def test_any_radius_valid_for_axon(self):
for valid_radius in [-10, 0, 3, float('inf')]:
nodes = [
test_node(id=1, type=SOMA, radius=36, parent_node_id=-1),
test_node(id=2,
type=AXON,
radius=valid_radius,
parent_node_id=1)
]
errors = rv.validate_radius_threshold(
test_tree(nodes, strict_validation=False))
self.assertEqual(len(errors), 0)
def test_invalid_radius_for_dendrite(self):
for valid_radius in [20.002, 35, 40, 100, 1000]:
for dendrite in [BASAL_DENDRITE, APICAL_DENDRITE]:
nodes = [
test_node(id=1, type=SOMA, radius=36, parent_node_id=-1),
test_node(id=2,
type=dendrite,
radius=valid_radius,
parent_node_id=1)
]
errors = rv.validate_radius_threshold(
test_tree(nodes, strict_validation=False))
self.assertNodeErrors(errors, "The radius must be", [[2]])
def test_valid_radius_for_dendrite(self):
for valid_radius in [-1, 0, 10, 16, 19.999]:
for dendrite in [BASAL_DENDRITE, APICAL_DENDRITE]:
nodes = [
test_node(id=1, type=SOMA, radius=36, parent_node_id=-1),
test_node(id=2,
type=dendrite,
radius=valid_radius,
parent_node_id=1)
]
errors = rv.validate_radius_threshold(
test_tree(nodes, strict_validation=False))
self.assertEqual(len(errors), 0)
def test_invalid_radius_for_soma(self):
for invalid_radius in [-10, 0, 1, 34, 34.999]:
nodes = [test_node(type=SOMA, radius=invalid_radius)]
errors = rv.validate_radius_threshold(
test_tree(nodes, strict_validation=False))
self.assertNodeErrors(errors, "The radius must be", [[1]])
def test_valid_radius_for_soma(self):
for valid_radius in [35, 36, 100, 999]:
nodes = [test_node(type=SOMA, radius=valid_radius)]
errors = rv.validate_radius_threshold(
test_tree(nodes, strict_validation=False))
self.assertEqual(len(errors), 0)