def get_view_cmd(iargs):
"""Assemble view.py command line from input arguments"""
# define ALL parsing options from create_parser() that are common to view.py
parser = argparse.ArgumentParser(description='view.py parser')
parser.add_argument('-v',
'--vlim',
dest='vlim',
nargs=2,
metavar=('VMIN', 'VMAX'),
type=float,
help='Display limits for matrix plotting.')
parser.add_argument('--noverbose',
dest='print_msg',
action='store_false',
help='Disable the verbose message printing.')
parser = arg_group.add_figure_argument(parser)
parser = arg_group.add_save_argument(parser)
# get args that are applicable to view.py
unique_args = parser.parse_known_args(iargs)[1]
view_args = [i for i in iargs if i not in unique_args]
# assemble view.py command line
inps = cmd_line_parse(iargs)
view_cmd = 'view.py {} '.format(inps.file[0])
if inps.dset:
view_cmd += ' {} '.format(inps.dset)
view_cmd += ' '.join(view_args)
return view_cmd
def create_parser():
parser = argparse.ArgumentParser(description='Interactive time-series viewer',
formatter_class=argparse.RawTextHelpFormatter,
epilog=EXAMPLE)
parser.add_argument('file', nargs='+',
help='time-series file to display\n'
'i.e.: timeseries_ERA5_ramp_demErr.h5 (MintPy)\n'
' LS-PARAMS.h5 (GIAnT)\n'
' S1_IW12_128_0593_0597_20141213_20180619.he5 (HDF-EOS5)')
parser.add_argument('--label', dest='file_label', nargs='*', help='labels to display for multiple input files')
parser.add_argument('--ylim', dest='ylim', nargs=2, metavar=('YMIN', 'YMAX'), type=float, help='Y limits for point plotting.')
parser.add_argument('--tick-right', dest='tick_right', action='store_true', help='set tick and tick label to the right')
parser.add_argument('-l','--lookup', dest='lookup_file', type=str, help='lookup table file')
parser.add_argument('-n', dest='idx', metavar='NUM', type=int, help='Epoch/slice number for initial display.')
parser.add_argument('--error', dest='error_file', help='txt file with error for each date.')
# time info
parser.add_argument('--start-date', dest='start_date', type=str, help='start date of displacement to display')
parser.add_argument('--end-date', dest='end_date', type=str, help='end date of displacement to display')
parser.add_argument('--exclude', '--ex', dest='ex_date_list', nargs='*', default=['exclude_date.txt'], help='Exclude date shown as gray.')
parser.add_argument('--zf', '--zero-first', dest='zero_first', action='store_true', help='Set displacement at first acquisition to zero.')
parser.add_argument('--off','--offset', dest='offset', type=float, help='Offset for each timeseries file.')
parser.add_argument('--noverbose', dest='print_msg', action='store_false', help='Disable the verbose message printing.')
# temporal model fitting
parser.add_argument('--nomodel', '--nofit', dest='plot_model', action='store_false',
help='Do not plot the prediction of the time function (deformation model) fitting.')
parser.add_argument('--plot-model-conf-int', '--plot-fit-conf-int', dest='plot_model_conf_int', action='store_true',
help='Plot the time function prediction confidence intervals.\n'
'[!-- Preliminary feature alert! --!]\n'
'[!-- This feature is NOT throughly checked. Read the code before use. Interpret at your own risk! --!]')
parser = arg_group.add_timefunc_argument(parser)
# pixel of interest
pixel = parser.add_argument_group('Pixel Input')
pixel.add_argument('--yx', type=int, metavar=('Y', 'X'), nargs=2, help='initial pixel to plot in Y/X coord')
pixel.add_argument('--lalo', type=float, metavar=('LAT', 'LON'), nargs=2, help='initial pixel to plot in lat/lon coord')
pixel.add_argument('--marker', type=str, default='o', help='marker style (default: %(default)s).')
pixel.add_argument('--ms', '--markersize', dest='marker_size', type=float, default=6.0, help='marker size (default: %(default)s).')
pixel.add_argument('--lw', '--linewidth', dest='linewidth', type=float, default=0, help='line width (default: %(default)s).')
pixel.add_argument('--ew', '--edgewidth', dest='edge_width', type=float, default=1.0, help='Edge width for the error bar (default: %(default)s)')
# other groups
parser = arg_group.add_data_disp_argument(parser)
parser = arg_group.add_dem_argument(parser)
parser = arg_group.add_figure_argument(parser)
parser = arg_group.add_gps_argument(parser)
parser = arg_group.add_mask_argument(parser)
parser = arg_group.add_map_argument(parser)
parser = arg_group.add_memory_argument(parser)
parser = arg_group.add_reference_argument(parser)
parser = arg_group.add_save_argument(parser)
parser = arg_group.add_subset_argument(parser)
return parser
def create_parser():
parser = argparse.ArgumentParser(
description='Generate transect/profile along a line',
formatter_class=argparse.RawTextHelpFormatter,
epilog=EXAMPLE)
parser.add_argument('file',
nargs='+',
help='input file to show transection')
parser.add_argument('--dset', dest='dset', help='Dataset name to read')
parser.add_argument('-v',
'--vlim',
dest='vlim',
nargs=2,
metavar=('VMIN', 'VMAX'),
type=float,
help='Display limits for matrix plotting.')
parser.add_argument(
'--offset',
'--off',
dest='offset',
type=float,
nargs='+',
default=[0.05],
help=
'offset between transects [for multiple files only; default: %(default)s m].\n'
'number of input offsets should be:\n'
' 1 - same (sequential) offset between adjacent transects OR\n'
' num_file - different (cumulative) offset for each file, starting from 0.'
