def _createActions(self, parentWidget):
self.exitProteinAction = NE1_QWidgetAction(parentWidget, win=self.win)
self.exitProteinAction.setText("Exit Protein")
self.exitProteinAction.setIcon(
geticon("ui/actions/Toolbars/Smart/Exit.png"))
self.exitProteinAction.setCheckable(True)
self.buildPeptideAction = NE1_QWidgetAction(parentWidget, win=self.win)
self.buildPeptideAction.setText("Peptide")
self.buildPeptideAction.setCheckable(True)
self.buildPeptideAction.setIcon(
geticon("ui/actions/Tools/Build Structures/Peptide.png"))
self.editRotamersAction = NE1_QWidgetAction(parentWidget, win=self.win)
self.editRotamersAction.setText("Rotamers")
self.editRotamersAction.setCheckable(True)
self.editRotamersAction.setIcon(
geticon("ui/actions/Tools/Build Structures/Rotamer.png"))
self.editResiduesAction = NE1_QWidgetAction(parentWidget, win=self.win)
self.editResiduesAction.setText("Residues")
self.editResiduesAction.setCheckable(True)
self.editResiduesAction.setIcon(
geticon("ui/actions/Tools/Build Structures/Rotamer.png"))
self.displayProteinStyleAction = NE1_QWidgetAction(parentWidget,
win=self.win)
self.displayProteinStyleAction.setText("Edit Style")
self.displayProteinStyleAction.setCheckable(True)
self.displayProteinStyleAction.setIcon(
geticon("ui/actions/Edit/EditProteinDisplayStyle.png"))
def _createActions(self, parentWidget):
self.exitDnaAction = NE1_QWidgetAction(parentWidget, win=self.win)
self.exitDnaAction.setText("Exit DNA")
self.exitDnaAction.setIcon(
geticon("ui/actions/Toolbars/Smart/Exit.png"))
self.exitDnaAction.setCheckable(True)
self.dnaDuplexAction = NE1_QWidgetAction(parentWidget, win=self.win)
self.dnaDuplexAction.setText("Insert DNA")
self.dnaDuplexAction.setCheckable(True)
self.dnaDuplexAction.setIcon(
geticon("ui/actions/Tools/Build Structures/InsertDsDna.png"))
self.breakStrandAction = NE1_QWidgetAction(parentWidget, win=self.win)
self.breakStrandAction.setText("Break Strand")
self.breakStrandAction.setCheckable(True)
self.breakStrandAction.setIcon(
geticon("ui/actions/Command Toolbar/Break_Strand.png"))
self.joinStrandsAction = NE1_QWidgetAction(parentWidget, win=self.win)
self.joinStrandsAction.setText("Join Strands")
self.joinStrandsAction.setCheckable(True)
self.joinStrandsAction.setIcon(
geticon("ui/actions/Command Toolbar/Join_Strands.png"))
self.makeCrossoversAction = NE1_QWidgetAction(parentWidget,
win=self.win)
self.makeCrossoversAction.setText("Crossovers")
self.makeCrossoversAction.setCheckable(True)
self.makeCrossoversAction.setIcon(
geticon("ui/actions/Command Toolbar/Crossover.png"))
self.dnaOrigamiAction = NE1_QWidgetAction(parentWidget, win=self.win)
self.dnaOrigamiAction.setText("Origami")
self.dnaOrigamiAction.setIcon(
geticon("ui/actions/Tools/Build Structures/DNA_Origami.png"))
self.convertPAM3to5Action = NE1_QWidgetAction(parentWidget,
win=self.win)
self.convertPAM3to5Action.setText("PAM3 to PAM5")
self.convertPAM3to5Action.setIcon(
geticon("ui/actions/Command Toolbar/Convert3to5.png"))
self.convertPAM5to3Action = NE1_QWidgetAction(parentWidget,
win=self.win)
self.convertPAM5to3Action.setText("PAM5 to PAM3")
self.convertPAM5to3Action.setIcon(
geticon("ui/actions/Command Toolbar/Convert5to3.png"))
self.orderDnaAction = NE1_QWidgetAction(parentWidget, win=self.win)
self.orderDnaAction.setText("Order DNA")
self.orderDnaAction.setIcon(
geticon("ui/actions/Command Toolbar/Order_DNA.png"))
self.editDnaDisplayStyleAction = NE1_QWidgetAction(parentWidget,
win=self.win)
self.editDnaDisplayStyleAction.setText("Edit Style")
self.editDnaDisplayStyleAction.setCheckable(True)
self.editDnaDisplayStyleAction.setIcon(
geticon("ui/actions/Edit/EditDnaDisplayStyle.png"))
def _createSimulateProteinsActions(self, parentWidget):
"""
Create the actions to be included in flyout toolbar, when the 'Simulate
Proteins' is active.
