def test_Overlay_outputs():
output_map = dict(out_file=dict(), )
outputs = Overlay.output_spec()
for key, metadata in output_map.items():
for metakey, value in metadata.items():
yield assert_equal, getattr(outputs.traits()[key], metakey), value
def test_Overlay_outputs():
output_map = dict(out_file=dict(),
)
outputs = Overlay.output_spec()
for key, metadata in output_map.items():
for metakey, value in metadata.items():
yield assert_equal, getattr(outputs.traits()[key], metakey), value
def test_Overlay_inputs():
input_map = dict(ignore_exception=dict(nohash=True,
usedefault=True,
),
stat_thresh=dict(position=7,
mandatory=True,
argstr='%.2f %.2f',
),
background_image=dict(position=4,
mandatory=True,
argstr='%s',
),
args=dict(argstr='%s',
),
show_negative_stats=dict(position=8,
xor=['stat_image2'],
argstr='%s',
),
stat_image2=dict(position=9,
xor=['show_negative_stats'],
argstr='%s',
),
bg_thresh=dict(mandatory=True,
position=5,
xor=('auto_thresh_bg', 'full_bg_range', 'bg_thresh'),
argstr='%.3f %.3f',
),
full_bg_range=dict(xor=('auto_thresh_bg', 'full_bg_range', 'bg_thresh'),
position=5,
mandatory=True,
argstr='-A',
),
auto_thresh_bg=dict(xor=('auto_thresh_bg', 'full_bg_range', 'bg_thresh'),
position=5,
mandatory=True,
argstr='-a',
),
use_checkerboard=dict(position=3,
argstr='-c',
),
terminal_output=dict(mandatory=True,
nohash=True,
),
environ=dict(nohash=True,
usedefault=True,
),
transparency=dict(position=1,
usedefault=True,
argstr='%s',
),
output_type=dict(),
out_type=dict(position=2,
usedefault=True,
argstr='%s',
),
stat_thresh2=dict(position=10,
argstr='%.2f %.2f',
),
stat_image=dict(position=6,
mandatory=True,
argstr='%s',
),
out_file=dict(hash_files=False,
genfile=True,
position=-1,
argstr='%s',
),
)
inputs = Overlay.input_spec()
for key, metadata in input_map.items():
for metakey, value in metadata.items():
yield assert_equal, getattr(inputs.traits()[key], metakey), value
def test_Overlay_inputs():
input_map = dict(
args=dict(argstr='%s', ),
auto_thresh_bg=dict(
argstr='-a',
mandatory=True,
position=5,
xor=('auto_thresh_bg', 'full_bg_range', 'bg_thresh'),
),
background_image=dict(
argstr='%s',
mandatory=True,
position=4,
),
bg_thresh=dict(
argstr='%.3f %.3f',
mandatory=True,
position=5,
xor=('auto_thresh_bg', 'full_bg_range', 'bg_thresh'),
),
environ=dict(
nohash=True,
usedefault=True,
),
full_bg_range=dict(
argstr='-A',
mandatory=True,
position=5,
xor=('auto_thresh_bg', 'full_bg_range', 'bg_thresh'),
),
ignore_exception=dict(
nohash=True,
usedefault=True,
),
out_file=dict(
argstr='%s',
genfile=True,
hash_files=False,
position=-1,
),
out_type=dict(
argstr='%s',
position=2,
usedefault=True,
),
output_type=dict(),
show_negative_stats=dict(
argstr='%s',
position=8,
xor=['stat_image2'],
),
stat_image=dict(
argstr='%s',
mandatory=True,
position=6,
),
stat_image2=dict(
argstr='%s',
position=9,
xor=['show_negative_stats'],
),
stat_thresh=dict(
argstr='%.2f %.2f',
mandatory=True,
position=7,
),
stat_thresh2=dict(
argstr='%.2f %.2f',
position=10,
),
terminal_output=dict(
mandatory=True,
nohash=True,
),
transparency=dict(
argstr='%s',
position=1,
usedefault=True,
),
use_checkerboard=dict(
argstr='-c',
position=3,
),
)
inputs = Overlay.input_spec()
for key, metadata in input_map.items():
for metakey, value in metadata.items():
yield assert_equal, getattr(inputs.traits()[key], metakey), value
