def setUp(self):
self.config = MSDSConfig(localdir=tempfile.mkdtemp())
self.api = MSDataSyncAPI(self.config, msds_log)
self.impl = MSDSImpl(msds_log, self.api)
# method stub
self.api.post_sync_step = dingus.Dingus()
def remove_localdir():
os.rmdir(self.config["localdir"])
self.addCleanup(remove_localdir)
self.rsyncconfig = self.RemoteSyncParamsStub({
"filename1": (False, False), # this file didn't change
"filename2": (False, False), # this file didn't change
"filename3": (False, True), # this file changed
"asdf": (False, True), # this file changed
})
self.filename_id_map = {
"filename1": (1, 10),
"filename2": (2, 20),
"filename3": (3, 30),
"filename4": (4, 40),
}
def test_parse_rsync_changes_cull(self):
"""
Check culling of empty directories from file_changes map.
"""
changes = {
'.': (True, True),
'runs': (True, True),
'runs/2013': (True, True),
'runs/2013/7': (True, True),
'runs/2013/7/475': (True, True),
'runs/2013/7/475/solvent_475-50479.d': (True, True),
'runs/2013/7/475/sweep_475-50563.d': (True, True),
'runs/2013/7/475/sweep_475-50563.d/DATA.MS': (False, False),
'runs/2013/7/475/sweep_475-50563.d/GC.ini': (False, False),
'runs/2013/7/475/sweep_475-50563.d/PRE_POST.INI': (False, False),
'runs/2013/7/475/sweep_475-50563.d/acqmeth.txt': (False, True),
'runs/2013/7/475/sweep_475-50563.d/cnorm.ini': (False, False),
'runs/2013/7/475/sweep_475-50563.d/runstart.txt': (False, False),
'runs/2013/7/475/sweep_475-50563.d/tic_front.csv': (False, False)
}
culled = MSDSImpl.cull_empty_dirs(changes)
culled_files = [f for f, c in culled]
self.assertTrue("runs/2013" in culled_files)
self.assertFalse("runs/2013/7/475/solvent_475-50479.d" in culled_files)
self.assertTrue("runs/2013/7/475/sweep_475-50563.d" in culled_files)
self.assertTrue("runs/2013/7/475/sweep_475-50563.d/DATA.MS" in culled_files)
self.assertTrue("runs/2013/7/475/sweep_475-50563.d/acqmeth.txt" in culled_files)
def test_parse_rsync_changes_propagate(self):
"""
Check propagation of file changes to parent directories.
"""
data = """
.d ./
.d runs/
.d runs/2013/
.d runs/2013/7/
.d runs/2013/7/475/
cd+++++++++ runs/2013/7/475/solvent_475-50479.d/
.d runs/2013/7/475/sweep_475-50563.d/
<f..T...... runs/2013/7/475/sweep_475-50563.d/DATA.MS
<f..T...... runs/2013/7/475/sweep_475-50563.d/GC.ini
<f..T...... runs/2013/7/475/sweep_475-50563.d/PRE_POST.INI
<f+.T...... runs/2013/7/475/sweep_475-50563.d/acqmeth.txt
<f..T...... runs/2013/7/475/sweep_475-50563.d/cnorm.ini
<f..T...... runs/2013/7/475/sweep_475-50563.d/runstart.txt
<f..T...... runs/2013/7/475/sweep_475-50563.d/tic_front.csv
"""
changes = MSDSImpl.parse_rsync_changes(data)
self.assertEqual(changes["runs/2013/7/475/solvent_475-50479.d"],
(True, True),
"runs/2013/7/475/solvent_475-50479.d")
self.assertEqual(changes["runs/2013/7/475/sweep_475-50563.d"],
(True, True),
"runs/2013/7/475/sweep_475-50563.d")
self.assertEqual(changes["runs/2013/7/475/sweep_475-50563.d/DATA.MS"],
(False, False),
"runs/2013/7/475/sweep_475-50563.d/DATA.MS")
self.assertEqual(changes["runs/2013/7/475/sweep_475-50563.d/acqmeth.txt"],
(False, True),
"runs/2013/7/475/solvent_475-50479.d/acqmeth.txt")
def test_parse_rsync_changes_empty_dir(self):
"""
Check parsing of rsync output -- changed and unchanged files
and directories.
