#!/usr/bin/env python
import os
from paramgrid import batchjob_args, jobqueue
parser = batchjob_args.argParser("Submit a single job to queue")
parser.add_argument('iniFile', nargs='+')
jobqueue.addArguments(parser)
args = parser.parse_args()
ini = [ini.replace('.ini', '') for ini in args.iniFile]
jobqueue.submitJob(os.path.basename(ini[0]), ini, msg=True, **args.__dict__)
#!/usr/bin/env python
import os
from paramgrid import batchjob_args, jobqueue
parser = batchjob_args.argParser("Submit a single job to queue")
parser.add_argument('iniFile', nargs='+')
jobqueue.addArguments(parser)
args = parser.parse_args()
ini = [ini.replace('.ini', '') for ini in args.iniFile]
jobqueue.submitJob(os.path.basename(ini[0]), ini, msg=True, **args.__dict__)
#!/usr/bin/env python
from __future__ import absolute_import
from __future__ import print_function
import hashlib
import os
from paramgrid import batchjob_args, jobqueue
Opts = batchjob_args.batchArgs(
'Submit jobs to run chains or importance sample',
notExist=True,
notall=True,
converge=True)
jobqueue.addArguments(Opts.parser, combinedJobs=True)
Opts.parser.add_argument('--subitems',
action='store_true',
help='include sub-grid items')
Opts.parser.add_argument('--not_queued', action='store_true')
Opts.parser.add_argument(
'--filters',
action='store_true',
help='run any python importance filters on grid (no submission)')
Opts.parser.add_argument('--minimize',
action='store_true',
help='Run minimization jobs')
Opts.parser.add_argument(
'--importance_minimize',
action='store_true',
help='Run minimization jobs for chains that are importance sampled')
#!/usr/bin/env python
from __future__ import absolute_import
from __future__ import print_function
import hashlib
import os
from paramgrid import batchjob_args, jobqueue
Opts = batchjob_args.batchArgs('Submit jobs to run chains or importance sample', notExist=True, notall=True,
converge=True)
jobqueue.addArguments(Opts.parser, combinedJobs=True)
Opts.parser.add_argument('--subitems', action='store_true', help='include sub-grid items')
Opts.parser.add_argument('--not_queued', action='store_true')
Opts.parser.add_argument('--filters', action='store_true',
help='run any python importance filters on grid (no submission)')
Opts.parser.add_argument('--minimize', action='store_true', help='Run minimization jobs')
Opts.parser.add_argument('--importance_minimize', action='store_true',
help='Run minimization jobs for chains that are importance sampled')
Opts.parser.add_argument('--minimize_failed', action='store_true', help='run where minimization previously failed')
Opts.parser.add_argument('--checkpoint_run', nargs='?', default=None, const=0, type=float,
help='run if stopped and not finished; if optional value given then only run chains with convergence worse than the given value')
Opts.parser.add_argument('--importance_ready', action='store_true', help='where parent chain has converged and stopped')
Opts.parser.add_argument('--importance_changed', action='store_true',
help='run importance jobs where the parent chain has changed since last run')
Opts.parser.add_argument('--parent_converge', type=float, default=0,
help='minimum R-1 convergence for importance job parent')
Opts.parser.add_argument('--parent_stopped', action='store_true', help='only run if parent chain is not still running')
Opts.parser.add_argument('--chain_exists', action='store_true', help='Only run if chains already exist')