def test_migrate_sample(self):
samp1 = 'd8592c74-85f0-2135-e040-8a80115d6401' # 000001766
samp2 = 'ceaa6fd6-0861-4335-aa35-da1857bd5294' # 000067789
with Transaction() as t:
acct1, src1 = self._get_source_from_sample(t, samp1)
acct2, src2 = self._get_source_from_sample(t, samp2)
sr = SampleRepo(t)
sr.migrate_sample(samp1, src1, src2, True)
# get new samples by source
src1_samples = sr.get_samples_by_source(acct1, src1)
src2_samples = sr.get_samples_by_source(acct2, src2)
# verify samples are part of the new source
self.assertFalse(self._sample_in_source(src1_samples, samp1))
self.assertTrue(self._sample_in_source(src2_samples, samp1))
def test_migrate_sample_exceptions(self):
samp1 = 'd8592c74-85f0-2135-e040-8a80115d6401' # 000001766
samp2 = 'ceaa6fd6-0861-4335-aa35-da1857bd5294' # 000067789
bad = 'ffffffff-ffff-ffff-aaaa-aaaaaaaaaaaa'
with Transaction() as t:
_, src1 = self._get_source_from_sample(t, samp1)
_, src2 = self._get_source_from_sample(t, samp2)
sr = SampleRepo(t)
with self.assertRaises(RepoException):
# verify we dont do something unless we are intentional
sr.migrate_sample(samp1, src1, src2, False)
with self.assertRaises(RepoException):
# the sample must be associated witht the source (src)
# to move
sr.migrate_sample(samp2, src1, src2, True)
with self.assertRaises(RepoException):
# the destination must exist
sr.migrate_sample(samp1, src1, bad, True)