"""
data = """
.d ./
.d runs/
.d runs/2013/
.d runs/2013/7/
.d runs/2013/7/475/
cd+++++++++ runs/2013/7/475/solvent_475-50479.d/
.d runs/2013/7/475/sweep_475-50563.d/
<f..T...... runs/2013/7/475/sweep_475-50563.d/DATA.MS
<f..T...... runs/2013/7/475/sweep_475-50563.d/GC.ini
<f..T...... runs/2013/7/475/sweep_475-50563.d/PRE_POST.INI
<f..T...... runs/2013/7/475/sweep_475-50563.d/acqmeth.txt
<f..T...... runs/2013/7/475/sweep_475-50563.d/cnorm.ini
<f..T...... runs/2013/7/475/sweep_475-50563.d/runstart.txt
<f..T...... runs/2013/7/475/sweep_475-50563.d/tic_front.csv
"""
changes = MSDSImpl.parse_rsync_changes(data)
self.assertEqual(changes["runs/2013/7/475/solvent_475-50479.d"],
(True, True))
self.assertEqual(changes["runs/2013/7/475/sweep_475-50563.d"],
(True, False))
self.assertEqual(changes["runs/2013/7/475"],
(True, True))
self.assertEqual(changes["runs"],
(True, True))
def setUp(self):
self.config = MSDSConfig(localdir=tempfile.mkdtemp())
self.api = MSDataSyncAPI(self.config, msds_log)
self.impl = MSDSImpl(msds_log, self.api)
# method stub
self.api.post_sync_step = dingus.Dingus()
def remove_localdir():
os.rmdir(self.config["localdir"])
self.addCleanup(remove_localdir)
self.rsyncconfig = self.RemoteSyncParamsStub({
"filename1": (False, False), # this file didn't change
"filename2": (False, False), # this file didn't change
"filename3": (False, True), # this file changed
"asdf": (False, True), # this file changed
})
self.filename_id_map = {
"filename1": (1, 10),
"filename2": (2, 20),
"filename3": (3, 30),
"filename4": (4, 40),
}
def test_parse_rsync_changes_cull(self):
"""
Check culling of empty directories from file_changes map.
"""
changes = {
'.': (True, True),
'runs': (True, True),
'runs/2013': (True, True),
'runs/2013/7': (True, True),
'runs/2013/7/475': (True, True),
'runs/2013/7/475/solvent_475-50479.d': (True, True),
'runs/2013/7/475/sweep_475-50563.d': (True, True),
'runs/2013/7/475/sweep_475-50563.d/DATA.MS': (False, False),
'runs/2013/7/475/sweep_475-50563.d/GC.ini': (False, False),
'runs/2013/7/475/sweep_475-50563.d/PRE_POST.INI': (False, False),
'runs/2013/7/475/sweep_475-50563.d/acqmeth.txt': (False, True),
'runs/2013/7/475/sweep_475-50563.d/cnorm.ini': (False, False),
'runs/2013/7/475/sweep_475-50563.d/runstart.txt': (False, False),
'runs/2013/7/475/sweep_475-50563.d/tic_front.csv': (False, False)
}
culled = MSDSImpl.cull_empty_dirs(changes)
culled_files = [f for f, c in culled]
self.assertTrue("runs/2013" in culled_files)
self.assertFalse("runs/2013/7/475/solvent_475-50479.d" in culled_files)
self.assertTrue("runs/2013/7/475/sweep_475-50563.d" in culled_files)
self.assertTrue(
"runs/2013/7/475/sweep_475-50563.d/DATA.MS" in culled_files)
self.assertTrue(
"runs/2013/7/475/sweep_475-50563.d/acqmeth.txt" in culled_files)
def test_parse_rsync_changes_propagate(self):
"""
Check propagation of file changes to parent directories.
