append_to_drifts_df(drifts_df, 98, 0, 16)
        driftData = DriftData(drifts_df)

        badframesData = BadFramesData(None, None)
        seeFloor = SeeFloor(driftData, badframesData, None, None)

        # Exercise
        maxFrameID = seeFloor.maxFrameID()
        minFrameID = seeFloor.minFrameID()

        # Assert
        self.assertEqual(minFrameID, 95)
        self.assertEqual(maxFrameID, 100)
Exemplo n.º 15
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    def test_jumpToSeefloorSlice_badFramesEmpty(self):
        # Setup
        pixels_in_frame = Frame.FRAME_HEIGHT
        pixels_in_half_frame = int(pixels_in_frame / 2)

        drifts_df = pd.DataFrame()
        drifts_df = self.__append_to_drifts_df(drifts_df, 100, 0, 0)
        drifts_df = self.__append_to_drifts_df(drifts_df, 200, 0,
                                               pixels_in_half_frame)
        drifts_df = self.__append_to_drifts_df(drifts_df, 300, 0,
                                               pixels_in_half_frame)
        drifts_df = self.__append_to_drifts_df(drifts_df, 400, 0,
                                               pixels_in_half_frame)
        drifts_df = self.__append_to_drifts_df(drifts_df, 500, 0,
                                               pixels_in_half_frame)
        drifts_df = self.__append_to_drifts_df(drifts_df, 600, 0,
                                               pixels_in_half_frame)
        drifts_df = self.__append_to_drifts_df(drifts_df, 700, 0,
                                               pixels_in_half_frame)
        drifts_df = self.__append_to_drifts_df(drifts_df, 800, 0,
                                               pixels_in_half_frame)
        driftData = DriftData(drifts_df)

        #badframes_df = pd.DataFrame()
        badframes_df = BadFramesData.create_empty_df()
        badframesData = BadFramesData.createFromDataFrame(None, badframes_df)

        # --- good frames are 150-574 and 625-689. startFrame is 100, endFrame is 700

        seeFloor = SeeFloor(driftData, badframesData, None, None)

        # Exercise
        # Assert
        self.assertEqual(100, seeFloor.jumpToSeefloorSlice(
            10, 1))  # if parameter is out of bounds show first/last frame
        self.assertEqual(100, seeFloor.jumpToSeefloorSlice(99, 1))
        self.assertEqual(300, seeFloor.jumpToSeefloorSlice(100, 1))
        self.assertEqual(600, seeFloor.jumpToSeefloorSlice(200, 2))
        self.assertEqual(600, seeFloor.jumpToSeefloorSlice(800, -1))
        self.assertEqual(400, seeFloor.jumpToSeefloorSlice(800, -2))
        self.assertEqual(500, seeFloor.jumpToSeefloorSlice(700, -1))
        self.assertEqual(300, seeFloor.jumpToSeefloorSlice(700, -2))
Exemplo n.º 16
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    def test_maxFrameID_badFramesAtTheEnd(self):
        # Setup
        drifts_df = pd.DataFrame()
        drifts_df = self.__append_to_drifts_df(drifts_df, 95, 0, 16)
        drifts_df = self.__append_to_drifts_df(drifts_df, 100, 0, 16)
        drifts_df = self.__append_to_drifts_df(drifts_df, 98, 0, 16)
        driftData = DriftData(drifts_df)

        badframes_df = pd.DataFrame()
        badframes_df = self.__append_to_badframes_df(badframes_df, 99, 101)
        badframes_df = self.__append_to_badframes_df(badframes_df, 92, 95)
        badframesData = BadFramesData.createFromDataFrame(None, badframes_df)

        seeFloor = SeeFloor(driftData, badframesData, None, None)