@see: self._createActions() where this is called.
"""
self.subControlActionGroupForSimulateProtein = QActionGroup(
parentWidget)
# Shouldn't the parent be self.win?
# Isn't parentWidget = BuildProteinPropertyManager?
# Ask Bruce about this. --Mark 2008-12-07.
self.subControlActionGroupForSimulateProtein.setExclusive(True)
self.rosetta_fixedbb_design_Action = \
NE1_QWidgetAction(self.subControlActionGroupForSimulateProtein, win = self.win)
self.rosetta_fixedbb_design_Action.setText("Fixed BB")
self.rosetta_fixedbb_design_Action.setCheckable(True)
self.rosetta_fixedbb_design_Action.setIcon(
geticon(
"ui/actions/Command Toolbar/BuildProtein/FixedBackbone.png"))
self.rosetta_backrub_Action = \
NE1_QWidgetAction(self.subControlActionGroupForSimulateProtein, win = self.win)
self.rosetta_backrub_Action.setText("Backrub")
self.rosetta_backrub_Action.setCheckable(True)
self.rosetta_backrub_Action.setIcon(
geticon("ui/actions/Command Toolbar/BuildProtein/Backrub.png"))
self.editResiduesAction = \
NE1_QWidgetAction(self.subControlActionGroupForSimulateProtein, win = self.win)
self.editResiduesAction.setText("Residues")
self.editResiduesAction.setCheckable(True)
self.editResiduesAction.setIcon(
geticon("ui/actions/Command Toolbar/BuildProtein/Residues.png"))
self.rosetta_score_Action = \
NE1_QWidgetAction(self.subControlActionGroupForSimulateProtein, win = self.win)
self.rosetta_score_Action.setText("Score")
self.rosetta_score_Action.setCheckable(True)
self.rosetta_score_Action.setIcon(
geticon("ui/actions/Command Toolbar/BuildProtein/Score.png"))
self.subControlActionGroupForSimulateProtein.addAction(
self.rosetta_fixedbb_design_Action)
self.subControlActionGroupForSimulateProtein.addAction(
self.rosetta_backrub_Action)
self.subControlActionGroupForSimulateProtein.addAction(
self.editResiduesAction)
self.subControlActionGroupForSimulateProtein.addAction(
self.rosetta_score_Action)
return
def _createActions(self, parentWidget):
"""
Define flyout toolbar actions for this mode.
"""
#@NOTE: In Build mode, some of the actions defined in this method are also
#used in Build Atoms PM. (e.g. bond actions) So probably better to rename
#it as _init_modeActions. Not doing that change in mmkit code cleanup
#commit(other modes still implement a method by same name)-ninad20070717
_superclass._createActions(self, parentWidget)
# The subControlActionGroup is the parent of all flyout QActions.
self.subControlActionGroup = QActionGroup(parentWidget)
# Shouldn't the parent be self.win?
# Isn't parentWidget = BuildAtomsPropertyManager.
# Ask Bruce about this. --Mark 2008-12-07.
self.subControlActionGroup.setExclusive(True)
#Following Actions are added in the Flyout toolbar.
#Defining them outside that method as those are being used
#by the subclasses of deposit mode (testmode.py as of 070410) -- ninad
self.atomsToolAction = \
NE1_QWidgetAction(self.subControlActionGroup, win = self.win)
self.atomsToolAction.setText("Atoms Tool")
self.atomsToolAction.setIcon(
geticon("ui/actions/Command Toolbar/BuildAtoms/AtomsTool.png"))
self.atomsToolAction.setCheckable(True)
self.atomsToolAction.setChecked(True)
self.atomsToolAction.setObjectName('ACTION_ATOMS_TOOL')
self.bondsToolAction = \
NE1_QWidgetAction(self.subControlActionGroup, win = self.win)
self.bondsToolAction.setText("Bonds Tool")
self.bondsToolAction.setIcon(
geticon("ui/actions/Command Toolbar/BuildAtoms/BondsTool.png"))
self.bondsToolAction.setCheckable(True)
self.bondsToolAction.setObjectName('ACTION_BOND_TOOL')
self.subControlActionGroup.addAction(self.atomsToolAction)
self.subControlActionGroup.addAction(self.bondsToolAction)
self.transmuteAtomsAction = \
NE1_QWidgetAction(self.subControlActionGroup, win = self.win)
self.transmuteAtomsAction.setText("Transmute Atoms")
self.transmuteAtomsAction.setIcon(
geticon(
"ui/actions/Command Toolbar/BuildAtoms/TransmuteAtoms.png"))
self.transmuteAtomsAction.setCheckable(False)
self._createBondToolActions(parentWidget)
def _createActions(self, parentWidget):
self.exitNanotubeAction = NE1_QWidgetAction(parentWidget, win=self.win)
self.exitNanotubeAction.setText("Exit NT")
self.exitNanotubeAction.setIcon(
geticon("ui/actions/Toolbars/Smart/Exit.png"))
self.exitNanotubeAction.setCheckable(True)
self.insertNanotubeAction = NE1_QWidgetAction(parentWidget,
win=self.win)
self.insertNanotubeAction.setText("Insert NT")
self.insertNanotubeAction.setCheckable(True)
self.insertNanotubeAction.setIcon(
geticon("ui/actions/Tools/Build Structures/InsertNanotube.png"))
def _createActions(self, parentWidget):
"""
Define flyout toolbar actions for this mode.