"""
data = """
.d ./
.d runs/
.d runs/2013/
.d runs/2013/7/
.d runs/2013/7/475/
cd+++++++++ runs/2013/7/475/solvent_475-50479.d/
.d runs/2013/7/475/sweep_475-50563.d/
<f..T...... runs/2013/7/475/sweep_475-50563.d/DATA.MS
<f..T...... runs/2013/7/475/sweep_475-50563.d/GC.ini
<f..T...... runs/2013/7/475/sweep_475-50563.d/PRE_POST.INI
<f+.T...... runs/2013/7/475/sweep_475-50563.d/acqmeth.txt
<f..T...... runs/2013/7/475/sweep_475-50563.d/cnorm.ini
<f..T...... runs/2013/7/475/sweep_475-50563.d/runstart.txt
<f..T...... runs/2013/7/475/sweep_475-50563.d/tic_front.csv
"""
changes = MSDSImpl.parse_rsync_changes(data)
self.assertEqual(changes["runs/2013/7/475/solvent_475-50479.d"],
(True, True), "runs/2013/7/475/solvent_475-50479.d")
self.assertEqual(changes["runs/2013/7/475/sweep_475-50563.d"],
(True, True), "runs/2013/7/475/sweep_475-50563.d")
self.assertEqual(changes["runs/2013/7/475/sweep_475-50563.d/DATA.MS"],
(False, False),
"runs/2013/7/475/sweep_475-50563.d/DATA.MS")
self.assertEqual(
changes["runs/2013/7/475/sweep_475-50563.d/acqmeth.txt"],
(False, True), "runs/2013/7/475/solvent_475-50479.d/acqmeth.txt")
def test_parse_rsync_changes_empty_dir(self):
"""
Check parsing of rsync output -- changed and unchanged files
and directories.
"""
data = """
.d ./
.d runs/
.d runs/2013/
.d runs/2013/7/
.d runs/2013/7/475/
cd+++++++++ runs/2013/7/475/solvent_475-50479.d/
.d runs/2013/7/475/sweep_475-50563.d/
<f..T...... runs/2013/7/475/sweep_475-50563.d/DATA.MS
<f..T...... runs/2013/7/475/sweep_475-50563.d/GC.ini
<f..T...... runs/2013/7/475/sweep_475-50563.d/PRE_POST.INI
<f..T...... runs/2013/7/475/sweep_475-50563.d/acqmeth.txt
<f..T...... runs/2013/7/475/sweep_475-50563.d/cnorm.ini
<f..T...... runs/2013/7/475/sweep_475-50563.d/runstart.txt
<f..T...... runs/2013/7/475/sweep_475-50563.d/tic_front.csv
"""
changes = MSDSImpl.parse_rsync_changes(data)
self.assertEqual(changes["runs/2013/7/475/solvent_475-50479.d"],
(True, True))
self.assertEqual(changes["runs/2013/7/475/sweep_475-50563.d"],
(True, False))
self.assertEqual(changes["runs/2013/7/475"], (True, True))
self.assertEqual(changes["runs"], (True, True))
class MSDSImplTests(unittest.TestCase):
"""
These are unit tests for the `MSDSImpl` class.
