from micron.prepare_grid import prepare_grid
grid_solve_parameters = {
"evidence_factor": [120, 160, 200],
"comb_angle_factor": [14, 16, 22, 28],
"start_edge_prior": [200],
"selection_cost": [-160, -180, -200, -220, -240]
}
prepare_grid(
base_dir="/nrs/funke/ecksteinn/micron_experiments",
experiment="cosem_hela_2_block_3",
train_number=0,
predict_number=10,
graph_number=0,
grid_solve_parameters=grid_solve_parameters,
mount_dirs="/nrs, /scratch, /groups, /misc",
singularity=
"/groups/funke/home/ecksteinn/Projects/microtubules/micron/singularity/micron114.img",
num_cpus=10,
num_block_workers=10,
queue="normal",
num_cache_workers=10,
min_solve_number=0,
time_limit=120,
context=400)
from micron.prepare_grid import prepare_grid
grid_solve_parameters = {
"evidence_factor": [12, 14, 16],
"comb_angle_factor": [12, 14, 16],
"start_edge_prior": [180, 200, 220],
"selection_cost": [-70, -80, -90]
}
prepare_grid(base_dir="",
experiment="",
train_number=0,
predict_number=0,
graph_number=0,
grid_solve_parameters=grid_solve_parameters,
mount_dirs="",
singularity="",
num_cpus=5,
num_block_workers=5,
queue="normal",
num_cache_workers=5,
min_solve_number=0)