"""
_superclass._createActions(self, parentWidget)
#Urmi 20080814: show this flyout toolbar only when rosetta plugin path
# is there
#Probably only rosetta_enabled_prefs_key check would have sufficed
plugin_name = "ROSETTA"
plugin_prefs_keys = (rosetta_enabled_prefs_key, rosetta_path_prefs_key)
errorcode, errortext_or_path = \
checkPluginPreferences(plugin_name, plugin_prefs_keys, ask_for_help = False)
#print "Error code =", errorcode, errortext_or_path
if errorcode == 0:
self.rosetta_enabled = True
else:
self.rosetta_enabled = False
# The subControlActionGroup is the parent of all flyout QActions.
self.subControlActionGroup = QActionGroup(parentWidget)
# Shouldn't the parent be self.win?
# Isn't parentWidget = BuildProteinPropertyManager?
# Ask Bruce about this. --Mark 2008-12-07.
self.subControlActionGroup.setExclusive(True)
self.modelProteinAction = \
NE1_QWidgetAction(self.subControlActionGroup, win = self.win)
self.modelProteinAction.setText("Model")
self.modelProteinAction.setIcon(geticon(
'ui/actions/Command Toolbar/BuildProtein/ModelProtein.png'))
self.modelProteinAction.setCheckable(True)
self.modelProteinAction.setChecked(True)
self.modelProteinAction.setObjectName('ACTION_MODEL_PROTEINS')
self.simulateProteinAction = \
NE1_QWidgetAction(self.subControlActionGroup, win = self.win)
self.simulateProteinAction.setText("Simulate")
self.simulateProteinAction.setIcon(geticon(
"ui/actions/Command Toolbar/BuildProtein/Simulate.png"))
self.simulateProteinAction.setCheckable(True)
self.simulateProteinAction.setObjectName('ACTION_SIMULATE_PROTEINS')
self.subControlActionGroup.addAction(self.modelProteinAction)
self.subControlActionGroup.addAction(self.simulateProteinAction)
self._createModelProteinsActions(parentWidget)
self._createSimulateProteinsActions(parentWidget)
def _createModelProteinsActions(self, parentWidget):
"""
Create the actions to be included in flyout toolbar, when the 'Model
Proteins' is active.
@see: self._createActions() where this is called.
"""
self.subControlActionGroupForModelProtein = QActionGroup(parentWidget)
# Shouldn't the parent be self.win?
# Isn't parentWidget = BuildProteinPropertyManager?
# Ask Bruce about this. --Mark 2008-12-07.
self.subControlActionGroupForModelProtein.setExclusive(True)
self.buildPeptideAction = \
NE1_QWidgetAction(self.subControlActionGroupForModelProtein, win = self.win)
self.buildPeptideAction.setText("Insert Peptide")
self.buildPeptideAction.setCheckable(True)
self.buildPeptideAction.setIcon(
geticon(
"ui/actions/Command Toolbar/BuildProtein/InsertPeptide.png"))
self.compareProteinsAction = \
NE1_QWidgetAction(self.subControlActionGroupForModelProtein, win = self.win)
self.compareProteinsAction.setText("Compare")
self.compareProteinsAction.setCheckable(True)
self.compareProteinsAction.setIcon(
geticon("ui/actions/Command Toolbar/BuildProtein/Compare.png"))
self.displayProteinStyleAction = \
NE1_QWidgetAction(self.subControlActionGroupForModelProtein, win = self.win)
self.displayProteinStyleAction.setText("Edit Style")
self.displayProteinStyleAction.setCheckable(True)
self.displayProteinStyleAction.setIcon(
geticon(
"ui/actions/Command Toolbar/BuildProtein/EditProteinDisplayStyle.png"
))
self.subControlActionGroupForModelProtein.addAction(
self.buildPeptideAction)
self.subControlActionGroupForModelProtein.addAction(
self.displayProteinStyleAction)
self.subControlActionGroupForModelProtein.addAction(
self.compareProteinsAction)
return
def getFlyoutActionList(self): #Ninad 20070618
""" Returns a tuple that contains mode spcific actionlists in the
added in the flyout toolbar of the mode.