        # Exercise
        minFrameID = seeFloor.minFrameID()
        maxFrameID = seeFloor.maxFrameID()

        # Assert
        self.assertEqual(minFrameID, 96)
        self.assertEqual(maxFrameID, 98)
Exemplo n.º 17
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    def test_Feature_frameBeforeFirst_throwsValueErrorException(self):
        # Setup
        df = pd.DataFrame()
        df = df.append({
            'frameNumber': int(71),
            'driftY': 13,
            'driftX': -3
        },
                       ignore_index=True)
        df = df.append({
            'frameNumber': int(73),
            'driftY': 13,
            'driftX': -3
        },
                       ignore_index=True)
        df = df.append({
            'frameNumber': int(75),
            'driftY': 13,
            'driftX': -3
        },
                       ignore_index=True)
        driftData = DriftData(df)

        location = Point(
            1442, 608)  # some valid value that is irrelevant for the test
        box_size = 200  # some valid value that is irrelevant for the test

        # Exercise
        with self.assertRaises(Exception) as cm:
            Feature(driftData, 60, location, box_size)

        the_exception = cm.exception

        # Assert
        self.assertIsInstance(the_exception, ValueError)
        self.assertEqual(
            the_exception.message,
            "Frame Number below minimum. Passed frame: 60. Minimum frame: 71")
Exemplo n.º 18
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    def test_Feature_closeToFirstAndLastFrame_returnsNone(self):
        # Setup
        df = pd.DataFrame()
        #df = pd.DataFrame(columns=['frameNumber', 'driftY'])

        df = df.append({
            'frameNumber': int(71),
            'driftY': 13,
            'driftX': -3
        },
                       ignore_index=True)
        df = df.append({
            'frameNumber': int(73),
            'driftY': 13,
            'driftX': -3
        },
                       ignore_index=True)
        df = df.append({
            'frameNumber': int(75),
            'driftY': 13,
            'driftX': -3
        },
                       ignore_index=True)
        driftData = DriftData(df)

        location = Point(1442, 608)
        box_size = 200

        # Exercise
        feature_firstFrame = Feature(driftData, 71, location, box_size)
        feature_middleFrame = Feature(driftData, 73, location, box_size)
        feature_lastFrame = Feature(driftData, 75, location, box_size)

        # Assert
        self.assertIsNotNone(feature_firstFrame)
        self.assertIsNotNone(feature_middleFrame)
        self.assertIsNotNone(feature_lastFrame)
Exemplo n.º 19
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    def test_yPixelsBetweenFrames_smallStepFromFrameIDinDataFrame_proRatedPixels(self):
        # Setup
        df = pd.DataFrame()
        df = df.append({'frameNumber': int(95), 'driftY': 0, 'driftX': 0}, ignore_index=True)
        df = df.append({'frameNumber': int(100), 'driftY': 15, 'driftX': 0}, ignore_index=True) #drift-per-frame = 3
        df = df.append({'frameNumber': int(105), 'driftY': 25, 'driftX': 0}, ignore_index=True) #drift-per-frame = 5
        #df.count()

        # Exercise
        driftData = DriftData(df)
        resultTwoFramesStep = driftData.yPixelsBetweenFrames(95,97)
        resultThreeFramesStep = driftData.yPixelsBetweenFrames(95,98)

        oneFrameStep = driftData.yPixelsBetweenFrames(100,101)
        fourFramesStep = driftData.yPixelsBetweenFrames(100,104)
        # Assert
        self.assertEqual(resultTwoFramesStep, (3*2))
        self.assertEqual(resultThreeFramesStep, (3*3))
        self.assertEqual(oneFrameStep, (5*1))
        self.assertEqual(fourFramesStep, (5*4))
Exemplo n.º 20
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 def refreshItself(self):
     self.__driftData = DriftData.createFromFolderStruct(
         self.__folderStruct)
     self.__redDotsData = RedDotsData.createFromFolderStruct(
         self.__folderStruct)
     self.saveToFile()
Exemplo n.º 21
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    def test_jumpToSeefloorSlice(self):
        # Setup
        drifts_df = pd.DataFrame()
        drifts_df = self.__append_to_drifts_df(drifts_df, 93, 0, 0)
        drifts_df = self.__append_to_drifts_df(drifts_df, 95, 0, 16)
        drifts_df = self.__append_to_drifts_df(drifts_df, 100, 0, 16)
        drifts_df = self.__append_to_drifts_df(drifts_df, 102, 0, 16)
        drifts_df = self.__append_to_drifts_df(drifts_df, 98, 0, 16)
        drifts_df = self.__append_to_drifts_df(drifts_df, 104, 0, 16)
        drifts_df = self.__append_to_drifts_df(drifts_df, 107, 0, 16)
        driftData = DriftData(drifts_df)

        badframes_df = pd.DataFrame()
        badframes_df = self.__append_to_badframes_df(badframes_df, 99, 101)
        badframes_df = self.__append_to_badframes_df(badframes_df, 104, 108)
        badframes_df = self.__append_to_badframes_df(badframes_df, 92, 95)
        badframesData = BadFramesData.createFromDataFrame(None, badframes_df)

