def test_io_mrk():
"""Test IO for mrk files"""
tempdir = _TempDir()
pts = read_mrk(mrk_fname)
# txt
path = os.path.join(tempdir, 'mrk.txt')
_write_dig_points(path, pts)
pts_2 = read_mrk(path)
assert_array_equal(pts, pts_2, "read/write mrk to text")
def test_io_mrk():
"""Test IO for mrk files"""
tempdir = _TempDir()
pts = read_mrk(mrk_fname)
# txt
path = os.path.join(tempdir, 'mrk.txt')
_write_dig_points(path, pts)
pts_2 = read_mrk(path)
assert_array_equal(pts, pts_2, "read/write mrk to text")
def test_io_dig_points():
"""Test Writing for dig files"""
tempdir = _TempDir()
points = _read_dig_points(hsp_fname)
dest = op.join(tempdir, 'test.txt')
assert_raises(ValueError, _write_dig_points, dest, points[:, :2])
_write_dig_points(dest, points)
points1 = _read_dig_points(dest)
err = "Dig points diverged after writing and reading."
assert_array_equal(points, points1, err)
points2 = np.array([[-106.93, 99.80], [99.80, 68.81]])
np.savetxt(dest, points2, delimiter='\t', newline='\n')
assert_raises(ValueError, _read_dig_points, dest)
def test_io_dig_points():
"""Test Writing for dig files"""
tempdir = _TempDir()
points = _read_dig_points(hsp_fname)
dest = op.join(tempdir, 'test.txt')
assert_raises(ValueError, _write_dig_points, dest, points[:, :2])
_write_dig_points(dest, points)
points1 = _read_dig_points(dest)
err = "Dig points diverged after writing and reading."
assert_array_equal(points, points1, err)
points2 = np.array([[-106.93, 99.80], [99.80, 68.81]])
np.savetxt(dest, points2, delimiter='\t', newline='\n')
assert_raises(ValueError, _read_dig_points, dest)
def test_io_mrk():
"""Test IO for mrk files."""
tempdir = _TempDir()
pts = read_mrk(mrk_fname)
# txt
path = os.path.join(tempdir, 'mrk.txt')
_write_dig_points(path, pts)
pts_2 = read_mrk(path)
assert_array_equal(pts, pts_2, "read/write mrk to text")
# pickle
fname = os.path.join(tempdir, 'mrk.pickled')
with open(fname, 'wb') as fid:
pickle.dump(dict(mrk=pts), fid)
pts_2 = read_mrk(fname)
assert_array_equal(pts_2, pts, "pickle mrk")
with open(fname, 'wb') as fid:
pickle.dump(dict(), fid)
pytest.raises(ValueError, read_mrk, fname)
# unsupported extension
pytest.raises(ValueError, read_mrk, "file.ext")
def test_io_mrk():
"""Test IO for mrk files."""
tempdir = _TempDir()
pts = read_mrk(mrk_fname)
# txt
path = os.path.join(tempdir, 'mrk.txt')
_write_dig_points(path, pts)
pts_2 = read_mrk(path)
assert_array_equal(pts, pts_2, "read/write mrk to text")
# pickle
fname = os.path.join(tempdir, 'mrk.pickled')
with open(fname, 'wb') as fid:
pickle.dump(dict(mrk=pts), fid)
pts_2 = read_mrk(fname)
assert_array_equal(pts_2, pts, "pickle mrk")
with open(fname, 'wb') as fid:
pickle.dump(dict(), fid)
pytest.raises(ValueError, read_mrk, fname)
# unsupported extension
pytest.raises(ValueError, read_mrk, "file.ext")