CommandToolbar._createFlyoutToolBar method calls this
@return: params: A tuple that contains 3 lists:
(subControlAreaActionList, commandActionLists, allActionsList)"""
#'allActionsList' returns all actions in the flyout toolbar
#including the subcontrolArea actions
allActionsList = []
#Action List for subcontrol Area buttons.
#In this mode, there is really no subcontrol area.
#We will treat subcontrol area same as 'command area'
#(subcontrol area buttons will have an empty list as their command area
#list). We will set the Comamnd Area palette background color to the
#subcontrol area.
subControlAreaActionList = []
self.exitMoveAction = NE1_QWidgetAction(self.w, win=self.w)
self.exitMoveAction.setText("Exit Move")
self.exitMoveAction.setWhatsThis("Exits Move Mode")
self.exitMoveAction.setCheckable(True)
self.exitMoveAction.setChecked(True)
self.exitMoveAction.setIcon(
geticon("ui/actions/Toolbars/Smart/Exit.png"))
subControlAreaActionList.append(self.exitMoveAction)
separator = QtGui.QAction(self.w)
separator.setSeparator(True)
subControlAreaActionList.append(separator)
subControlAreaActionList.append(self.w.toolsMoveMoleculeAction)
subControlAreaActionList.append(self.w.rotateComponentsAction)
subControlAreaActionList.append(self.w.modifyAlignCommonAxisAction)
allActionsList.extend(subControlAreaActionList)
#Empty actionlist for the 'Command Area'
commandActionLists = []
#Append empty 'lists' in 'commandActionLists equal to the
#number of actions in subControlArea
for i in range(len(subControlAreaActionList)):
lst = []
commandActionLists.append(lst)
params = (subControlAreaActionList, commandActionLists, allActionsList)
return params
def getFlyoutActionList(self): #Ninad 20070618
"""
Returns custom actionlist that will be used in a specific mode
or editing a feature etc Example: while in movie mode,
the _createFlyoutToolBar method calls
this.
"""
#'allActionsList' returns all actions in the flyout toolbar
#including the subcontrolArea actions
allActionsList = []
#Action List for subcontrol Area buttons.
#In this mode there is really no subcontrol area.
#We will treat subcontrol area same as 'command area'
#(subcontrol area buttons will have an empty list as their command area
#list). We will set the Comamnd Area palette background color to the
#subcontrol area.
subControlAreaActionList = []
self.exitMovieAction = NE1_QWidgetAction(self.w, win=self.w)
self.exitMovieAction.setText("Exit Movie")
self.exitMovieAction.setWhatsThis("Exits Movie Mode")
self.exitMovieAction.setCheckable(True)
self.exitMovieAction.setChecked(True)
self.exitMovieAction.setIcon(
geticon("ui/actions/Toolbars/Smart/Exit.png"))
subControlAreaActionList.append(self.exitMovieAction)
separator = QAction(self.w)
separator.setSeparator(True)
subControlAreaActionList.append(separator)
subControlAreaActionList.append(self.w.simPlotToolAction)
allActionsList.extend(subControlAreaActionList)
#Empty actionlist for the 'Command Area'
commandActionLists = []
#Append empty 'lists' in 'commandActionLists equal to the
#number of actions in subControlArea
for i in range(len(subControlAreaActionList)):
lst = []
commandActionLists.append(lst)
params = (subControlAreaActionList, commandActionLists, allActionsList)
return params
def _createActions(self, parentWidget):
_superclass._createActions(self, parentWidget)
self.subControlActionGroup = QtGui.QActionGroup(self.parentWidget)
self.subControlActionGroup.setExclusive(False)
self.insertNanotubeAction = \
NE1_QWidgetAction(self.subControlActionGroup,
win = self.win)
self.insertNanotubeAction.setText("Insert NT")
self.insertNanotubeAction.setCheckable(True)
self.insertNanotubeAction.setIcon(
geticon("ui/actions/Tools/Build Structures/InsertNanotube.png"))
self.subControlActionGroup.addAction(self.insertNanotubeAction)
def _createActions(self, parentWidget):
"""
Define flyout toolbar actions for this mode.
@see: self._getExitActionText() which defines text for exit action.
@note: subclasses typically extend this method to define more actions.
