def run_model(self, train_config, eval_config):
with tf.Graph().as_default() as g:
train_model = base_model(params=train_config,
mode="train",
hvd=None)
train_model.compile()
eval_model = base_model(params=eval_config, mode="eval", hvd=None)
eval_model.compile(force_var_reuse=True)
train(train_model, eval_model)
saver = tf.train.Saver()
checkpoint = tf.train.latest_checkpoint(
train_model.params['logdir'])
with self.test_session(g, use_gpu=True) as sess:
saver.restore(sess, checkpoint)
sess.run([
train_model.get_data_layer(i).iterator.initializer
for i in range(train_model.num_gpus)
])
sess.run([
eval_model.get_data_layer(i).iterator.initializer
for i in range(eval_model.num_gpus)
])
weights = sess.run(tf.trainable_variables())
loss = sess.run(train_model.loss)
eval_losses = sess.run(eval_model.eval_losses)
eval_loss = np.mean(eval_losses)
weights_new = sess.run(tf.trainable_variables())
# checking that the weights has not changed from just computing the loss
for w, w_new in zip(weights, weights_new):
npt.assert_allclose(w, w_new)
eval_dict = evaluate(eval_model, checkpoint)
return loss, eval_loss, eval_dict
def run_model(self, train_config, eval_config):
with tf.Graph().as_default() as g:
train_model = base_model(params=train_config, mode="train", hvd=None)
train_model.compile()
eval_model = base_model(params=eval_config, mode="eval", hvd=None)
eval_model.compile(force_var_reuse=True)
train(train_model, eval_model)
saver = tf.train.Saver()
checkpoint = tf.train.latest_checkpoint(train_model.params['logdir'])
with self.test_session(g, use_gpu=True) as sess:
saver.restore(sess, checkpoint)
sess.run([train_model.get_data_layer(i).iterator.initializer
for i in range(train_model.num_gpus)])
sess.run([eval_model.get_data_layer(i).iterator.initializer
for i in range(eval_model.num_gpus)])
weights = sess.run(tf.trainable_variables())
loss = sess.run(train_model.loss)
eval_losses = sess.run(eval_model.eval_losses)
eval_loss = np.mean(eval_losses)
weights_new = sess.run(tf.trainable_variables())
# checking that the weights has not changed from just computing the loss
for w, w_new in zip(weights, weights_new):
npt.assert_allclose(w, w_new)
eval_dict = evaluate(eval_model, checkpoint)
return loss, eval_loss, eval_dict
def test_get_batches_for_epoch(self):
# this will take all gpu memory, but that's probably fine for tests
gpus = get_available_gpus()
length_list = []
for num_gpus in [1, 2, 3]:
if num_gpus > len(gpus):
continue
for bs in [1, 2, 3, 5, 7]:
if bs * num_gpus > 10:
continue
with tf.Graph().as_default() as g:
self.eval_config['batch_size_per_gpu'] = bs
self.eval_config['num_gpus'] = num_gpus
model = base_model(params=self.eval_config,
mode="eval",
hvd=None)
model.compile()
model.evaluate = lambda inputs, outputs: inputs
model.finalize_evaluation = lambda results: results
with self.test_session(g, use_gpu=True) as sess:
sess.run(tf.global_variables_initializer())
inputs_per_batch = get_results_for_epoch(
model, sess, False, "eval")
length_list.append(
np.hstack([
inp['source_tensors'][1]
for inp in inputs_per_batch
]))
for i in range(len(length_list) - 1):
npt.assert_allclose(length_list[i], length_list[i + 1])
def test_get_batches_for_epoch(self):
# this will take all gpu memory, but that's probably fine for tests
gpus = get_available_gpus()
length_list = []
for num_gpus in [1, 2, 3]:
if num_gpus > len(gpus):
continue
for bs in [1, 2, 3, 5, 7]:
if bs * num_gpus > 10:
continue
with tf.Graph().as_default() as g:
self.eval_config['batch_size_per_gpu'] = bs
self.eval_config['num_gpus'] = num_gpus
model = base_model(params=self.eval_config, mode="eval", hvd=None)
model.compile()
model.evaluate = lambda inputs, outputs: inputs
model.finalize_evaluation = lambda results: results
with self.test_session(g, use_gpu=True) as sess:
sess.run(tf.global_variables_initializer())
inputs_per_batch = get_results_for_epoch(model, sess, False, "eval")
length_list.append(np.hstack([inp['source_tensors'][1]
for inp in inputs_per_batch]))
for i in range(len(length_list) - 1):
npt.assert_allclose(length_list[i], length_list[i + 1])
def test_infer(self):
train_config, infer_config = self.prepare_config()
train_config['num_epochs'] = 200
infer_config['batch_size_per_gpu'] = 4
with tf.Graph().as_default() as g:
with self.test_session(g, use_gpu=True) as sess:
gpus = get_available_gpus()
if len(gpus) > 1:
infer_config['num_gpus'] = 2
