def test_get_local_bifurcation_angles(self): _close(_nrt.local_bifurcation_angles(self.sec_nrn), get('local_bifurcation_angles', self.ref_nrn)) for t in NeuriteType: _close(_nrt.local_bifurcation_angles(self.sec_nrn, neurite_type=t), get('local_bifurcation_angles', self.ref_nrn, neurite_type=t)) ba = [_bf.local_bifurcation_angle(b) for b in i_chain2(self.sec_nrn_trees, iterator_type=Section.ibifurcation_point)] _close(ba, get('local_bifurcation_angles', self.ref_nrn))
def test_local_bifurcation_angles(): ref_local_bifangles = list(nf.local_bifurcation_angles(NEURON)) local_bifangles = get_feature('local_bifurcation_angles', NEURON) nt.eq_(len(local_bifangles), 40) assert_allclose(local_bifangles, ref_local_bifangles) local_bifangles = get_feature('local_bifurcation_angles', NEURON, neurite_type=NeuriteType.all) nt.eq_(len(local_bifangles), 40) assert_allclose(local_bifangles, ref_local_bifangles) s = get_feature('local_bifurcation_angles', NEURON, neurite_type=NeuriteType.axon) nt.eq_(len(s), 10) s = get_feature('local_bifurcation_angles', NEURON, neurite_type=NeuriteType.basal_dendrite) nt.eq_(len(s), 20) s = get_feature('local_bifurcation_angles', NEURON, neurite_type=NeuriteType.apical_dendrite) nt.eq_(len(s), 10)
def test_local_bifurcation_angles(): ref_local_bifangles = list(nf.local_bifurcation_angles(NEURON)) local_bifangles = get_feature('local_bifurcation_angles', NEURON) assert len(local_bifangles) == 40 assert_allclose(local_bifangles, ref_local_bifangles) local_bifangles = get_feature('local_bifurcation_angles', NEURON, neurite_type=NeuriteType.all) assert len(local_bifangles) == 40 assert_allclose(local_bifangles, ref_local_bifangles) s = get_feature('local_bifurcation_angles', NEURON, neurite_type=NeuriteType.axon) assert len(s) == 10 s = get_feature('local_bifurcation_angles', NEURON, neurite_type=NeuriteType.basal_dendrite) assert len(s) == 20 s = get_feature('local_bifurcation_angles', NEURON, neurite_type=NeuriteType.apical_dendrite) assert len(s) == 10
def test_local_bifurcation_angles(): local_bif_angles = list(_nf.local_bifurcation_angles(SIMPLE)) assert_allclose(local_bif_angles, (pi, pi))