def testEquals(self):
self.assertSame()
self.assertDifference(cnt=2)
self.assertDifference(owner='NLM')
self.assertDifference(name='other')
self.assertNotEqual(Keyword(1, 'NASA', 1, 'name', True),
Keyword(1, 'NASA', 1, 'name', False))
def KeywordList(self, element):
owner = element.get('Owner', 'NLM').strip().upper()
logger.debug('KeywordList Owner="%s"', owner)
for cnt, keyword in enumerate(element.getchildren()):
if keyword.text is not None:
yield Keyword(
self.pmid, owner, cnt + 1, keyword.text.strip(),
keyword.get('MajorTopicYN', 'N') == 'Y',
)
from medic.crud import _dump
DATA = [
Section(1, 1, 'Title', 'The Title'),
Section(1, 2, 'Abstract', 'The Abstract'),
Descriptor(1, 1, 'd_name', True),
Descriptor(1, 2, 'd_name'),
Qualifier(1, 1, 1, 'q_name', True),
Author(1, 1, 'first'),
Author(1, 2, 'last'),
Identifier(1, 'ns', 'id'),
Database(1, 'name', 'accession'),
PublicationType(1, 'some'),
PublicationType(1, 'another'),
Chemical(1, 1, 'name', 'uid'),
Keyword(1, 'NOTNLM', 1, 'name', True),
Medline(1, 'MEDLINE', 'journal', 'pub_date', date.today()),
]
class ParserMock:
def __init__(self, instances):
self.instances = instances
def parse(self, _):
for i in self.instances:
yield i
class TestDump(unittest.TestCase):
def setUp(self):
def testRelations(self):
i = Keyword(1, 'NASA', 1, 'name')
self.sess.add(i)
self.sess.commit()
self.assertEqual([i], self.M.keywords)
self.assertEqual(self.M, i.citation)
def testToRepr(self):
self.assertEqual('Keyword<1:NASA:1>',
repr(Keyword(1, 'NASA', 1, 'name')))
def testToString(self):
self.assertEqual('1\tNASA\t1\tF\tname\n',
str(Keyword(1, 'NASA', 1, 'name')))
self.assertEqual('1\tNASA\t1\tT\tname\n',
str(Keyword(1, 'NASA', 1, 'name', True)))
def testMajorIsBool(self):
self.sess.add(Keyword(1, 'NLM', 1, 'name', None))
self.assertRaises(IntegrityError, self.sess.commit)