else:
infer_config['num_gpus'] = 1
with tf.Graph().as_default():
train_model = base_model(params=train_config,
mode="train",
hvd=None)
train_model.compile()
train(train_model, None)
with tf.Graph().as_default():
infer_model = base_model(params=infer_config,
mode="infer",
hvd=None)
infer_model.compile()
print(train_model.params['logdir'])
output_file = os.path.join(train_model.params['logdir'],
'infer_out.csv')
infer(
infer_model,
tf.train.latest_checkpoint(train_model.params['logdir']),
output_file,
)
pred_csv = pd.read_csv(output_file)
true_csv = pd.read_csv(
'open_seq2seq/test_utils/toy_speech_data/toy_data.csv', )
for pred_row, true_row in zip(pred_csv.as_matrix(),
true_csv.as_matrix()):
# checking file name
self.assertEqual(pred_row[0], true_row[0])
# checking prediction
self.assertEqual(pred_row[-1], true_row[-1])
def test_mp_collection(self):
train_config, eval_config = self.prepare_config()
train_config['dtype'] = 'mixed'
with tf.Graph().as_default():
model = base_model(params=train_config, mode="train", hvd=None)
model.compile()
self.assertEqual(len(tf.trainable_variables()), 14)
self.assertEqual(
len(tf.get_collection('FP32_MASTER_COPIES')),
7, # minus batch norm beta and gamma and row_conv vars
)
def test_mp_collection(self):
train_config, eval_config = self.prepare_config()
train_config['dtype'] = 'mixed'
with tf.Graph().as_default():
model = base_model(params=train_config, mode="train", hvd=None)
model.compile()
self.assertEqual(len(tf.trainable_variables()), 14)
self.assertEqual(
len(tf.get_collection('FP32_MASTER_COPIES')),
7, # minus batch norm beta and gamma and row_conv vars
)
def test_infer(self):
train_config, infer_config = self.prepare_config()
train_config['num_epochs'] = 200
infer_config['batch_size_per_gpu'] = 4
with tf.Graph().as_default() as g:
with self.test_session(g, use_gpu=True) as sess:
gpus = get_available_gpus()
if len(gpus) > 1:
infer_config['num_gpus'] = 2
else:
infer_config['num_gpus'] = 1
with tf.Graph().as_default():
train_model = base_model(params=train_config, mode="train", hvd=None)
train_model.compile()
train(train_model, None)
with tf.Graph().as_default():
infer_model = base_model(params=infer_config, mode="infer", hvd=None)
infer_model.compile()
print(train_model.params['logdir'])
output_file = os.path.join(train_model.params['logdir'], 'infer_out.csv')
infer(
infer_model,
tf.train.latest_checkpoint(train_model.params['logdir']),
output_file,
)
pred_csv = pd.read_csv(output_file)
true_csv = pd.read_csv(
'open_seq2seq/test_utils/toy_speech_data/toy_data.csv',
)
for pred_row, true_row in zip(pred_csv.as_matrix(), true_csv.as_matrix()):
# checking file name
self.assertEqual(pred_row[0], true_row[0])
# checking prediction
self.assertEqual(pred_row[-1], true_row[-1])
def test_maybe_functions(self):
train_config, eval_config = self.prepare_config()
with tf.Graph().as_default():
model = base_model(params=train_config, mode="train", hvd=None)
model.compile()
model._gpu_ids = range(5)
model.params['batch_size_per_gpu'] = 2
char2idx = model.data_layer.params['char2idx']
inputs = [
['this is a great day', 'london is the capital of great britain'],
['ooo', 'lll'],
['a b c\' asdf', 'blah blah bblah'],
['this is great day', 'london capital gret britain'],
['aaaaaaaasdfdasdf', 'df d sdf asd fd f sdf df blah\' blah'],
]
outputs = [
['this is great a day', 'london capital gret britain'],
['ooo', 'lll'],
['aaaaaaaasdfdasdf', 'df d sdf asd fd f sdf df blah blah'],
['this is a great day', 'london is the capital of great britain'],
['a b c\' asdf', 'blah blah\' bblah'],
]
y = [None] * len(inputs)
len_y = [None] * len(inputs)
indices, values, dense_shape = [], [], []
num_gpus = len(inputs)
for gpu_id in range(num_gpus):
num_samples = len(inputs[gpu_id])
max_len = np.max(list(map(len, inputs[gpu_id])))
y[gpu_id] = np.zeros((num_samples, max_len), dtype=np.int)
len_y[gpu_id] = np.zeros(num_samples, dtype=np.int)
for sample_id in range(num_samples):
num_letters = len(inputs[gpu_id][sample_id])
len_y[gpu_id][sample_id] = num_letters
for letter_id in range(num_letters):
y[gpu_id][sample_id, letter_id] = char2idx[
inputs[gpu_id][sample_id][letter_id]]
num_gpus = len(outputs)
for gpu_id in range(num_gpus):
num_samples = len(outputs[gpu_id])
max_len = np.max(list(map(len, outputs[gpu_id])))
dense_shape.append(np.array((num_samples, max_len)))
values.append([])
indices.append([])