        #--- good frames are 96,97,98 and 102,103. startFrame is 93, endFrame is 107

        seeFloor = SeeFloor(driftData, badframesData, None, None)

        # Exercise

        # Assert
        self.assertEqual(93, seeFloor.jumpToSeefloorSlice(
            -333, 1))  # if parameter is out of bounds show first/last frame
        self.assertEqual(93, seeFloor.jumpToSeefloorSlice(91, 1))
        self.assertEqual(93, seeFloor.jumpToSeefloorSlice(92, 1))
        self.assertEqual(96, seeFloor.jumpToSeefloorSlice(93, 1))
        self.assertEqual(96, seeFloor.jumpToSeefloorSlice(94, 1))
        self.assertEqual(96, seeFloor.jumpToSeefloorSlice(95, 1))
        self.assertEqual(98, seeFloor.jumpToSeefloorSlice(96, 1))
        self.assertEqual(98, seeFloor.jumpToSeefloorSlice(97, 1))
        self.assertEqual(102, seeFloor.jumpToSeefloorSlice(98, 1))
        self.assertEqual(102, seeFloor.jumpToSeefloorSlice(99, 1))
        self.assertEqual(102, seeFloor.jumpToSeefloorSlice(100, 1))
        self.assertEqual(102, seeFloor.jumpToSeefloorSlice(101, 1))
        self.assertEqual(103, seeFloor.jumpToSeefloorSlice(102, 1))
        self.assertEqual(107, seeFloor.jumpToSeefloorSlice(103, 1))
        self.assertEqual(107, seeFloor.jumpToSeefloorSlice(104, 1))
        self.assertEqual(107, seeFloor.jumpToSeefloorSlice(105, 1))
        self.assertEqual(107, seeFloor.jumpToSeefloorSlice(106, 1))
        self.assertEqual(107, seeFloor.jumpToSeefloorSlice(107, 1))
        self.assertEqual(107, seeFloor.jumpToSeefloorSlice(108, 1))
        self.assertEqual(107, seeFloor.jumpToSeefloorSlice(
            2222, 1))  # if parameter is out of bounds show first/last frame
        self.assertEqual(107, seeFloor.jumpToSeefloorSlice(109, 1))

        self.assertEqual(93, seeFloor.jumpToSeefloorSlice(
            -333, -1))  # if parameter is out of bounds show first/last frame
        self.assertEqual(93, seeFloor.jumpToSeefloorSlice(
            91, -1))  #<-- out-of-bound frame
        self.assertEqual(93, seeFloor.jumpToSeefloorSlice(
            92, -1))  #<-- out-of-bound frame
        self.assertEqual(93, seeFloor.jumpToSeefloorSlice(
            93, -1))  #<-- 93 is bad frame - its FIRST frame
        self.assertEqual(93, seeFloor.jumpToSeefloorSlice(
            94, -1))  #<-- 94 is bad frame
        self.assertEqual(93, seeFloor.jumpToSeefloorSlice(
            95, -1))  #<-- 95 is bad frame
        self.assertEqual(93, seeFloor.jumpToSeefloorSlice(96, -1))
        self.assertEqual(96, seeFloor.jumpToSeefloorSlice(97, -1))
        self.assertEqual(96, seeFloor.jumpToSeefloorSlice(98, -1))
        self.assertEqual(98, seeFloor.jumpToSeefloorSlice(
            99, -1))  #<-- 99 is bad frame
        self.assertEqual(98, seeFloor.jumpToSeefloorSlice(
            100, -1))  #<-- 100 is bad frame
        self.assertEqual(98, seeFloor.jumpToSeefloorSlice(
            101, -1))  #<-- 101 is bad frame
        self.assertEqual(98, seeFloor.jumpToSeefloorSlice(102, -1))
        self.assertEqual(102, seeFloor.jumpToSeefloorSlice(103, -1))
        self.assertEqual(103, seeFloor.jumpToSeefloorSlice(
            104, -1))  #<-- 104 is bad frame
        self.assertEqual(103, seeFloor.jumpToSeefloorSlice(
            105, -1))  #<-- 105 is bad frame
        self.assertEqual(103, seeFloor.jumpToSeefloorSlice(
            106, -1))  #<-- 106 is bad frame
        self.assertEqual(103, seeFloor.jumpToSeefloorSlice(
            107, -1))  #<-- 107 is bad frame - its LAST frame
        self.assertEqual(107, seeFloor.jumpToSeefloorSlice(
            108, -1))  #<-- out-of-bound frame
        self.assertEqual(107, seeFloor.jumpToSeefloorSlice(
            2222, -1))  #<-- out-of-bound frame
        self.assertEqual(107, seeFloor.jumpToSeefloorSlice(
            109, -1))  #<-- out-of-bound frame
Exemplo n.º 22
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    def test_jumpToSeefloorSlice_multiSlice_goingDownward(self):
        # Setup
        pixels_in_frame = Frame.FRAME_HEIGHT
        pixels_in_half_frame = int(pixels_in_frame / 2)

