def analyse_files(filepaths='all'):
"""Analyses all given files in list. This function can be used by the command [a].
:param filepaths: list of files to analyse with
their relative dir path added
.. todo:: Change to no override mode. measurement.Measurement.plot(override=False)
.. todo:: a + today => only analyse files for today
.. todo:: a + override => override=True
"""
# get the theme from config
theme = configuration['EXPORT_THEME']
if filepaths == 'all':
filepaths = find_all_files()
elif filepaths == 'today':
pass # TODO: only analyse the files of today
# analyse all files
for f in filepaths:
try:
m = measurement.Measurement(f)
export_fit = 'Mathematica' if configuration['EXPORT_FIT_FUNCTIONS'] == True else False
m.fit(fit_function_export=export_fit)
m.plot(file_extention=configuration['IMAGE_FORMAT'])
m.export_meta(make_html=True, theme=theme)
except Exception as e:
print(f'The following exception occured during runtime:\n\n{e}\n\nContinuing operation.')
def test_false_url(self):
url = 'asdfasdfff'
meas = measurement.Measurement(0, 0, 0, 0, 0, 0)
com = Communication(url)
with self.assertRaises(Exception):
com.post_measurement(meas)
def test_wrong_url(self):
url = 'https://optiair.azurewebsites.net/api/asdf'
meas = measurement.Measurement(0, 0, 0, 0, 0, 0)
com = Communication(url)
with self.assertRaises(requests.HTTPError):
com.post_measurement(meas)
def startStream(self):
self.running = True
ser = serial.Serial(self.serial_port, timeout=1.0)
while (self.running):
line = ser.readline().decode("utf-8")
measure = measurement.Measurement(line)
self.measurementCallback(measure)
def add_measurement_points(self,
measurement_points,
measurement_titles=[]):
# Make a list of empty titles if no titles were given
if len(measurement_titles) == 0:
measurement_titles = [""] * len(measurement_points)
# list of tuples
self.measurement_points = np.empty(len(measurement_points),
dtype=measurement.Measurement)
self.interference_times = np.empty(len(measurement_points))
for i, meas in enumerate(measurement_points):
# reflecting on the PEC walls
# dist : the 4 reflection points of measurement in the PEC
dist = np.empty((4, 2))
dist[0, :] = -meas[0], meas[1]
dist[1, :] = meas[0], -meas[1]
dist[2, :] = 2 * self.x_length - meas[0], meas[1]
dist[3, :] = meas[0], 2 * self.y_length - meas[1]
dist -= (self.source.pos_x, self.source.pos_y)
# euclidian distance
dist = np.linalg.norm(dist, axis=-1)
# the least distance between the source & the reflection point of
# the measurement will be approx the distance the wave has to
# travel
min_dist = np.min(dist)
# set interference
self.interference_times[i] = min_dist / c
self.measurement_points[i] = measurement.Measurement(
meas[0], meas[1], self.interference_times[i],
measurement_titles[i])
self.measurement_points[i].wave_time = (np.linalg.norm(
(meas[0] - self.source.pos_x, meas[1] - self.source.pos_y)) /
c)
# return an estimate maximum of time before inteference occurs (foreach meas_point)
self.meas_pos_x = (
np.asarray([meas.pos_x
for meas in self.measurement_points]) // self.Delta_x)
self.meas_pos_y = (
np.asarray([meas.pos_y
for meas in self.measurement_points]) // self.Delta_y)
return self.interference_times
def exampleMeasurements(application):
time.sleep(1.0)
ex1 = measurement.Measurement("")
ex1.sensor_name = "CO2"
ex1.value = "2000"
ex1.unit = "ppm"
application.addMeasurement(ex1)
time.sleep(1.0)
ex2 = measurement.Measurement("")
ex2.sensor_name = "CO2"
ex2.value = "2200"
ex2.unit = "ppm"
application.addMeasurement(ex2)
time.sleep(1.0)
ex3 = measurement.Measurement("")
ex3.sensor_name = "Temperature"
ex3.value = "22.2"
ex3.unit = "C"
application.addMeasurement(ex3)
ex4 = measurement.Measurement("")
ex4.sensor_name = "Humidity"
ex4.value = "30"
ex4.unit = "%"
application.addMeasurement(ex4)
time.sleep(1.0)
application.removeMeasurement(ex1)
time.sleep(1.0)
application.removeMeasurement("Temperature")
time.sleep(1.0)
ex5 = measurement.Measurement("")
ex5.sensor_name = "Humidity"
ex5.value = "34"
ex5.unit = "%"
application.addMeasurement(ex5)
time.sleep(1.0)
ex6 = measurement.Measurement("")
ex6.sensor_name = "CO2"
ex6.value = "2300"
ex6.unit = "ppm"
application.addMeasurement(ex6)
sys.exit('Error: %s is not recognized as a valid directory' % path)
if not path[-1] == '/':
path = path + '/'
print 'Photoacoustic Data Analysis Software'
print 'Author: Mitchell Duffy'
print 'License: MIT License'
print ''
print 'Building Database...'
print 'For large directories this may take a few minutes.'
print ''
ml = measure_list.MeasureList()
for i in os.listdir(path):
if not i.endswith('.txt'):
continue
else:
m = measurement.Measurement(path + i)
m.process()
ml.organize(m)
# This fuction is used to check the max/min of each graph in a series
#graphll.graphme(ml)
menu = graphmenu.GraphMenu(ml)
