def rec2csv(rec_array, csv_file, formatd=None, **kwargs):
"""
Convenience wrapper function on top of mlab.rec2csv to allow fixed-
precision output to CSV files
Parameters
----------
rec_aray : numpy 1-d recarray
The recarray to be written out
csv_file : str
CSV file name
kwargs : dict
Keyword arguments to pass through to mlab.rec2csv
Returns
-------
None
"""
# Get the formatd objects associated with each field
formatd = mlab.get_formatd(rec_array, formatd)
# For all FormatFloat objects, switch to FormatDecimal objects
for (k, v) in formatd.iteritems():
if isinstance(v, mlab.FormatFloat):
formatd[k] = FormatDecimal()
# Pass this specification to mlab.rec2csv
mlab.rec2csv(rec_array, csv_file, formatd=formatd, **kwargs)
"""
generate an editable gtk treeview widget for record arrays with custom
formatting of the cells and show how to limit string entries to a list
of strings
"""
import gtk
import numpy as np
import matplotlib.mlab as mlab
import mpl_toolkits.gtktools as gtktools
r = mlab.csv2rec('data/demodata.csv', converterd={'weekdays': str})
formatd = mlab.get_formatd(r)
formatd['date'] = mlab.FormatDate('%Y-%m-%d')
formatd['prices'] = mlab.FormatMillions(precision=1)
formatd['gain'] = mlab.FormatPercent(precision=2)
# use a drop down combo for weekdays
stringd = dict(weekdays=['Sun', 'Mon', 'Tue', 'Wed', 'Thu', 'Fri', 'Sat'])
constant = ['clientid'] # block editing of this field
liststore = gtktools.RecListStore(r, formatd=formatd, stringd=stringd)
treeview = gtktools.RecTreeView(liststore, constant=constant)
def mycallback(liststore, rownum, colname, oldval, newval):
print 'verify: old=%s, new=%s, rec=%s' % (oldval, newval,
liststore.r[rownum][colname])
liststore.callbacks.connect('cell_changed', mycallback)
def __init__(self, r, formatd=None, stringd=None):
"""
r is a numpy record array
formatd is a dict mapping dtype name to mlab.FormatObj instances
stringd, if not None, is a dict mapping dtype names to a list of
valid strings for a combo drop down editor
"""
if stringd is None:
stringd = dict()
if formatd is None:
formatd = mlab.get_formatd(r)
self.stringd = stringd
self.callbacks = cbook.CallbackRegistry(['cell_changed'])
self.r = r
self.headers = r.dtype.names
self.formats = [
gtkformat_factory(formatd.get(name, mlab.FormatObj()), i)
for i, name in enumerate(self.headers)
]
# use the gtk attached versions
self.formatd = formatd = dict(zip(self.headers, self.formats))
types = []
for format in self.formats:
if isinstance(format, mlab.FormatBool):
types.append(gobject.TYPE_BOOLEAN)
else:
types.append(gobject.TYPE_STRING)
self.combod = dict()
if len(stringd):
types.extend([gobject.TYPE_INT] * len(stringd))
keys = stringd.keys()
keys.sort()
valid = set(r.dtype.names)
for ikey, key in enumerate(keys):
assert (key in valid)
combostore = gtk.ListStore(gobject.TYPE_STRING)
for s in stringd[key]:
combostore.append([s])
self.combod[key] = combostore, len(self.headers) + ikey
gtk.ListStore.__init__(self, *types)
for row in r:
vals = []
for formatter, val in zip(self.formats, row):
if isinstance(formatter, mlab.FormatBool):
vals.append(val)
else:
vals.append(formatter.tostr(val))
if len(stringd):
# todo, get correct index here?
vals.extend([0] * len(stringd))
self.append(vals)
def rec2csv_pretty(r,
fname,
delimiter=',',
formatd=None,
missing='',
missingd=None,
withheader=True,
overwrite_float_precision=True):
"""
Save the data from numpy recarray *r* into a
comma-/space-/tab-delimited file. The record array dtype names
will be used for column headers.
*fname*: can be a filename or a file handle. Support for gzipped
files is automatic, if the filename ends in '.gz'
*withheader*: if withheader is False, do not write the attribute
names in the first row
*overwrite_float_precision*: if True, write out floats as raw, else
use the implied precision of formatd
.. seealso::
:func:`csv2rec`
For information about *missing* and *missingd*, which can
be used to fill in masked values into your CSV file.
"""
if missingd is None:
missingd = dict()
def with_mask(func):
def newfunc(val, mask, mval):
if mask:
return mval
else:
return func(val)
return newfunc
formatd = get_formatd(r, formatd)
funcs = []
for i, name in enumerate(r.dtype.names):
if overwrite_float_precision:
funcs.append(with_mask(csvformat_factory(formatd[name]).tostr))
else:
funcs.append(with_mask(formatd[name].tostr))
fh, opened = cbook.to_filehandle(fname, 'wb', return_opened=True)
writer = csv.writer(fh, delimiter=delimiter)
header = r.dtype.names
if withheader:
writer.writerow(header)
# Our list of specials for missing values
mvals = []
for name in header:
mvals.append(missingd.get(name, missing))
ismasked = False
if len(r):
row = r[0]
ismasked = hasattr(row, '_fieldmask')
for row in r:
if ismasked:
row, rowmask = row.item(), row._fieldmask.item()
else:
rowmask = [False] * len(row)
srow = [
func(val, mask, mval)
for func, val, mask, mval in zip(funcs, row, rowmask, mvals)
]
writer.writerow(srow)
if opened:
fh.close()