        drifts_df = pd.DataFrame()
        drifts_df = self.__append_to_drifts_df(drifts_df, 100, 0, 0)
        drifts_df = self.__append_to_drifts_df(drifts_df, 200, 0,
                                               pixels_in_half_frame)
        drifts_df = self.__append_to_drifts_df(drifts_df, 300, 0,
                                               pixels_in_half_frame)
        drifts_df = self.__append_to_drifts_df(drifts_df, 400, 0,
                                               pixels_in_half_frame)
        drifts_df = self.__append_to_drifts_df(drifts_df, 500, 0,
                                               pixels_in_half_frame)
        drifts_df = self.__append_to_drifts_df(drifts_df, 600, 0,
                                               pixels_in_half_frame)
        drifts_df = self.__append_to_drifts_df(drifts_df, 700, 0,
                                               pixels_in_half_frame)
        driftData = DriftData(drifts_df)

        badframes_df = pd.DataFrame()
        badframes_df = self.__append_to_badframes_df(badframes_df, 90, 149)
        badframes_df = self.__append_to_badframes_df(badframes_df, 575, 624)
        badframes_df = self.__append_to_badframes_df(badframes_df, 690, 790)
        badframesData = BadFramesData.createFromDataFrame(None, badframes_df)

        #--- good frames are 150-574 and 625-689. startFrame is 100, endFrame is 700

        seeFloor = SeeFloor(driftData, badframesData, None, None)

        # Exercise
        # Assert
        self.assertEqual(100, seeFloor.jumpToSeefloorSlice(
            10, -1))  # if parameter is out of bounds show first/last frame
        self.assertEqual(100, seeFloor.jumpToSeefloorSlice(99, -1))
        self.assertEqual(100, seeFloor.jumpToSeefloorSlice(100, -1))
        self.assertEqual(100, seeFloor.jumpToSeefloorSlice(101, -1))
        self.assertEqual(100, seeFloor.jumpToSeefloorSlice(149, -1))
        self.assertEqual(100, seeFloor.jumpToSeefloorSlice(150, -1))
        self.assertEqual(150, seeFloor.jumpToSeefloorSlice(151, -1))
        self.assertEqual(150, seeFloor.jumpToSeefloorSlice(175, -1))
        self.assertEqual(150, seeFloor.jumpToSeefloorSlice(348, -1))
        self.assertEqual(150, seeFloor.jumpToSeefloorSlice(349, -1))
        self.assertEqual(151, seeFloor.jumpToSeefloorSlice(350, -1))
        self.assertEqual(152, seeFloor.jumpToSeefloorSlice(351, -1))
        self.assertEqual(374, seeFloor.jumpToSeefloorSlice(573, -1))
        self.assertEqual(375, seeFloor.jumpToSeefloorSlice(574, -1))  #<--- ??
        self.assertEqual(574, seeFloor.jumpToSeefloorSlice(575, -1))
        self.assertEqual(574, seeFloor.jumpToSeefloorSlice(576, -1))
        self.assertEqual(574, seeFloor.jumpToSeefloorSlice(623, -1))
        self.assertEqual(574, seeFloor.jumpToSeefloorSlice(624, -1))
        self.assertEqual(574, seeFloor.jumpToSeefloorSlice(625, -1))
        self.assertEqual(625, seeFloor.jumpToSeefloorSlice(626, -1))
        self.assertEqual(625, seeFloor.jumpToSeefloorSlice(627, -1))
        self.assertEqual(625, seeFloor.jumpToSeefloorSlice(687, -1))
        self.assertEqual(625, seeFloor.jumpToSeefloorSlice(688, -1))
        self.assertEqual(625, seeFloor.jumpToSeefloorSlice(689, -1))
        self.assertEqual(689, seeFloor.jumpToSeefloorSlice(690, -1))
        self.assertEqual(689, seeFloor.jumpToSeefloorSlice(691, -1))
        self.assertEqual(689, seeFloor.jumpToSeefloorSlice(699, -1))
        self.assertEqual(689, seeFloor.jumpToSeefloorSlice(700, -1))
        self.assertEqual(700, seeFloor.jumpToSeefloorSlice(701, -1))
        self.assertEqual(700, seeFloor.jumpToSeefloorSlice(702, -1))