)
parser.add_argument('--noverbose',
dest='print_msg',
action='store_false',
help='Disable the verbose message printing.')
lines = parser.add_argument_group('Profile location',
'Start/end points of profile')
lines.add_argument(
'--start-yx',
'--yx0',
dest='start_yx',
metavar=('Y0', 'X0'),
type=int,
nargs=2,
help='start point of the profile in pixel number [y, x]')
lines.add_argument(
'--end-yx',
'--yx1',
dest='end_yx',
metavar=('Y1', 'X1'),
type=int,
nargs=2,
help='end point of the profile in pixel number [y, x]')
lines.add_argument('--start-lalo',
'--lalo0',
dest='start_lalo',
metavar=('LAT0', 'LON0'),
type=float,
nargs=2,
help='start point of the profile in [lat, lon]')
lines.add_argument('--end-lalo',
'--lalo1',
dest='end_lalo',
metavar=('LAT1', 'LON1'),
type=float,
nargs=2,
help='end point of the profile in [lat, lon]')
lines.add_argument(
'--line-file',
dest='lola_file',
help=
'file with start and end point info in lon lat, same as GMT format.\n'
+ GMT_FILE)
lines.add_argument(
'--interpolation',
default='nearest',
choices=['nearest', 'bilinear', 'cubic'],
help=
'interpolation method while extacting profile along the line. Default: nearest.'
)
lines.add_argument('--ms',
'--markersize',
dest='marker_size',
type=float,
default=2.0,
help='Point marker size. Default: 2.0')
parser = arg_group.add_figure_argument(parser)
parser = arg_group.add_save_argument(parser)
return parser
def create_parser():
parser = argparse.ArgumentParser(
description='Interactive time-series viewer',
formatter_class=argparse.RawTextHelpFormatter,
epilog=EXAMPLE)
parser.add_argument(
'file',
nargs='+',
help='time-series file to display\n'
'i.e.: timeseries_ERA5_ramp_demErr.h5 (MintPy)\n'
' LS-PARAMS.h5 (GIAnT)\n'
' S1_IW12_128_0593_0597_20141213_20180619.he5 (HDF-EOS5)')
parser.add_argument('--label',
dest='file_label',
nargs='*',
help='labels to display for multiple input files')
parser.add_argument('--ylim',
dest='ylim',
nargs=2,
metavar=('YMIN', 'YMAX'),
type=float,
help='Y limits for point plotting.')
parser.add_argument('--tick-right',
dest='tick_right',
action='store_true',
help='set tick and tick label to the right')
parser.add_argument('-l',
'--lookup',
dest='lookup_file',
type=str,
help='lookup table file')
pixel = parser.add_argument_group('Pixel Input')
pixel.add_argument('--yx',
type=int,
metavar=('Y', 'X'),
nargs=2,
help='initial pixel to plot in Y/X coord')
pixel.add_argument('--lalo',
type=float,
metavar=('LAT', 'LON'),
nargs=2,
help='initial pixel to plot in lat/lon coord')
pixel.add_argument('--ms',
'--markersize',
dest='marker_size',
type=float,
default=6.0,
help='Point marker size. Default: 6')
pixel.add_argument('--ew',
'--edgewidth',
dest='edge_width',
type=float,
default=1.0,
help='Edge width. Default: 1.0')
parser.add_argument('-n',
dest='idx',
metavar='NUM',
type=int,
help='Epoch/slice number to display.')
parser.add_argument('--error',
dest='error_file',
help='txt file with error for each date.')
parser.add_argument('--start-date',
dest='start_date',
type=str,
help='start date of displacement to display')
parser.add_argument('--end-date',
dest='end_date',
type=str,
help='end date of displacement to display')
parser.add_argument('--exclude',
'--ex',
dest='ex_date_list',
nargs='*',
default=['exclude_date.txt'],
help='Exclude date shown as gray.')
parser.add_argument('--zf',
'--zero-first',
dest='zero_first',
action='store_true',
help='Set displacement at first acquisition to zero.')
parser.add_argument('--off',
'--offset',
dest='offset',
type=float,
help='Offset for each timeseries file.')
parser.add_argument('--noverbose',
dest='print_msg',
action='store_false',
help='Disable the verbose message printing.')
parser = arg_group.add_data_disp_argument(parser)
parser = arg_group.add_dem_argument(parser)
parser = arg_group.add_figure_argument(parser)
parser = arg_group.add_gps_argument(parser)
parser = arg_group.add_mask_argument(parser)
parser = arg_group.add_map_argument(parser)
parser = arg_group.add_reference_argument(parser)
parser = arg_group.add_save_argument(parser)
parser = arg_group.add_subset_argument(parser)
return parser