"""
#@NOTE: In Build mode, some of the actions defined in this method are also
#used in Build Atoms PM. (e.g. bond actions) So probably better to rename
#it as _init_modeActions. Not doing that change in mmkit code cleanup
#commit(other modes still implement a method by same name)-ninad20070717
self.exitModeAction = NE1_QWidgetAction(parentWidget, win=self.win)
exitActionText = self._getExitActionText()
self.exitModeAction.setText(exitActionText)
self.exitModeAction.setIcon(
geticon('ui/actions/Command Toolbar/ControlArea/Exit.png'))
self.exitModeAction.setCheckable(True)
self.exitModeAction.setChecked(True)
def _createActions(self, parentWidget):
self.exitProteinAction = NE1_QWidgetAction(parentWidget, win=self.win)
self.exitProteinAction.setText("Exit Protein")
self.exitProteinAction.setIcon(
geticon("ui/actions/Command Toolbar/ControlArea/Exit.png"))
self.exitProteinAction.setCheckable(True)
self.buildPeptideAction = NE1_QWidgetAction(parentWidget, win=self.win)
self.buildPeptideAction.setText("Insert Peptide")
self.buildPeptideAction.setCheckable(True)
self.buildPeptideAction.setIcon(
geticon(
"ui/actions/Command Toolbar/BuildProtein/InsertPeptide.png"))
self.editRotamersAction = NE1_QWidgetAction(parentWidget, win=self.win)
self.editRotamersAction.setText("Rotamers")
self.editRotamersAction.setCheckable(True)
self.editRotamersAction.setIcon(
geticon("ui/actions/Command Toolbar/BuildProtein/Rotamers.png"))
self.editResiduesAction = NE1_QWidgetAction(parentWidget, win=self.win)
self.editResiduesAction.setText("Residues")
self.editResiduesAction.setCheckable(True)
self.editResiduesAction.setIcon(
geticon("ui/actions/Command Toolbar/BuildProtein/Residues.png"))
self.compareProteinsAction = NE1_QWidgetAction(parentWidget,
win=self.win)
self.compareProteinsAction.setText("Compare")
self.compareProteinsAction.setCheckable(True)
self.compareProteinsAction.setIcon(
geticon("ui/actions/Command Toolbar/BuildProtein/Compare.png"))
self.displayProteinStyleAction = NE1_QWidgetAction(parentWidget,
win=self.win)
self.displayProteinStyleAction.setText("Edit Style")
self.displayProteinStyleAction.setCheckable(True)
self.displayProteinStyleAction.setIcon(
geticon(
"ui/actions/Command Toolbar/BuildProtein/EditProteinDisplayStyle.png"
))
self.subControlActionGroup = QtGui.QActionGroup(self.parentWidget)
self.subControlActionGroup.setExclusive(False)
self.subControlActionGroup.addAction(self.buildPeptideAction)
self.subControlActionGroup.addAction(self.displayProteinStyleAction)
def _createActions(self, parentWidget):
_superclass._createActions(self, parentWidget)
# The subControlActionGroup is the parent of all flyout QActions.
self.subControlActionGroup = QtGui.QActionGroup(parentWidget)
self._subControlAreaActionList.append(self.exitModeAction)
separator = QtGui.QAction(parentWidget)
separator.setSeparator(True)
self._subControlAreaActionList.append(separator)
self.polygonShapeAction = NE1_QWidgetAction(self.subControlActionGroup,
win=self.win)
self.polygonShapeAction.setObjectName("DEFAULT")
self.polygonShapeAction.setText("Polygon")
self._subControlAreaActionList.append(self.polygonShapeAction)
self.circleShapeAction = NE1_QWidgetAction(self.subControlActionGroup,
win=self.win)
self.circleShapeAction.setObjectName("CIRCLE")
self.circleShapeAction.setText("Circle")
self._subControlAreaActionList.append(self.circleShapeAction)
self.squareShapeAction = NE1_QWidgetAction(self.subControlActionGroup,
win=self.win)
self.squareShapeAction.setObjectName("SQUARE")
self.squareShapeAction.setText("Square")
self._subControlAreaActionList.append(self.squareShapeAction)
self.rectCtrShapeAction = NE1_QWidgetAction(self.subControlActionGroup,
win=self.win)
self.rectCtrShapeAction.setObjectName("RECTANGLE")
self.rectCtrShapeAction.setText("RectCenter")
self._subControlAreaActionList.append(self.rectCtrShapeAction)
self.rectCornersShapeAction = NE1_QWidgetAction(
self.subControlActionGroup, win=self.win)
self.rectCornersShapeAction.setObjectName("RECT_CORNER")