        self.assertEqual(100, seeFloor.jumpToSeefloorSlice(
            10, -2))  # if parameter is out of bounds show first/last frame
        self.assertEqual(100, seeFloor.jumpToSeefloorSlice(99, -2))

        # step 1 is to jump over bad block, step 2 is to jump 200 frames
        self.assertEqual(375, seeFloor.jumpToSeefloorSlice(600, -2))
        self.assertEqual(375, seeFloor.jumpToSeefloorSlice(575, -2))

        #TODO: why 176 and not 175? where did extra 1 come from
        self.assertEqual(176, seeFloor.jumpToSeefloorSlice(
            574, -2))  #<--- why 176 and not 175? where did extra 1 come from
        self.assertEqual(175, seeFloor.jumpToSeefloorSlice(573, -2))

        #TODO:fix test cases below
        # normal 2 jumps without any bad blocks in the middle
        self.assertEqual(152, seeFloor.jumpToSeefloorSlice(550, -2))
        self.assertEqual(151, seeFloor.jumpToSeefloorSlice(549, -2))
        self.assertEqual(150, seeFloor.jumpToSeefloorSlice(548, -2))
        self.assertEqual(150, seeFloor.jumpToSeefloorSlice(547, -2))
        self.assertEqual(
            150, seeFloor.jumpToSeefloorSlice(546, -2)
        )  #<-- ?? why diff input but same output. Who is rounding where?
        self.assertEqual(
            150, seeFloor.jumpToSeefloorSlice(545, -2)
        )  #<-- ?? why diff input but same output. Who is rounding where?
        self.assertEqual(
            150, seeFloor.jumpToSeefloorSlice(351, -2)
        )  #<-- ?? why diff input but same output. Who is rounding where?
        self.assertEqual(150, seeFloor.jumpToSeefloorSlice(350, -2))
        self.assertEqual(
            100, seeFloor.jumpToSeefloorSlice(349, -2)
        )  #<-- ?? why diff input but same output. Who is rounding where?
        self.assertEqual(100, seeFloor.jumpToSeefloorSlice(348, -2))
        self.assertEqual(100, seeFloor.jumpToSeefloorSlice(348, -2))
        self.assertEqual(100, seeFloor.jumpToSeefloorSlice(152, -2))
        self.assertEqual(100, seeFloor.jumpToSeefloorSlice(151, -2))
        self.assertEqual(100, seeFloor.jumpToSeefloorSlice(150, -2))
        self.assertEqual(100, seeFloor.jumpToSeefloorSlice(149, -2))
        self.assertEqual(100, seeFloor.jumpToSeefloorSlice(148, -2))
        self.assertEqual(100, seeFloor.jumpToSeefloorSlice(147, -2))
        self.assertEqual(100, seeFloor.jumpToSeefloorSlice(103, -2))
        self.assertEqual(100, seeFloor.jumpToSeefloorSlice(102, -2))
        self.assertEqual(100, seeFloor.jumpToSeefloorSlice(101, -2))
        self.assertEqual(100, seeFloor.jumpToSeefloorSlice(100, -2))
        self.assertEqual(100, seeFloor.jumpToSeefloorSlice(99, -2))
        self.assertEqual(100, seeFloor.jumpToSeefloorSlice(98, -2))
        self.assertEqual(100, seeFloor.jumpToSeefloorSlice(92, -2))
        self.assertEqual(100, seeFloor.jumpToSeefloorSlice(91, -2))
        self.assertEqual(100, seeFloor.jumpToSeefloorSlice(90, -2))
        self.assertEqual(100, seeFloor.jumpToSeefloorSlice(89, -2))
        self.assertEqual(100, seeFloor.jumpToSeefloorSlice(88, -2))

