def update(self):
self._view.clear()
left_mesh = self._viewport_model.observed_objects[
IntraAnalysisParameterNames.LEFT_WHITE_SURFACE]
right_mesh = self._viewport_model.observed_objects[
IntraAnalysisParameterNames.RIGHT_WHITE_SURFACE]
left_sulci = self._viewport_model.observed_objects[
IntraAnalysisParameterNames.LEFT_SULCI]
right_sulci = self._viewport_model.observed_objects[
IntraAnalysisParameterNames.RIGHT_SULCI]
left_labeled_sulci = self._viewport_model.observed_objects[
IntraAnalysisParameterNames.LEFT_LABELED_SULCI]
right_labeled_sulci = self._viewport_model.observed_objects[
IntraAnalysisParameterNames.RIGHT_LABELED_SULCI]
grey_color = [0.8, 0.8, 0.8, 1.]
if self.view_type() == ViewType.THREE_D and left_mesh is not None:
left_mesh.set_color(grey_color)
self._view.add_object(left_mesh)
if self.view_type() == ViewType.THREE_D and right_mesh is not None:
right_mesh.set_color(grey_color)
self._view.add_object(right_mesh)
if left_labeled_sulci is not None:
self._view.add_object(left_labeled_sulci)
elif left_sulci is not None:
self._view.add_object(left_sulci)
if right_labeled_sulci is not None:
self._view.add_object(right_labeled_sulci)
elif right_sulci is not None:
self._view.add_object(right_sulci)
if ((left_mesh is not None) or (right_mesh is not None) or
(left_sulci is not None) or (right_sulci is not None) or
(left_labeled_sulci is not None) or
(right_labeled_sulci is not None)) \
and self.view_type() != ViewType.THREE_D:
mri = self._viewport_model.observed_objects[
IntraAnalysisParameterNames.CORRECTED_MRI]
if mri is not None:
self._view.add_object(mri)
self._temp_object = []
gw_color = [1., 0.7, 0.7, 1.]
if self.view_type() != ViewType.THREE_D and left_mesh is not None:
print('add 2d mesh left')
left_fus = Object3D.from_fusion(
left_mesh, method='Fusion2DMeshMethod')
left_fus.set_color(gw_color)
print('left_fus:', left_fus)
self._temp_object = [left_fus]
self._view.add_object(left_fus)
if self.view_type() != ViewType.THREE_D and right_mesh is not None:
right_fus = Object3D.from_fusion(
right_mesh, method='Fusion2DMeshMethod')
right_fus.set_color(gw_color)
self._temp_object.append(right_fus)
self._view.add_object(right_fus)
def update(self):
self._view.clear()
left_mesh = self._viewport_model.observed_objects[
IntraAnalysisParameterNames.LEFT_GREY_SURFACE]
right_mesh = self._viewport_model.observed_objects[
IntraAnalysisParameterNames.RIGHT_GREY_SURFACE]
yellow_color = [0.9, 0.7, 0.0, 1]
gw_color = [1., 0.7, 0.7, 1.]
if left_mesh is not None or right_mesh is not None:
mri = self._viewport_model.observed_objects[
IntraAnalysisParameterNames.CORRECTED_MRI]
if mri is not None:
self._view.add_object(mri)
if self.view_type() == ViewType.THREE_D:
if left_mesh is not None:
left_mesh.set_color(yellow_color)
self._view.add_object(left_mesh)
if right_mesh is not None:
right_mesh.set_color(yellow_color)
self._view.add_object(right_mesh)
else: # 2D mode
self._temp_object = []
if left_mesh is not None:
left_fus = Object3D.from_fusion(
left_mesh, method='Fusion2DMeshMethod')
left_fus.set_color(yellow_color)
self._temp_object = [left_fus]
self._view.add_object(left_fus)
if right_mesh is not None:
right_fus = Object3D.from_fusion(
right_mesh, method='Fusion2DMeshMethod')
right_fus.set_color(yellow_color)
self._temp_object.append(right_fus)
self._view.add_object(right_fus)
left_gw_mesh = self._viewport_model.observed_objects[
IntraAnalysisParameterNames.LEFT_WHITE_SURFACE]
right_gw_mesh = self._viewport_model.observed_objects[
IntraAnalysisParameterNames.RIGHT_WHITE_SURFACE]
if left_gw_mesh is not None:
left_gw_fus = Object3D.from_fusion(
left_gw_mesh, method='Fusion2DMeshMethod')
left_gw_fus.set_color(gw_color)
self._temp_object.append(left_gw_fus)
self._view.add_object(left_gw_fus)
if right_gw_mesh is not None:
right_gw_fus = Object3D.from_fusion(
right_gw_mesh, method='Fusion2DMeshMethod')
right_gw_fus.set_color(gw_color)
self._temp_object.append(right_gw_fus)
self._view.add_object(right_gw_fus)
def update(self):
self._view.clear()
left_mask = self._viewport_model.observed_objects[
IntraAnalysisParameterNames.LEFT_GREY_WHITE]
right_mask = self._viewport_model.observed_objects[
IntraAnalysisParameterNames.RIGHT_GREY_WHITE]
if left_mask is not None and right_mask is not None:
left_mask.set_color_map(ColorMap.RAINBOW_MASK)
right_mask.set_color_map(ColorMap.RAINBOW_MASK)
mask_fusion = Object3D.from_fusion(
left_mask, right_mask, mode='max_channel', rate=0.5)
mri = self._viewport_model.observed_objects[
IntraAnalysisParameterNames.CORRECTED_MRI]
if mri is not None:
fusion = Object3D.from_fusion(
mri, mask_fusion, mode='linear', rate=0.7)
self._temp_object = fusion
self._view.add_object(fusion)
else:
self._temp_object = mask_fusion
self._view.add_object(mask_fusion)
def update(self):
self._view.clear()
mask = self._viewport_model.observed_objects[IntraAnalysisParameterNames.SPLIT_MASK]
if mask is not None:
mask.set_color_map(ColorMap.RAINBOW_MASK)
mri = self._viewport_model.observed_objects[IntraAnalysisParameterNames.CORRECTED_MRI]
if mri is not None:
fusion = Object3D.from_fusion(mri, mask, mode='linear', rate=0.7)
self._temp_object = fusion
self._view.add_object(fusion)
else:
self._view.add_object(mask)