"""
def setUp(self):
self.config = MSDSConfig(localdir=tempfile.mkdtemp())
self.api = MSDataSyncAPI(self.config, msds_log)
self.impl = MSDSImpl(msds_log, self.api)
# method stub
self.api.post_sync_step = dingus.Dingus()
def remove_localdir():
os.rmdir(self.config["localdir"])
self.addCleanup(remove_localdir)
self.rsyncconfig = self.RemoteSyncParamsStub({
"filename1": (False, False), # this file didn't change
"filename2": (False, False), # this file didn't change
"filename3": (False, True), # this file changed
"asdf": (False, True), # this file changed
})
self.filename_id_map = {
"filename1": (1, 10),
"filename2": (2, 20),
"filename3": (3, 30),
"filename4": (4, 40),
}
# serverCheckRunSampleFiles method only uses the
# file_changes member of RemoteSyncParams, so stub it
class RemoteSyncParamsStub(object):
def __init__(self, file_changes):
self.file_changes = file_changes
def test1_check_run_sample_files(self):
"""
Check that `MSDSImpl.serverCheckRunSampleFiles()` results in
an API call marking complete the correct samples.
"""
Server = dingus.Dingus()
with dingus.patch("mdatasync_client.MSDataSyncAPI.DataSyncServer", Server):
self.impl.serverCheckRunSampleFiles(self.rsyncconfig,
self.filename_id_map)
self.assertEqual(len(Server.return_value.calls), 1,
"One DataSyncServer instance is created")
runsampledict, last_error = Server.return_value.calls[0][1]
self.assertEqual(len(runsampledict), 2,
"Two samples are marked complete")
self.assertEqual(runsampledict, { 1: [10], 2: [20] },
"The correct samples are marked complete")
def create_data_file(self, *path):
temp_name = os.path.join(self.config["localdir"], *path)
os.makedirs(os.path.dirname(temp_name))
open(temp_name, "w").close()
def cleanup(temp_name, nparents):
logger.debug("removing %s" % temp_name)
os.remove(temp_name)
for p in range(nparents):
temp_name = os.path.dirname(temp_name)
logger.debug("rmdir %s" % temp_name)
os.rmdir(temp_name)
self.addCleanup(cleanup, temp_name, len(path) - 1)
def test2_check_run_sample_files_temp_files(self):
"""
Sample is not marked incomplete if there is a TEMP file in its
directory.
"""
# create a file called TEMP within a directory called
# filename2 somewhere within the data dir
self.create_data_file("test", "dir", "filename2", "TEMP")
Server = dingus.Dingus()
with dingus.patch("mdatasync_client.MSDataSyncAPI.DataSyncServer", Server):
self.impl.serverCheckRunSampleFiles(self.rsyncconfig,
self.filename_id_map)
self.assertEqual(len(Server.return_value.calls), 1,
"One DataSyncServer instance is created")
runsampledict, last_error = Server.return_value.calls[0][1]
self.assertEqual(len(runsampledict), 1,
"One sample is marked complete")
self.assertEqual(runsampledict, { 1: [10] },
"The correct sample is marked complete")
def test_parse_rsync_changes_empty_dir(self):
"""
Check parsing of rsync output -- changed and unchanged files
and directories.
"""
data = """
.d ./
.d runs/
.d runs/2013/
.d runs/2013/7/
.d runs/2013/7/475/
cd+++++++++ runs/2013/7/475/solvent_475-50479.d/
.d runs/2013/7/475/sweep_475-50563.d/
<f..T...... runs/2013/7/475/sweep_475-50563.d/DATA.MS
<f..T...... runs/2013/7/475/sweep_475-50563.d/GC.ini
<f..T...... runs/2013/7/475/sweep_475-50563.d/PRE_POST.INI
<f..T...... runs/2013/7/475/sweep_475-50563.d/acqmeth.txt
<f..T...... runs/2013/7/475/sweep_475-50563.d/cnorm.ini
<f..T...... runs/2013/7/475/sweep_475-50563.d/runstart.txt
<f..T...... runs/2013/7/475/sweep_475-50563.d/tic_front.csv
"""
changes = MSDSImpl.parse_rsync_changes(data)
self.assertEqual(changes["runs/2013/7/475/solvent_475-50479.d"],
(True, True))
self.assertEqual(changes["runs/2013/7/475/sweep_475-50563.d"],
(True, False))
self.assertEqual(changes["runs/2013/7/475"],
(True, True))
self.assertEqual(changes["runs"],
(True, True))
# self.assertEqual(changes["."],
# (True, True))
def test_parse_rsync_changes_propagate(self):
"""
Check propagation of file changes to parent directories.