        # jump #1 is 200 frames, then second jump is shorter to the last good frame before bad block

        self.assertEqual(689, seeFloor.jumpToSeefloorSlice(700, -1))
        self.assertEqual(625, seeFloor.jumpToSeefloorSlice(700, -2))
        self.assertEqual(574, seeFloor.jumpToSeefloorSlice(700, -3))
        self.assertEqual(375, seeFloor.jumpToSeefloorSlice(700, -4))
        self.assertEqual(176, seeFloor.jumpToSeefloorSlice(
            700, -5))  #<-- ?? why not 175?
        self.assertEqual(150, seeFloor.jumpToSeefloorSlice(700, -6))
        self.assertEqual(100, seeFloor.jumpToSeefloorSlice(700, -7))
        self.assertEqual(100, seeFloor.jumpToSeefloorSlice(700, -8))

        self.assertEqual(176, seeFloor.jumpToSeefloorSlice(699, -5))
        self.assertEqual(176, seeFloor.jumpToSeefloorSlice(698, -5))

        self.assertEqual(700, seeFloor.jumpToSeefloorSlice(701, -1))
        self.assertEqual(700, seeFloor.jumpToSeefloorSlice(701, -2))
        self.assertEqual(700, seeFloor.jumpToSeefloorSlice(701, -3))
        self.assertEqual(700, seeFloor.jumpToSeefloorSlice(702, -3))
Exemplo n.º 23
0
    def test_jumpToSeefloorSlice_multiSlice_goingUpward(self):
        # Setup
        pixels_in_frame = Frame.FRAME_HEIGHT
        pixels_in_half_frame = int(pixels_in_frame / 2)

        drifts_df = pd.DataFrame()
        drifts_df = self.__append_to_drifts_df(drifts_df, 100, 0, 0)
        drifts_df = self.__append_to_drifts_df(drifts_df, 200, 0,
                                               pixels_in_half_frame)
        drifts_df = self.__append_to_drifts_df(drifts_df, 300, 0,
                                               pixels_in_half_frame)
        drifts_df = self.__append_to_drifts_df(drifts_df, 400, 0,
                                               pixels_in_half_frame)
        drifts_df = self.__append_to_drifts_df(drifts_df, 500, 0,
                                               pixels_in_half_frame)
        drifts_df = self.__append_to_drifts_df(drifts_df, 600, 0,
                                               pixels_in_half_frame)
        drifts_df = self.__append_to_drifts_df(drifts_df, 700, 0,
                                               pixels_in_half_frame)
        driftData = DriftData(drifts_df)

        badframes_df = pd.DataFrame()
        badframes_df = self.__append_to_badframes_df(badframes_df, 90, 149)
        badframes_df = self.__append_to_badframes_df(badframes_df, 575, 624)
        badframes_df = self.__append_to_badframes_df(badframes_df, 690, 790)
        badframesData = BadFramesData.createFromDataFrame(None, badframes_df)

        #--- good frames are 150-574 and 625-689. startFrame is 100, endFrame is 700

        seeFloor = SeeFloor(driftData, badframesData, None, None)