self.rectCornersShapeAction.setText("RectCorners")
self._subControlAreaActionList.append(self.rectCornersShapeAction)
self.triangleShapeAction = NE1_QWidgetAction(
self.subControlActionGroup, win=self.win)
self.triangleShapeAction.setObjectName("TRIANGLE")
self.triangleShapeAction.setText("Triangle")
self._subControlAreaActionList.append(self.triangleShapeAction)
self.diamondShapeAction = NE1_QWidgetAction(self.subControlActionGroup,
win=self.win)
self.diamondShapeAction.setObjectName("DIAMOND")
self.diamondShapeAction.setText("Diamond")
self._subControlAreaActionList.append(self.diamondShapeAction)
self.hexagonShapeAction = NE1_QWidgetAction(self.subControlActionGroup,
win=self.win)
self.hexagonShapeAction.setObjectName("HEXAGON")
self.hexagonShapeAction.setText("Hexagon")
self._subControlAreaActionList.append(self.hexagonShapeAction)
self.lassoShapeAction = NE1_QWidgetAction(self.subControlActionGroup,
win=self.win)
self.lassoShapeAction.setObjectName("LASSO")
self.lassoShapeAction.setText("Lasso")
self._subControlAreaActionList.append(self.lassoShapeAction)
for action in self._subControlAreaActionList[1:]:
if isinstance(action, NE1_QWidgetAction):
action.setCheckable(True)
self.subControlActionGroup.addAction(action)
iconpath = "ui/actions/Command Toolbar/BuildCrystal/" + str(
action.text()) + ".png"
action.setIcon(geticon(iconpath))
if not self.subControlActionGroup.checkedAction():
self.polygonShapeAction.setChecked(True)
return
def _createBondToolActions(self, parentWidget):
"""
Create the actions to be included in flyout toolbar , when the 'bonds
tool' is active. Note that the object names of these action will be
be used to find the Bond Tool type to which each action corresponds to.
@see: self._createActions() where this is called.
"""
self.bondToolsActionGroup = QActionGroup(parentWidget)
self.bondToolsActionGroup.setExclusive(True)
self.bond1Action = \
NE1_QWidgetAction(self.bondToolsActionGroup, win = self.win)
self.bond1Action.setText("Single")
self.bond1Action.setIcon(
geticon("ui/actions/Command Toolbar/BuildAtoms/SingleBond.png"))
self.bond1Action.setObjectName('ACTION_SINGLE_BOND_TOOL')
self.bond2Action = \
NE1_QWidgetAction(self.bondToolsActionGroup, win = self.win)
self.bond2Action.setText("Double")
self.bond2Action.setIcon(
geticon("ui/actions/Command Toolbar/BuildAtoms/DoubleBond.png"))
self.bond2Action.setObjectName('ACTION_DOUBLE_BOND_TOOL')
self.bond3Action = \
NE1_QWidgetAction(self.bondToolsActionGroup, win = self.win)
self.bond3Action.setText("Triple")
self.bond3Action.setIcon(
geticon("ui/actions/Command Toolbar/BuildAtoms/TripleBond.png"))
self.bond3Action.setObjectName('ACTION_TRIPLE_BOND_TOOL')
self.bondaAction = \
NE1_QWidgetAction(self.bondToolsActionGroup, win = self.win)
self.bondaAction.setText("Aromatic")
self.bondaAction.setIcon(
geticon("ui/actions/Command Toolbar/BuildAtoms/AromaticBond.png"))
self.bondaAction.setObjectName('ACTION_AROMATIC_BOND_TOOL')
self.bondgAction = \
NE1_QWidgetAction(self.bondToolsActionGroup, win = self.win)
self.bondgAction.setText("Graphitic")
self.bondgAction.setIcon(
geticon("ui/actions/Command Toolbar/BuildAtoms/GraphiticBond.png"))
self.bondgAction.setObjectName('ACTION_GRAPHITIC_BOND_TOOL')
self.cutBondsAction = \
NE1_QWidgetAction(self.bondToolsActionGroup, win = self.win)
self.cutBondsAction.setText("Cut Bonds")
self.cutBondsAction.setIcon(
geticon("ui/actions/Command Toolbar/BuildAtoms/CutBonds.png"))
self.cutBondsAction.setObjectName('ACTION_DELETE_BOND_TOOL')
for action in [
self.bond1Action, self.bond2Action, self.bond3Action,
self.bondaAction, self.bondgAction, self.cutBondsAction
]:
self.bondToolsActionGroup.addAction(action)
action.setCheckable(True)
return
def _createActions(self, parentWidget):
"""
Overrides superclass method
"""
_superclass._createActions(self, parentWidget)
# The subControlActionGroup is the parent of all flyout QActions.
self.subControlActionGroup = QtGui.QActionGroup(self.parentWidget)