for sample_id in range(num_samples):
num_letters = len(outputs[gpu_id][sample_id])
for letter_id in range(num_letters):
values[gpu_id].append(
char2idx[outputs[gpu_id][sample_id][letter_id]])
indices[gpu_id].append(np.array([sample_id, letter_id]))
values[gpu_id] = np.array(values[gpu_id], dtype=np.int)
indices[gpu_id] = np.array(indices[gpu_id], dtype=np.int)
input_values = [None, None, y, len_y]
output_values = [
tf.SparseTensorValue(indices[i], values[i], dense_shape[i])
for i in range(num_gpus)
]
output_dict = model.maybe_evaluate([input_values, input_values],
[output_values, output_values])
w_lev = 0.0
w_len = 0.0
for batch_id in range(len(inputs)):
for sample_id in range(len(inputs[batch_id])):
input_sample = inputs[batch_id][sample_id]
output_sample = outputs[batch_id][sample_id]
w_lev += levenshtein(input_sample.split(),
output_sample.split())
w_len += len(input_sample.split())
self.assertEqual(output_dict['Eval WER'], w_lev / w_len)
self.assertEqual(output_dict['Eval WER'], 37 / 40.0)
output_dict = model.maybe_print_logs(input_values, output_values)
self.assertEqual(output_dict['Sample WER'], 0.4)
def test_maybe_functions(self):
train_config, eval_config = self.prepare_config()
with tf.Graph().as_default():
model = base_model(params=train_config, mode="train", hvd=None)
model.compile()
model._gpu_ids = range(5)
model.params['batch_size_per_gpu'] = 2
char2idx = model.get_data_layer().params['char2idx']
inputs = [
['this is a great day', 'london is the capital of great britain'],
['ooo', 'lll'],
['a b c\' asdf', 'blah blah bblah'],
['this is great day', 'london capital gret britain'],
['aaaaaaaasdfdasdf', 'df d sdf asd fd f sdf df blah\' blah'],
]
outputs = [
['this is great a day', 'london capital gret britain'],
['ooo', 'lll'],
['aaaaaaaasdfdasdf', 'df d sdf asd fd f sdf df blah blah'],
['this is a great day', 'london is the capital of great britain'],
['a b c\' asdf', 'blah blah\' bblah'],
]
y = [None] * len(inputs)
len_y = [None] * len(inputs)
indices, values, dense_shape = [], [], []
num_gpus = len(inputs)
for gpu_id in range(num_gpus):
num_samples = len(inputs[gpu_id])
max_len = np.max(list(map(len, inputs[gpu_id])))
y[gpu_id] = np.zeros((num_samples, max_len), dtype=np.int)
len_y[gpu_id] = np.zeros(num_samples, dtype=np.int)
for sample_id in range(num_samples):
num_letters = len(inputs[gpu_id][sample_id])
len_y[gpu_id][sample_id] = num_letters
for letter_id in range(num_letters):
y[gpu_id][sample_id, letter_id] = char2idx[
inputs[gpu_id][sample_id][letter_id]
]
num_gpus = len(outputs)
for gpu_id in range(num_gpus):
num_samples = len(outputs[gpu_id])
max_len = np.max(list(map(len, outputs[gpu_id])))
dense_shape.append(np.array((num_samples, max_len)))
values.append([])
indices.append([])
for sample_id in range(num_samples):
num_letters = len(outputs[gpu_id][sample_id])
for letter_id in range(num_letters):
values[gpu_id].append(
char2idx[outputs[gpu_id][sample_id][letter_id]]
)
indices[gpu_id].append(np.array([sample_id, letter_id]))
values[gpu_id] = np.array(values[gpu_id], dtype=np.int)
indices[gpu_id] = np.array(indices[gpu_id], dtype=np.int)
x = [np.empty(2)] * len(y)
len_x = [None] * len(y)
input_values = list(zip(x, len_x, y, len_y))
output_values = [
[tf.SparseTensorValue(indices[i], values[i], dense_shape[i])]
for i in range(num_gpus)
]
results = []
for inp, out in zip(input_values, output_values):
inp_dict = {'source_tensors': [inp[0], inp[1]],
'target_tensors': [inp[2], inp[3]]}
results.append(model.evaluate(inp_dict, out))
for inp, out in zip(input_values, output_values):
inp_dict = {'source_tensors': [inp[0], inp[1]],
'target_tensors': [inp[2], inp[3]]}
results.append(model.evaluate(inp_dict, out))
output_dict = model.finalize_evaluation(results)
w_lev = 0.0
w_len = 0.0
for batch_id in range(len(inputs)):
for sample_id in range(len(inputs[batch_id])):
input_sample = inputs[batch_id][sample_id]
output_sample = outputs[batch_id][sample_id]
w_lev += levenshtein(input_sample.split(), output_sample.split())
w_len += len(input_sample.split())
self.assertEqual(output_dict['Eval WER'], w_lev / w_len)
self.assertEqual(output_dict['Eval WER'], 37 / 40.0)
inp_dict = {'source_tensors': [input_values[0][0], input_values[0][1]],
'target_tensors': [input_values[0][2], input_values[0][3]]}
output_dict = model.maybe_print_logs(inp_dict, output_values[0])
self.assertEqual(output_dict['Sample WER'], 0.4)