        # Exercise
        # Assert

        self.assertEqual(510, seeFloor.jumpToSeefloorSlice(500, 0.05))
        self.assertEqual(560, seeFloor.jumpToSeefloorSlice(500, 0.30))
        self.assertEqual(561, seeFloor.jumpToSeefloorSlice(500, 0.305))
        self.assertEqual(563, seeFloor.jumpToSeefloorSlice(500, 0.31))
        self.assertEqual(565, seeFloor.jumpToSeefloorSlice(500, 0.32))
        self.assertEqual(567, seeFloor.jumpToSeefloorSlice(500, 0.33))
        self.assertEqual(569, seeFloor.jumpToSeefloorSlice(500, 0.34))
        self.assertEqual(571, seeFloor.jumpToSeefloorSlice(500, 0.35))
        self.assertEqual(573, seeFloor.jumpToSeefloorSlice(500, 0.36))
        self.assertEqual(574, seeFloor.jumpToSeefloorSlice(500, 0.37))
        self.assertEqual(574, seeFloor.jumpToSeefloorSlice(500, 0.38))  #??
        self.assertEqual(574, seeFloor.jumpToSeefloorSlice(500, 0.39))  #??
        self.assertEqual(574, seeFloor.jumpToSeefloorSlice(500, 1))
        self.assertEqual(625, seeFloor.jumpToSeefloorSlice(500, 1.1))
        self.assertEqual(625, seeFloor.jumpToSeefloorSlice(500, 1.36))  #??
        self.assertEqual(625, seeFloor.jumpToSeefloorSlice(500, 1.39))  #??
        self.assertEqual(625, seeFloor.jumpToSeefloorSlice(500, 1.34))  #??
        self.assertEqual(625, seeFloor.jumpToSeefloorSlice(500, 2))  #??
        self.assertEqual(646, seeFloor.jumpToSeefloorSlice(500, 2.1))  #??

        self.assertEqual(100, seeFloor.jumpToSeefloorSlice(
            10, 1))  # if parameter is out of bounds show first/last frame
        self.assertEqual(100, seeFloor.jumpToSeefloorSlice(99, 1))
        self.assertEqual(150, seeFloor.jumpToSeefloorSlice(100, 1))
        self.assertEqual(150, seeFloor.jumpToSeefloorSlice(101, 1))
        self.assertEqual(150, seeFloor.jumpToSeefloorSlice(149, 1))
        self.assertEqual(350, seeFloor.jumpToSeefloorSlice(150, 1))
        self.assertEqual(352, seeFloor.jumpToSeefloorSlice(151, 1))  #<>>>
        self.assertEqual(353, seeFloor.jumpToSeefloorSlice(152, 1))  #<>>>
        self.assertEqual(375, seeFloor.jumpToSeefloorSlice(175, 1))
        self.assertEqual(574, seeFloor.jumpToSeefloorSlice(572, 1))
        self.assertEqual(574, seeFloor.jumpToSeefloorSlice(573, 1))
        self.assertEqual(625, seeFloor.jumpToSeefloorSlice(574, 1))
        self.assertEqual(625, seeFloor.jumpToSeefloorSlice(575, 1))
        self.assertEqual(625, seeFloor.jumpToSeefloorSlice(623, 1))
        self.assertEqual(625, seeFloor.jumpToSeefloorSlice(624, 1))
        self.assertEqual(689, seeFloor.jumpToSeefloorSlice(625, 1))
        self.assertEqual(689, seeFloor.jumpToSeefloorSlice(626, 1))
        self.assertEqual(689, seeFloor.jumpToSeefloorSlice(627, 1))
        self.assertEqual(689, seeFloor.jumpToSeefloorSlice(687, 1))
        self.assertEqual(689, seeFloor.jumpToSeefloorSlice(688, 1))
        self.assertEqual(700, seeFloor.jumpToSeefloorSlice(689, 1))
        self.assertEqual(700, seeFloor.jumpToSeefloorSlice(690, 1))
        self.assertEqual(700, seeFloor.jumpToSeefloorSlice(691, 1))
        self.assertEqual(700, seeFloor.jumpToSeefloorSlice(699, 1))
        self.assertEqual(700, seeFloor.jumpToSeefloorSlice(700, 1))
        self.assertEqual(700, seeFloor.jumpToSeefloorSlice(701, 1))
        self.assertEqual(700, seeFloor.jumpToSeefloorSlice(702, 1))

        self.assertEqual(100, seeFloor.jumpToSeefloorSlice(
            10, 2))  # if parameter is out of bounds show first/last frame
        self.assertEqual(100, seeFloor.jumpToSeefloorSlice(99, 2))