"""
data = """
.d ./
.d runs/
.d runs/2013/
.d runs/2013/7/
.d runs/2013/7/475/
cd+++++++++ runs/2013/7/475/solvent_475-50479.d/
.d runs/2013/7/475/sweep_475-50563.d/
<f..T...... runs/2013/7/475/sweep_475-50563.d/DATA.MS
<f..T...... runs/2013/7/475/sweep_475-50563.d/GC.ini
<f..T...... runs/2013/7/475/sweep_475-50563.d/PRE_POST.INI
<f+.T...... runs/2013/7/475/sweep_475-50563.d/acqmeth.txt
<f..T...... runs/2013/7/475/sweep_475-50563.d/cnorm.ini
<f..T...... runs/2013/7/475/sweep_475-50563.d/runstart.txt
<f..T...... runs/2013/7/475/sweep_475-50563.d/tic_front.csv
"""
changes = MSDSImpl.parse_rsync_changes(data)
self.assertEqual(changes["runs/2013/7/475/solvent_475-50479.d"],
(True, True),
"runs/2013/7/475/solvent_475-50479.d")
self.assertEqual(changes["runs/2013/7/475/sweep_475-50563.d"],
(True, True),
"runs/2013/7/475/sweep_475-50563.d")
self.assertEqual(changes["runs/2013/7/475/sweep_475-50563.d/DATA.MS"],
(False, False),
"runs/2013/7/475/sweep_475-50563.d/DATA.MS")
self.assertEqual(changes["runs/2013/7/475/sweep_475-50563.d/acqmeth.txt"],
(False, True),
"runs/2013/7/475/solvent_475-50479.d/acqmeth.txt")
def test_parse_rsync_changes_cull(self):
"""
Check culling of empty directories from file_changes map.
"""
changes = {
'.': (True, True),
'runs': (True, True),
'runs/2013': (True, True),
'runs/2013/7': (True, True),
'runs/2013/7/475': (True, True),
'runs/2013/7/475/solvent_475-50479.d': (True, True),
'runs/2013/7/475/sweep_475-50563.d': (True, True),
'runs/2013/7/475/sweep_475-50563.d/DATA.MS': (False, False),
'runs/2013/7/475/sweep_475-50563.d/GC.ini': (False, False),
'runs/2013/7/475/sweep_475-50563.d/PRE_POST.INI': (False, False),
'runs/2013/7/475/sweep_475-50563.d/acqmeth.txt': (False, True),
'runs/2013/7/475/sweep_475-50563.d/cnorm.ini': (False, False),
'runs/2013/7/475/sweep_475-50563.d/runstart.txt': (False, False),
'runs/2013/7/475/sweep_475-50563.d/tic_front.csv': (False, False)
}
culled = MSDSImpl.cull_empty_dirs(changes)
culled_files = [f for f, c in culled]
self.assertTrue("runs/2013" in culled_files)
self.assertFalse("runs/2013/7/475/solvent_475-50479.d" in culled_files)
self.assertTrue("runs/2013/7/475/sweep_475-50563.d" in culled_files)
self.assertTrue("runs/2013/7/475/sweep_475-50563.d/DATA.MS" in culled_files)
self.assertTrue("runs/2013/7/475/sweep_475-50563.d/acqmeth.txt" in culled_files)
class MSDSImplTests(unittest.TestCase):
"""
These are unit tests for the `MSDSImpl` class.
