class NerService(tornado.web.RequestHandler):
def initialize(self, concepts_inlinks, stopwords, entities, inlinks_threshold=400, MAX_WORDS=400, MAX_CHARS=2000):
"""
"""
self.MAX_WORDS = MAX_WORDS
self.MAX_CHARS = MAX_CHARS
self.ner = Ner(concepts_inlinks, entities, stopwords, inlinks_threshold=inlinks_threshold, max_words=MAX_WORDS)
def get(self):
# Get parameters
inlinks_threshold = int(self.get_argument("inlinks_threshold", default=400))
self.ner.inlinks_threshold=inlinks_threshold
text = self.get_argument("text")
debug = self.get_argument("debug", default=False)
# Check warnings if exists
warning = []
if len(text) > self.MAX_CHARS:
warning.append('Only the first %d chars will be processed. This request is over this limit.' % self.MAX_CHARS)
if len(text.split(' ')) > self.MAX_WORDS:
warning.append('Only the first %d words will be processed. This request is over this limit.' % self.MAX_WORDS)
#result = json.loads(self.ner.fetch_entities(text))
result = self.ner.fetch_entities(text)
# Erase text at response
del(result['text'])
# if exists warning, append the flags to the output
if len(warning) > 0:
result['warnings'] = warning
if debug:
self.write(result)
else:
self.write({"concepts": list(result["results"].keys())})
def post(self):
results = list()
for line in str(self.request.body, 'utf8').split('\n'):
if line:
fields = line.split('\t')
text = fields[0]
#concepts = self.__format_post_result(self.ner.fetch_entities(text))
concepts = self.ner.fetch_entities(text)
print(concepts['results'])
#result_fields = [concepts] + fields
#result = '\t'.join(result_fields)
concept_names = list(concepts['results'].keys())
results.append({"text":text, "concepts":concept_names})
#for temp in results:
# self.write('%s\n' % (temp))
print(results)
self.write({"response":results})
def __format_post_result(self, response):
response_dict = json.loads(response)
concepts = response_dict['results'].keys()
if concepts:
return ";;".join(concepts)
else:
return ""
def initialize(self,
concepts_inlinks,
stopwords,
inlinks_threshold=400,
MAX_WORDS=400,
MAX_CHARS=2000):
"""
"""
self.MAX_WORDS = MAX_WORDS
self.MAX_CHARS = MAX_CHARS
self.inlinks_threshold = inlinks_threshold
self.ner = Ner(concepts_inlinks,
stopwords,
inlinks_threshold=inlinks_threshold,
max_words=MAX_WORDS)
def initializeNer():
concepts_inlinks = {}
stopwords = set()
entities = set()
logging.info("Loading concepts...")
with (open('../services/concept_service/data/pagelinks_all.tsv',
encoding='utf-8',
errors='ignore')) as concepts_file:
for concept in concepts_file.readlines():
parts = concept.split('\t')
concepts_inlinks[parts[0]] = parts[1]
logging.info("%s concepts loaded." % len(concepts_inlinks))
logging.info("Loading stopwords...")
with (open('../services/concept_service/data/stopwords.txt',
encoding='utf-8',
errors='ignore')) as sw_file:
for sw in sw_file:
stopwords.add(sw.replace('\n', '').lower())
logging.info("%s stopwords loaded." % len(stopwords))
return Ner(concepts_inlinks,
entities,
stopwords,
inlinks_threshold=400,
max_words=500)
def main():
# for docker docker.json
if DOCKER_ENV in os.environ:
cfg_path = './config/docker.json'
else:
cfg_path = './config/dev.json'