        # step 1 is to jump over bad block, step 2 is to jump 200 frames
        self.assertEqual(350, seeFloor.jumpToSeefloorSlice(100, 2))
        self.assertEqual(350, seeFloor.jumpToSeefloorSlice(101, 2))
        self.assertEqual(350, seeFloor.jumpToSeefloorSlice(149, 2))

        # normal 2 jumps without any bad blocks in the middle
        self.assertEqual(550, seeFloor.jumpToSeefloorSlice(150, 2))
        self.assertEqual(553, seeFloor.jumpToSeefloorSlice(151, 2))
        self.assertEqual(554, seeFloor.jumpToSeefloorSlice(152, 2))
        self.assertEqual(555, seeFloor.jumpToSeefloorSlice(153, 2))
        self.assertEqual(555, seeFloor.jumpToSeefloorSlice(
            154,
            2))  #<-- ?? why diff input but same output. Who is rounding where?
        self.assertEqual(555, seeFloor.jumpToSeefloorSlice(
            155,
            2))  #<-- ?? why diff input but same output. Who is rounding where?
        self.assertEqual(558, seeFloor.jumpToSeefloorSlice(156, 2))
        self.assertEqual(559, seeFloor.jumpToSeefloorSlice(157, 2))
        self.assertEqual(560, seeFloor.jumpToSeefloorSlice(158, 2))
        self.assertEqual(560, seeFloor.jumpToSeefloorSlice(
            159,
            2))  #<-- ?? why diff input but same output. Who is rounding where?
        self.assertEqual(560, seeFloor.jumpToSeefloorSlice(
            160,
            2))  #<-- ?? why diff input but same output. Who is rounding where?

        # jump #1 is 200 frames, then second jump is shorter to the last good frame before bad block

        self.assertEqual(574, seeFloor.jumpToSeefloorSlice(172, 2))
        self.assertEqual(574, seeFloor.jumpToSeefloorSlice(173, 2))
        self.assertEqual(574, seeFloor.jumpToSeefloorSlice(174, 2))  #<-- ??
        self.assertEqual(574, seeFloor.jumpToSeefloorSlice(175, 2))  #<-- ??
        self.assertEqual(574, seeFloor.jumpToSeefloorSlice(176, 2))
        self.assertEqual(574, seeFloor.jumpToSeefloorSlice(177, 2))
        self.assertEqual(574, seeFloor.jumpToSeefloorSlice(178, 2))
        self.assertEqual(574, seeFloor.jumpToSeefloorSlice(179, 2))
        self.assertEqual(574, seeFloor.jumpToSeefloorSlice(180, 2))

        self.assertEqual(625, seeFloor.jumpToSeefloorSlice(180, 3))
        self.assertEqual(689, seeFloor.jumpToSeefloorSlice(180, 4))
        self.assertEqual(700, seeFloor.jumpToSeefloorSlice(180, 5))
Exemplo n.º 24
0
    folderStruct = FolderStructure(rootDir, videoFileName)

StreamToLogger(folderStruct.getLogFilepath())
print("Starting markCrabs script")

timer = MyTimer("Starting MarkCrabs")

videoStream = VideoStream(folderStruct.getVideoFilepath())
timer.lap("Initialized VideoStream")

interpolator = InterpolateController(folderStruct)
interpolator.regenerateSeefloor()
timer.lap("Interpolated Seefloor")

driftData = DriftData.createFromFolderStruct(folderStruct)
timer.lap("Initialized DriftData")

imageWin = ImageWindow("mainWindow", Point(700, 200))
timer.lap("Initialized ImageWindow")

scientistUI = ScientistUI(imageWin, folderStruct, videoStream, driftData)
timer.lap("Initialized ScientistUI")

#Uncomment two lines below to get a nice summary which function uses the most time during excecution
#import cProfile
#cProfile.run('scientistUI.processVideo()')

scientistUI.processVideo()

timer.lap("Finished session")