def extract_single_river_from_source():
# Here are the different parameters and their default value fr this script
default_param = AGPD.get_common_default_param()
default_param["already_preprocessed"] = False
default_param["X"] = 0
default_param["Y"] = 0
default_param["output_name"] = "Single_River"
default_param = AGPD.ingest_param(default_param, sys.argv)
if (default_param["help"] or len(sys.argv) == 1):
print("""
This command-line tool preprocess your raster to the right format and remove elevation below a threshold, typically the sea.
Quick example: lsdtt-extract-single-river file=test_raster.tif X=592149.7 Y=4103817.2
Option available:
file: name of the raster (file=name.tif)
path: path to the file (default = current folder)
already_preprocessed (default = False): Add the keyword if your raster is already preprocessed for flow analysis, False if it needs preprocessing. To get more control on the preprocessing you can use lsdtt-depressions command.
X: Easting/X coordinate of the source
Y: Easting/Y coordinate of the source
output_name (default = Single_River): prefix of the ouput(s) files.
Future improvements:
- Automatic plotting of base statistic
- Adding Chi/ksn/gradient options
""")
quit()
print(
"This command-line tool extract a single river from a DEM from the XY coordinates of the source"
)
print("Loading the dem")
mydem = LSDDEM(file_name=default_param["file"],
path=default_param["path"],
already_preprocessed=bool(
default_param["already_preprocessed"]),
verbose=True)
if (bool(default_param["already_preprocessed"]) == False):
print(
"I am preprocessing your dem (carving + filling), if you have already done that, you can save time by adding the option already_preprocessed=True to the command line (it saves time)"
)
mydem.PreProcessing()
river = pd.DataFrame(
mydem.ExtractSingleRiverFromSource(float(default_param["X"]),
float(default_param["Y"])))
river.to_csv("%s.csv" % (default_param["output_name"]), index=False)
def concavity_FFS_down_to_top():
# Here are the different parameters and their default value fr this script
default_param = AGPD.get_common_default_param()
default_param["already_preprocessed"] = False
default_param["save_XY_array"] = False
default_param["X_source"] = None
default_param["Y_source"] = None
default_param["min_elevation"] = None
default_param["area_threshold"] = None
default_param["flow_distance_step"] = None
default_param["min_DA"] = None
default_param["prefix"] = ""
default_param = AGPD.ingest_param(default_param, sys.argv)
if (default_param["help"] or len(sys.argv) == 1 or "help" in sys.argv):
print("""
This command-line tool run concavity analysis tools from LSDTopoTools.
Description of the algorithms in Mudd et al., 2018 -> https://www.earth-surf-dynam.net/6/505/2018/
To use, run the script with relevant options, for example:
lsdtt-concavity-down-to-top file=myraster.tif ---
option available:
file: name of the raster (file=name.tif)
path: path to the file (default = current folder)
todo
help: if written, diplay this message. Documentation soon to be written.
""")
quit()
try:
default_param["X_source"] = float(default_param["X_source"])
default_param["Y_source"] = float(default_param["Y_source"])
default_param["min_elevation"] = float(default_param["min_elevation"])
default_param["area_threshold"] = float(
default_param["area_threshold"])
default_param["flow_distance_step"] = float(
default_param["flow_distance_step"])
default_param["min_DA"] = float(default_param["min_DA"])
except:
print(default_param)
print(
"I struggle to understand your input parameters: make sure I can convert them to number"
)
raise SystemExit("I need to quit now")
mydem = LSDDEM(file_name=default_param["file"],
path=default_param["path"],
already_preprocessed=default_param["already_preprocessed"],
remove_seas=True,
sea_level=default_param["min_elevation"])
if (default_param["already_preprocessed"] == False):
print(
"I am preprocessing your raster with default options, see lsdtt-depressions for extended options."
)
print(
"Command line tools can load already processed rasters with the keyword already_preprocessed"
)
mydem.PreProcessing()
# flwo routines
print("Processing flow routines with d8 algorithm")
mydem.CommonFlowRoutines()
print("Extracting the river")
river = mydem.ExtractSingleRiverFromSource(default_param["X_source"],
default_param["Y_source"])
river = pd.DataFrame(river)
print("Saving teh river to csv file: river_for_concavity.csv")
river.to_csv("%sriver_for_concavity.csv" % (default_param["prefix"]),
index=False)
print("Initialising the concavity analysis")
river.sort_values("elevation", inplace=True)
river.reset_index(drop=True, inplace=True)
# OUtputs
global_results = {}
outlet_info = {
"X": [],
"Y": [],
"elevation": [],
"flow_distance": [],
"drainage_area": []
}
# potential saving of basins
XY_basins = {}
flow_distance_this = river["flow_distance"].min()
index_this = river["flow_distance"].idxmin()
while (flow_distance_this < river["flow_distance"].max()
and river["drainage_area"][index_this] > default_param["min_DA"]):
print("processing flow distance =", flow_distance_this)
del mydem
mydem = LSDDEM(file_name="%sdem_for_concavity.tif" %
(default_param["prefix"]),
already_preprocessed=True,
remove_seas=True,
sea_level=river["elevation"][index_this] - 5)
mydem.CommonFlowRoutines()
# mydem.save_array_to_raster_extent(mydem.cppdem.get_DA_raster(), name = "DA", save_directory = "./")
mydem.ExtractRiverNetwork(
area_threshold_min=default_param["area_threshold"])
# print(river.iloc[index_this])
mydem.DefineCatchment(method="from_XY",
X_coords=[river["X"][index_this]],
Y_coords=[river["Y"][index_this]],
coord_search_radius_nodes=0)
mydem.GenerateChi()
print(mydem.df_base_river["source_key"].unique())
mydem.cppdem.calculate_movern_disorder(0.05, 0.05, 19, 1,
default_param["area_threshold"])
all_disorder = mydem.cppdem.get_best_fits_movern_per_BK()
global_results[str(round(
river["flow_distance"][index_this], 2))] = np.array(
all_disorder[0]
) # [0] means basin 0, which is normal as I only have one
outlet_info["X"].append(river["X"][index_this])
outlet_info["Y"].append(river["Y"][index_this])
outlet_info["elevation"].append(river["elevation"][index_this])
outlet_info["flow_distance"].append(
round(river["flow_distance"][index_this], 2))
outlet_info["drainage_area"].append(river["drainage_area"][index_this])
# New index
flow_distance_this += default_param["flow_distance_step"]
index_this = river.index[
river["flow_distance"] >= flow_distance_this].values[0]
np.savez("%sdown_to_top_conc.npz" % (default_param["prefix"]),
**global_results)
pd.DataFrame(outlet_info).to_csv("%sdown_to_top_conc_basin_info.csv" %
(default_param["prefix"]),
index=False)
if (default_param["save_XY_array"]):
this_basin = mydem.cppdem.query_xy_for_each_basin()[
0] # [0] because I want a single basin there
print(this_basin)
XY_basins[str(round(river["flow_distance"][index_this],
2))] = this_basin
np.savez(default_param["prefix"] + "down_to_top_basins_XY.npz",
**XY_basins)