# Shouldn't the parent be self.win?
# IIRC, parentWidget = BuildDnaPropertyManager.
# Ask Bruce about this. --Mark 2008-12-07.
self.subControlActionGroup.setExclusive(False)
self.dnaDuplexAction = NE1_QWidgetAction(self.subControlActionGroup,
win=self.win)
self.dnaDuplexAction.setText("Insert DNA")
self.dnaDuplexAction.setCheckable(True)
self.dnaDuplexAction.setIcon(
geticon("ui/actions/Command Toolbar/BuildDna/InsertDna.png"))
self.breakStrandAction = NE1_QWidgetAction(self.subControlActionGroup,
win=self.win)
self.breakStrandAction.setText("Break Strand")
self.breakStrandAction.setCheckable(True)
self.breakStrandAction.setIcon(
geticon("ui/actions/Command Toolbar/BuildDna/BreakStrand.png"))
self.joinStrandsAction = NE1_QWidgetAction(self.subControlActionGroup,
win=self.win)
self.joinStrandsAction.setText("Join Strands")
self.joinStrandsAction.setCheckable(True)
self.joinStrandsAction.setIcon(
geticon("ui/actions/Command Toolbar/BuildDna/JoinStrands.png"))
self.makeCrossoversAction = NE1_QWidgetAction(
self.subControlActionGroup, win=self.win)
self.makeCrossoversAction.setText("Crossovers")
self.makeCrossoversAction.setCheckable(True)
self.makeCrossoversAction.setIcon(
geticon("ui/actions/Command Toolbar/BuildDna/MakeCrossovers.png"))
self.dnaOrigamiAction = NE1_QWidgetAction(self.subControlActionGroup,
win=self.win)
self.dnaOrigamiAction.setText("Origami")
self.dnaOrigamiAction.setIcon(
geticon("ui/actions/Tools/Build Structures/DNA_Origami.png"))
self.convertDnaAction = NE1_QWidgetAction(self.subControlActionGroup,
win=self.win)
self.convertDnaAction.setText("Convert")
self.convertDnaAction.setIcon(
geticon("ui/actions/Command Toolbar/BuildDna/ConvertDna.png"))
self.orderDnaAction = NE1_QWidgetAction(self.subControlActionGroup,
win=self.win)
self.orderDnaAction.setText("Order DNA")
self.orderDnaAction.setIcon(
geticon("ui/actions/Command Toolbar/BuildDna/OrderDna.png"))
self.editDnaDisplayStyleAction = NE1_QWidgetAction(
self.subControlActionGroup, win=self.win)
self.editDnaDisplayStyleAction.setText("Edit Style")
self.editDnaDisplayStyleAction.setCheckable(True)
self.editDnaDisplayStyleAction.setIcon(
geticon(
"ui/actions/Command Toolbar/BuildDna/EditDnaDisplayStyle.png"))
# Add the actions.
self.subControlActionGroup.addAction(self.dnaDuplexAction)
self.subControlActionGroup.addAction(self.breakStrandAction)
self.subControlActionGroup.addAction(self.joinStrandsAction)
self.subControlActionGroup.addAction(self.makeCrossoversAction)
self.subControlActionGroup.addAction(self.editDnaDisplayStyleAction)
def _init_flyoutActions(self):
"""
Define flyout toolbar actions for this command
"""
#Create an action group and add all the cookie selection shape buttons to it
self.cookieSelectionGroup = QActionGroup(self.w)
#Action List for subcontrol Area buttons.
#In cookie cutter, there is really no subcontrol area.
