class PasScan_Test(unittest.TestCase):
def setUp(self):
self.esc = PasScan('data/hgex')
def test_itermatch(self):
assert [m for m in self.esc.itermatch('CCCAAA', '+')] == []
assert [m for m in self.esc.itermatch('AATAAA', '+')] == [(0, 6)]
assert [m for m in self.esc.itermatch('ATTAAA', '+')] == [(0, 6)]
assert [m for m in self.esc.itermatch('AATAAAAGTAAA', '+')] == [(0, 12)]
assert [m for m in self.esc.itermatch('AATAAACCAGTAAA', '+')] == [(0, 6), (8, 14)]
assert [m for m in self.esc.itermatch('AATAAATAAA', '+')] == [(0, 6)]
def setUp(self):
self.esc = PasScan('data/hgex')