"""
def setUp(self):
self.config = MSDSConfig(localdir=tempfile.mkdtemp())
self.api = MSDataSyncAPI(self.config, msds_log)
self.impl = MSDSImpl(msds_log, self.api)
# method stub
self.api.post_sync_step = dingus.Dingus()
def remove_localdir():
os.rmdir(self.config["localdir"])
self.addCleanup(remove_localdir)
self.rsyncconfig = self.RemoteSyncParamsStub({
"filename1": (False, False), # this file didn't change
"filename2": (False, False), # this file didn't change
"filename3": (False, True), # this file changed
"asdf": (False, True), # this file changed
})
self.filename_id_map = {
"filename1": (1, 10),
"filename2": (2, 20),
"filename3": (3, 30),
"filename4": (4, 40),
}
# serverCheckRunSampleFiles method only uses the
# file_changes member of RemoteSyncParams, so stub it
class RemoteSyncParamsStub(object):
def __init__(self, file_changes):
self.file_changes = file_changes
def test1_check_run_sample_files(self):
"""
Check that `MSDSImpl.serverCheckRunSampleFiles()` results in
an API call marking complete the correct samples.
"""
Server = dingus.Dingus()
with dingus.patch("mdatasync_client.MSDataSyncAPI.DataSyncServer",
Server):
self.impl.serverCheckRunSampleFiles(self.rsyncconfig,
self.filename_id_map)
self.assertEqual(len(Server.return_value.calls), 1,
"One DataSyncServer instance is created")
runsampledict, last_error = Server.return_value.calls[0][1]
self.assertEqual(len(runsampledict), 2,
"Two samples are marked complete")
self.assertEqual(runsampledict, {
1: [10],
2: [20]
}, "The correct samples are marked complete")
def create_data_file(self, *path):
temp_name = os.path.join(self.config["localdir"], *path)
os.makedirs(os.path.dirname(temp_name))
open(temp_name, "w").close()
def cleanup(temp_name, nparents):
logger.debug("removing %s" % temp_name)
os.remove(temp_name)
for p in range(nparents):
temp_name = os.path.dirname(temp_name)
logger.debug("rmdir %s" % temp_name)
os.rmdir(temp_name)
self.addCleanup(cleanup, temp_name, len(path) - 1)
def test2_check_run_sample_files_temp_files(self):
"""
Sample is not marked incomplete if there is a TEMP file in its
directory.
"""
# create a file called TEMP within a directory called
# filename2 somewhere within the data dir
self.create_data_file("test", "dir", "filename2", "TEMP")
Server = dingus.Dingus()
with dingus.patch("mdatasync_client.MSDataSyncAPI.DataSyncServer",
Server):
self.impl.serverCheckRunSampleFiles(self.rsyncconfig,
self.filename_id_map)
self.assertEqual(len(Server.return_value.calls), 1,
"One DataSyncServer instance is created")
runsampledict, last_error = Server.return_value.calls[0][1]
self.assertEqual(len(runsampledict), 1,
"One sample is marked complete")
self.assertEqual(runsampledict, {1: [10]},
"The correct sample is marked complete")
def test_parse_rsync_changes_empty_dir(self):
"""
Check parsing of rsync output -- changed and unchanged files
and directories.
"""
data = """
.d ./
.d runs/
.d runs/2013/
.d runs/2013/7/
.d runs/2013/7/475/
cd+++++++++ runs/2013/7/475/solvent_475-50479.d/
.d runs/2013/7/475/sweep_475-50563.d/
<f..T...... runs/2013/7/475/sweep_475-50563.d/DATA.MS
<f..T...... runs/2013/7/475/sweep_475-50563.d/GC.ini
<f..T...... runs/2013/7/475/sweep_475-50563.d/PRE_POST.INI
<f..T...... runs/2013/7/475/sweep_475-50563.d/acqmeth.txt
<f..T...... runs/2013/7/475/sweep_475-50563.d/cnorm.ini
<f..T...... runs/2013/7/475/sweep_475-50563.d/runstart.txt
<f..T...... runs/2013/7/475/sweep_475-50563.d/tic_front.csv
"""
changes = MSDSImpl.parse_rsync_changes(data)
self.assertEqual(changes["runs/2013/7/475/solvent_475-50479.d"],
(True, True))
self.assertEqual(changes["runs/2013/7/475/sweep_475-50563.d"],
(True, False))
self.assertEqual(changes["runs/2013/7/475"], (True, True))
self.assertEqual(changes["runs"], (True, True))
# self.assertEqual(changes["."],
# (True, True))
def test_parse_rsync_changes_propagate(self):
"""
Check propagation of file changes to parent directories.