#We will treat subcontrol area same as 'command area'
#(subcontrol area buttons will have an empty list as their command area
#list). We will set the Comamnd Area palette background color to the
#subcontrol area. This list will be used in getFlyoutActionList
self.subControlAreaActionList = []
self.exitCrystalAction = NE1_QWidgetAction(self.w, win=self.w)
self.exitCrystalAction.setText("Exit Crystal")
self.exitCrystalAction.setCheckable(True)
self.exitCrystalAction.setChecked(True)
self.exitCrystalAction.setIcon(
geticon('ui/actions/Toolbars/Smart/Exit.png'))
self.subControlAreaActionList.append(self.exitCrystalAction)
separator = QtGui.QAction(self.w)
separator.setSeparator(True)
self.subControlAreaActionList.append(separator)
self.DefaultSelAction = NE1_QWidgetAction(self.w, win=self.w)
self.DefaultSelAction.setObjectName("DEFAULT")
self.DefaultSelAction.setText("Default")
self.subControlAreaActionList.append(self.DefaultSelAction)
self.DefaultSelAction.setToolTip("Default Selection (D)")
self.DefaultSelAction.setWhatsThis("""<b>Default </b>
<p>
Defines the crystal shape as a polygon with the user specifying the
sides
</p>""")
self.CircleSelAction = NE1_QWidgetAction(self.w, win=self.w)
self.CircleSelAction.setObjectName("CIRCLE")
self.CircleSelAction.setText("Circle")
self.subControlAreaActionList.append(self.CircleSelAction)
self.CircleSelAction.setToolTip("Circle (C)")
self.CircleSelAction.setWhatsThis("""<b>Circle </b>
<p>
Draws the crystal geometry as a circle
</p>""")
self.RectCtrSelAction = NE1_QWidgetAction(self.w, win=self.w)
self.RectCtrSelAction.setObjectName("RECTANGLE")
self.RectCtrSelAction.setText("RectCenter")
self.subControlAreaActionList.append(self.RectCtrSelAction)
self.RectCtrSelAction.setToolTip("Rectangular Center (R)")
self.RectCtrSelAction.setWhatsThis("""<b>Rectangle - Center Select</b>
<p>
Draws the crystal geometry as a rectangle with the cursor defining
the center of the rectangle
</p>""")
self.HexagonSelAction = NE1_QWidgetAction(self.w, win=self.w)
self.HexagonSelAction.setObjectName("HEXAGON")
self.HexagonSelAction.setText("Hexagon")
self.subControlAreaActionList.append(self.HexagonSelAction)
self.HexagonSelAction.setToolTip("Hexagon (H)")
self.HexagonSelAction.setWhatsThis("""<b>Hexagon </b>
<p>
Draws the crystal geometry as a hexagon
</p>""")
self.TriangleSelAction = NE1_QWidgetAction(self.w, win=self.w)
self.TriangleSelAction.setObjectName("TRIANGLE")
self.TriangleSelAction.setText("Triangle")
self.subControlAreaActionList.append(self.TriangleSelAction)
self.TriangleSelAction.setToolTip("Triangle (T)")
self.TriangleSelAction.setWhatsThis("""<b>Triangle </b>
<p>
Draws the crystal geometry as a triangle
</p>""")
self.RectCornerSelAction = NE1_QWidgetAction(self.w, win=self.w)
self.RectCornerSelAction.setObjectName("RECT_CORNER")
self.RectCornerSelAction.setText("RectCorners")
self.subControlAreaActionList.append(self.RectCornerSelAction)
self.RectCornerSelAction.setToolTip("Rectangular Corner (Shift+R)")
self.RectCornerSelAction.setWhatsThis(
"""<b>Rectangle - Corner Select</b>
<p>
Draws the crystal geometry as a rectangle with the cursor defining
the initial corner
</p>""")
self.LassoSelAction = NE1_QWidgetAction(self.w, win=self.w)
self.LassoSelAction.setObjectName("LASSO")
self.LassoSelAction.setText("Lasso")
self.subControlAreaActionList.append(self.LassoSelAction)
self.LassoSelAction.setToolTip("Lasso (L)")
self.LassoSelAction.setWhatsThis("""<b>Lasso</b>
<p>
Can be used to draw irregular crystal geometries
</p>""")
self.DiamondSelAction = NE1_QWidgetAction(self.w, win=self.w)
self.DiamondSelAction.setObjectName("DIAMOND")
self.DiamondSelAction.setText("Diamond")
self.subControlAreaActionList.append(self.DiamondSelAction)
self.DiamondSelAction.setToolTip("Diamond (D)")
self.DiamondSelAction.setWhatsThis("""<b>Diamond</b>
<p>
Draws the crystal geometry as a diamond
</p>""")
self.SquareSelAction = NE1_QWidgetAction(self.w, win=self.w)
self.SquareSelAction.setObjectName("SQUARE")
self.SquareSelAction.setText("Square")
self.subControlAreaActionList.append(self.SquareSelAction)
self.SquareSelAction.setToolTip("Square(S)")
self.SquareSelAction.setWhatsThis("""<b>Square</b>
<p>
Draws the crystal geometry as a square
</p>""")
for action in self.subControlAreaActionList[1:]:
if isinstance(action, QtGui.QWidgetAction):
action.setCheckable(True)
self.cookieSelectionGroup.addAction(action)
iconpath = "ui/actions/Toolbars/Smart/" + str(
action.text()) + ".png"
action.setIcon(geticon(iconpath))
if not self.cookieSelectionGroup.checkedAction():
self.DefaultSelAction.setChecked(True)
