def test_contstruct(self):
jid = uuid.UUID('986917b1-66a8-42c2-8f77-00be28793e58')
pid = uuid.UUID('83198655-b287-427f-af0d-c6bc1ca566d8')
created_at = datetime.datetime(2012, 11, 14, 10, 48, 26, 504478)
url = u'http://localhost:9998/job/70a00fe2-f698-41ed-b28c-b37c22f10440'
j = user.JobMeta(
jid,
u'bob',
description=u'My desc',
parentjobid=pid,
state=u'RUNNING',
ms_filename=u'F00346.mzxml',
created_at=created_at,
launcher_url=url,
)
self.assertEqual(j.jobid, jid)
self.assertEqual(j.owner, u'bob')
self.assertEqual(j.description, u'My desc')
self.assertEqual(j.ms_filename, u'F00346.mzxml')
self.assertEqual(j.parentjobid, pid)
self.assertEqual(j.state, u'RUNNING')
self.assertEqual(j.created_at, created_at)
self.assertEqual(j.launcher_url, url)
def test_delete(self):
jid = uuid.UUID('986917b1-66a8-42c2-8f77-00be28793e58')
job_in = user.JobMeta(jid, u'bob')
user.JobMeta.add(job_in)
user.JobMeta.delete(job_in)
self.assertEqual(self.session.query(user.JobMeta).count(), 0)
def test_by_id(self):
jid = uuid.UUID('986917b1-66a8-42c2-8f77-00be28793e58')
job_in = user.JobMeta(jid, u'bob')
user.JobMeta.add(job_in)
job_out = user.JobMeta.by_id(jid)
self.assertEqual(job_out, job_in)
def test_jobs(self):
init_user_db()
session = user.DBSession()
u = user.User(u'bob', u'Bob Smith', u'*****@*****.**')
session.add(u)
job_id = uuid.UUID('11111111-1111-1111-1111-111111111111')
j = user.JobMeta(job_id, u'bob')
session.add(j)
u2 = user.User.by_id(u'bob') # force commit
self.assertEqual(u2.jobs, [j])
destroy_user_db()
def test_contruct_minimal(self, mock_dt):
jid = uuid.UUID('986917b1-66a8-42c2-8f77-00be28793e58')
created_at = datetime.datetime(2012, 11, 14, 10, 48, 26, 504478)
mock_dt.utcnow.return_value = created_at
j = user.JobMeta(jid, u'bob')
self.assertEqual(j.jobid, jid)
self.assertEqual(j.owner, u'bob')
self.assertEqual(j.description, u'')
self.assertEqual(j.ms_filename, u'')
self.assertIsNone(j.parentjobid)
self.assertEqual(j.state, u'STOPPED')
self.assertEqual(j.created_at, created_at)
self.assertEqual(j.launcher_url, u'')
def setUp(self):
import tempfile
self.root_dir = tempfile.mkdtemp()
self.factory = JobFactory(root_dir=self.root_dir,
submit_url='http://localhost:9998/job',
)
# fill user db
transaction.begin()
engine = create_engine('sqlite:///:memory:')
mu.DBSession.configure(bind=engine)
mu.Base.metadata.create_all(engine) # @UndefinedVariable
mu.DBSession().add(mu.User(u'bob', u'Bob', u'*****@*****.**'))
jobid = uuid.UUID('3ad25048-26f6-11e1-851e-00012e260790')
mu.DBSession().add(mu.JobMeta(jobid, owner=u'bob'))
def setUp(self):
self.config = testing.setUp()
self.config.add_static_view('static', 'magmaweb:static')
self.request = testing.DummyRequest()
self.request.registry.settings = {
'extjsroot': 'extjsroot',
'jobfactory.root_dir': '/somedir',
'monitor_user': '******',
}
init_user_db()
self.session = user.DBSession()
u = user.User(u'me', u'My', u'myself')
self.session.add(u)
job_id = uuid.UUID('11111111-1111-1111-1111-111111111111')
j = user.JobMeta(job_id, u'me', description=u'My job')
self.session.add(j)
def setUp(self):
import tempfile
self.parentjobid = uuid.UUID('22222222-2222-2222-2222-222222222222')
self.jobid = uuid.UUID('11111111-1111-1111-1111-111111111111')
self.created_at = datetime.datetime(2012, 11, 14, 10, 48, 26, 504478)
self.meta = mu.JobMeta(jobid=self.jobid,
description=u"My desc",
state=u'STOPPED',
parentjobid=self.parentjobid,
owner=u'bob',
created_at=self.created_at,
ms_filename=u'F1234.mzxml',
is_public=False,
)
self.db = Mock(JobDb)
self.jobdir = tempfile.mkdtemp()
stderr = open(os.path.join(self.jobdir, 'stderr.txt'), 'w')
stderr.write('Error log')
stderr.close()
stdout = open(os.path.join(self.jobdir, 'stdout.txt'), 'w')
stdout.write('Log')
stdout.close()
self.job = Job(self.meta, self.jobdir, self.db)
def test_add(self):
jid = uuid.UUID('986917b1-66a8-42c2-8f77-00be28793e58')
j = user.JobMeta(jid, 'bob')
user.JobMeta.add(j)
self.assertEqual(self.session.query(user.JobMeta).count(), 1)