"""
data = """
.d ./
.d runs/
.d runs/2013/
.d runs/2013/7/
.d runs/2013/7/475/
cd+++++++++ runs/2013/7/475/solvent_475-50479.d/
.d runs/2013/7/475/sweep_475-50563.d/
<f..T...... runs/2013/7/475/sweep_475-50563.d/DATA.MS
<f..T...... runs/2013/7/475/sweep_475-50563.d/GC.ini
<f..T...... runs/2013/7/475/sweep_475-50563.d/PRE_POST.INI
<f+.T...... runs/2013/7/475/sweep_475-50563.d/acqmeth.txt
<f..T...... runs/2013/7/475/sweep_475-50563.d/cnorm.ini
<f..T...... runs/2013/7/475/sweep_475-50563.d/runstart.txt
<f..T...... runs/2013/7/475/sweep_475-50563.d/tic_front.csv
"""
changes = MSDSImpl.parse_rsync_changes(data)
self.assertEqual(changes["runs/2013/7/475/solvent_475-50479.d"],
(True, True), "runs/2013/7/475/solvent_475-50479.d")
self.assertEqual(changes["runs/2013/7/475/sweep_475-50563.d"],
(True, True), "runs/2013/7/475/sweep_475-50563.d")
self.assertEqual(changes["runs/2013/7/475/sweep_475-50563.d/DATA.MS"],
(False, False),
"runs/2013/7/475/sweep_475-50563.d/DATA.MS")
self.assertEqual(
changes["runs/2013/7/475/sweep_475-50563.d/acqmeth.txt"],
(False, True), "runs/2013/7/475/solvent_475-50479.d/acqmeth.txt")
def test_parse_rsync_changes_cull(self):
"""
Check culling of empty directories from file_changes map.
"""
changes = {
'.': (True, True),
'runs': (True, True),
'runs/2013': (True, True),
'runs/2013/7': (True, True),
'runs/2013/7/475': (True, True),
'runs/2013/7/475/solvent_475-50479.d': (True, True),
'runs/2013/7/475/sweep_475-50563.d': (True, True),
'runs/2013/7/475/sweep_475-50563.d/DATA.MS': (False, False),
'runs/2013/7/475/sweep_475-50563.d/GC.ini': (False, False),
'runs/2013/7/475/sweep_475-50563.d/PRE_POST.INI': (False, False),
'runs/2013/7/475/sweep_475-50563.d/acqmeth.txt': (False, True),
'runs/2013/7/475/sweep_475-50563.d/cnorm.ini': (False, False),
'runs/2013/7/475/sweep_475-50563.d/runstart.txt': (False, False),
'runs/2013/7/475/sweep_475-50563.d/tic_front.csv': (False, False)
}
culled = MSDSImpl.cull_empty_dirs(changes)
culled_files = [f for f, c in culled]
self.assertTrue("runs/2013" in culled_files)
self.assertFalse("runs/2013/7/475/solvent_475-50479.d" in culled_files)
self.assertTrue("runs/2013/7/475/sweep_475-50563.d" in culled_files)
self.assertTrue(
"runs/2013/7/475/sweep_475-50563.d/DATA.MS" in culled_files)
self.assertTrue(
"runs/2013/7/475/sweep_475-50563.d/acqmeth.txt" in culled_files)