def test_gt(self):
r = ReferenceName('1')
rprefix = ReferenceName('chr1')
r2 = ReferenceName('2')
r2prefix = ReferenceName('chr2')
self.assertTrue(rprefix >= r)
self.assertTrue(r >= rprefix)
self.assertFalse(r > rprefix)
self.assertFalse(rprefix > r)
for chr1, chr2 in itertools.product([r, rprefix], [r2, r2prefix]):
self.assertTrue(chr2 > chr1)
self.assertTrue(chr2 >= chr1)
def test_gt(self):
r = ReferenceName('1')
rprefix = ReferenceName('chr1')
r2 = ReferenceName('2')
r2prefix = ReferenceName('chr2')
assert rprefix >= r
assert r >= rprefix
assert not r > rprefix
assert not rprefix > r
for chr1, chr2 in itertools.product([r, rprefix], [r2, r2prefix]):
assert chr2 > chr1
assert chr2 >= chr1
def test_lt(self):
r = ReferenceName('1')
rprefix = ReferenceName('chr1')
r2 = ReferenceName('2')
r2prefix = ReferenceName('chr2')
assert r <= rprefix
assert not r < rprefix
assert not rprefix < r
assert rprefix <= r
for chr1, chr2 in itertools.product([r, rprefix], [r2, r2prefix]):
assert chr1 < chr2
assert chr1 <= chr2
def test_lt(self):
r = ReferenceName('1')
rprefix = ReferenceName('chr1')
r2 = ReferenceName('2')
r2prefix = ReferenceName('chr2')
self.assertTrue(r <= rprefix)
self.assertFalse(r < rprefix)
self.assertFalse(rprefix < r)
self.assertTrue(rprefix <= r)
for chr1, chr2 in itertools.product([r, rprefix], [r2, r2prefix]):
self.assertTrue(chr1 < chr2)
self.assertTrue(chr1 <= chr2)
def test_obj_comparison(self):
r = ReferenceName('1')
rprefix = ReferenceName('chr1')
r2 = ReferenceName('2')
r2prefix = ReferenceName('chr2')
assert rprefix == r
assert r == rprefix
assert ReferenceName('chr1') == rprefix
assert ReferenceName('1') == r
assert rprefix != r2
assert rprefix != r2prefix
assert r != r2
assert r != r2prefix
assert r == rprefix
assert r != r2prefix
assert not r != rprefix
def test_obj_comparison(self):
r = ReferenceName('1')
rprefix = ReferenceName('chr1')
r2 = ReferenceName('2')
r2prefix = ReferenceName('chr2')
self.assertEqual(r, rprefix)
self.assertEqual(rprefix, r)
self.assertEqual(rprefix, ReferenceName('chr1'))
self.assertEqual(r, ReferenceName('1'))
self.assertNotEqual(r2, rprefix)
self.assertNotEqual(r2prefix, rprefix)
self.assertNotEqual(r2, r)
self.assertNotEqual(r2prefix, r)
self.assertTrue(r == rprefix)
self.assertTrue(r != r2prefix)
self.assertFalse(r != rprefix)
def test_hash(self):
assert ReferenceName('3') in {ReferenceName('3')}
assert ReferenceName('3') in {ReferenceName('chr3')}
def test_alpha_sort(self):
assert ReferenceName('10') < ReferenceName('3')
assert ReferenceName('10') < ReferenceName('chr3')
assert ReferenceName('chr10') < ReferenceName('3')
assert ReferenceName('chr10') < ReferenceName('chr3')
def test_prefixed_vs_naked_str(self):
assert ReferenceName('chr1') == '1'
assert ReferenceName('chr1') != '2'
assert ReferenceName('chr1') == '1'
def test_hash(self):
self.assertTrue(ReferenceName('3') in {ReferenceName('3')})
self.assertTrue(ReferenceName('3') in {ReferenceName('chr3')})
def test_alpha_sort(self):
self.assertTrue(ReferenceName('10') < ReferenceName('3'))
self.assertTrue(ReferenceName('10') < ReferenceName('chr3'))
self.assertTrue(ReferenceName('chr10') < ReferenceName('3'))
self.assertTrue(ReferenceName('chr10') < ReferenceName('chr3'))
def test_prefixed_vs_naked_str(self):
self.assertEqual('1', ReferenceName('chr1'))
self.assertNotEqual('2', ReferenceName('chr1'))
self.assertTrue(ReferenceName('chr1') == '1')