# 1.
config_processor = ConfigProcessor(cfg_path)
cfg = config_processor.get_configs()
print(cfg)
global STORAGE_PATH
STORAGE_PATH = cfg['local_storage_path']
# 2. Ner
ner_model = Ner('./ml/devlabs_ner_ontonotes_bert.json')
#ret = ner_model.handle_file('/home/neurus/Projects/rvision-hackathon-2021-q1/converted/2020/11-2020-Chaes-e-commerce-malware-research.pdf.txt')
#print(ret)
# 3. RabbitMq
amqp_processor = AmqpProcessor(cfg['rabbit_mq'])
# 4. DB
pgdb = PostgreSqlDatabase(cfg)
# 5. Start to listen incoming messages
try:
channel = amqp_processor.establish_connection(
create_callback(ner_model, pgdb))
channel.start_consuming()
except:
pgdb.close()
amqp_processor.close_connection()
def initialize(self, concepts_inlinks, stopwords, entities, inlinks_threshold=400, MAX_WORDS=400, MAX_CHARS=2000):
"""
"""
self.MAX_WORDS = MAX_WORDS
self.MAX_CHARS = MAX_CHARS
self.ner = Ner(concepts_inlinks, entities, stopwords, inlinks_threshold=inlinks_threshold, max_words=MAX_WORDS)
default=3,
help=
'size of synthesized data. size of total data = (augment_size + 1) * the original data size'
)
parser.add_argument('--seed', type=int, default=42, help='random seed')
if __name__ == '__main__':
args = parser.parse_args()
file_name = args.file_name
dedup = args.dedup
augment_size = args.augment_size
seed = args.seed
ner = Ner(ner_dir_name='.',
ignore_tag_list=['O'],
data_augument_tag_list=data_augument_tag_list,
augment_size=augment_size,
seed=seed,
dedup=dedup)
aug_samples, aug_sample_tags = ner.augment(file_name='%s.txt' % file_name)
if dedup:
target_dir = 'aug_dedup_%d' % augment_size
else:
target_dir = 'aug_%d' % augment_size
if not os.path.exists(target_dir):
os.makedirs(target_dir)
with open(os.path.join(target_dir, '%s.txt' % file_name),
'w',
encoding='utf-8') as f:
for tokens, tags in zip(aug_samples, aug_sample_tags):
class NerService(tornado.web.RequestHandler):
def initialize(self,
concepts_inlinks,
stopwords,
inlinks_threshold=400,
MAX_WORDS=400,
MAX_CHARS=2000):
"""
"""
self.MAX_WORDS = MAX_WORDS
self.MAX_CHARS = MAX_CHARS
self.inlinks_threshold = inlinks_threshold
self.ner = Ner(concepts_inlinks,
stopwords,
inlinks_threshold=inlinks_threshold,
max_words=MAX_WORDS)
def get(self):
# Get parameters
inlinks_threshold = int(
self.get_argument("inlinks_threshold",
default=self.inlinks_threshold))
self.ner.inlinks_threshold = inlinks_threshold
text = self.get_argument("text")
debug = self.get_argument("debug", default=False)
# Check warnings if exists
warning = []
if len(text) > self.MAX_CHARS:
warning.append(
'Only the first %d chars will be processed. This request is over this limit.'
% self.MAX_CHARS)
if len(text.split(' ')) > self.MAX_WORDS:
warning.append(
'Only the first %d words will be processed. This request is over this limit.'
% self.MAX_WORDS)
result = self.ner.fetch_entities(text)
# Erase text at response
del (result['text'])
# if exists warning, append the flags to the output
if len(warning) > 0:
result['warnings'] = warning
if debug:
self.write(result)
else:
self.write({"concepts": list(result["results"].keys())})
def post(self):
results = list()
for line in str(self.request.body, 'utf8').split('\n'):
if line:
fields = line.split('\t')
text = fields[0]
concepts = self.ner.fetch_entities(text)
concept_names = list(concepts['results'].keys())
results.append({"text": text, "concepts": concept_names})
self.write({"response": results})
def __format_post_result(self, response):
response_dict = json.loads(response)
concepts = response_dict['results'].keys()
if concepts:
return ";;".join(concepts)
else:
return ""
def setUp(self):
# self.ner = BertNer() #Your implementation of NER
self.input_file = 'ner_test_input.txt'
self.output_file = 'ner_test_output.txt'
self.pred = Ner.predict(self.input_file)