def process_tb(self, tarballs):
"""Process Tarballs For Indexing and creates report
"tarballs" - List of tarball, it is the second value of
the tuple returned by collect_tb() """
res = 0
idxctx = self.idxctx
error_code = self.error_code
tb_deque = deque(sorted(tarballs))
# At this point, tarballs contains a list of tar balls sorted by size
# that were available as symlinks in the various 'linksrc' directories.
idxctx.logger.debug("Preparing to index {:d} tar balls", len(tb_deque))
try:
# Now that we are ready to begin the actual indexing step, ensure we
# have the proper index templates in place.
idxctx.logger.debug("update_templates [start]")
idxctx.templates.update_templates(idxctx.es)
except TemplateError as e:
res = self.emit_error(idxctx.logger.error,
"TEMPLATE_CREATION_ERROR", e)
except SigTermException:
# Re-raise a SIGTERM to avoid it being lumped in with general
# exception handling below.
raise
except Exception:
idxctx.logger.exception(
"update_templates [end]: Unexpected template"
" processing error")
res = error_code["GENERIC_ERROR"]
else:
idxctx.logger.debug("update_templates [end]")
res = error_code["OK"]
if not res.success:
# Exit early if we encounter any errors.
return res.value
report = Report(
idxctx.config,
self.name,
es=idxctx.es,
pid=idxctx.getpid(),
group_id=idxctx.getgid(),
user_id=idxctx.getuid(),
hostname=idxctx.gethostname(),
version=VERSION,
templates=idxctx.templates,
)
# We use the "start" report ID as the tracking ID for all indexed
# documents.
try:
tracking_id = report.post_status(tstos(idxctx.time()), "start")
except SigTermException:
# Re-raise a SIGTERM to avoid it being lumped in with general
# exception handling below.
raise
except Exception:
idxctx.logger.error("Failed to post initial report status")
return error_code["GENERIC_ERROR"].value
else:
idxctx.set_tracking_id(tracking_id)
with tempfile.TemporaryDirectory(prefix=f"{self.name}.",
dir=idxctx.config.TMP) as tmpdir:
idxctx.logger.debug("start processing list of tar balls")
tb_list = Path(tmpdir, f"{self.name}.{idxctx.TS}.list")
try:
with tb_list.open(mode="w") as lfp:
# Write out all the tar balls we are processing so external
# viewers can follow along from home.
for size, controller, tb in tarballs:
print(f"{size:20d} {controller} {tb}", file=lfp)
indexed = Path(tmpdir, f"{self.name}.{idxctx.TS}.indexed")
erred = Path(tmpdir, f"{self.name}.{idxctx.TS}.erred")
skipped = Path(tmpdir, f"{self.name}.{idxctx.TS}.skipped")
ie_filepath = Path(
tmpdir, f"{self.name}.{idxctx.TS}.indexing-errors.json")
# We use a list object here so that when we close over this
# variable in the handler, the list object will be closed over,
# but not its contents.
sigquit_interrupt = [False]
def sigquit_handler(*args):
sigquit_interrupt[0] = True
sighup_interrupt = [False]
def sighup_handler(*args):
sighup_interrupt[0] = True
signal.signal(signal.SIGQUIT, sigquit_handler)
signal.signal(signal.SIGHUP, sighup_handler)
count_processed_tb = 0
try:
while len(tb_deque) > 0:
size, controller, tb = tb_deque.popleft()
# Sanity check source tar ball path
linksrc_dir = Path(tb).parent
linksrc_dirname = linksrc_dir.name
count_processed_tb += 1
assert linksrc_dirname == self.linksrc, (
f"Logic bomb! tar ball "
f"path {tb} does not contain {self.linksrc}")
idxctx.logger.info("Starting {} (size {:d})", tb, size)
dataset = None
ptb = None
username = None
try:
path = os.path.realpath(tb)
try:
dataset = Dataset.attach(
path=path,
state=States.INDEXING,
)
except DatasetNotFound:
idxctx.logger.warn(
"Unable to locate Dataset {}",
path,
)
except DatasetTransitionError as e:
# TODO: This means the Dataset is known, but not in a
# state where we'd expect to be indexing it. So what do
# we do with it? (Note: this is where an audit log will
# be handy; i.e., how did we get here?) For now, just
# let it go.
idxctx.logger.warn(
"Unable to advance dataset state: {}",
str(e))
else:
username = dataset.owner
# "Open" the tar ball represented by the tar ball object
idxctx.logger.debug("open tar ball")
ptb = PbenchTarBall(
idxctx,
username,
path,
tmpdir,
Path(self.incoming, controller),
)
# Construct the generator for emitting all actions. The
# `idxctx` dictionary is passed along to each generator so
# that it can add its context for error handling to the
# list.
idxctx.logger.debug("generator setup")
if self.options.index_tool_data:
actions = ptb.mk_tool_data_actions()
else:
actions = ptb.make_all_actions()
# File name for containing all indexing errors that
# can't/won't be retried.
with ie_filepath.open(mode="w") as fp:
idxctx.logger.debug("begin indexing")
try:
signal.signal(signal.SIGINT,
sigint_handler)
es_res = es_index(
idxctx.es,
actions,
fp,
idxctx.logger,
idxctx._dbg,
)
except SigIntException:
idxctx.logger.exception(
"Indexing interrupted by SIGINT, continuing to next tarball"
)
continue
finally:
# Turn off the SIGINT handler when not indexing.
signal.signal(signal.SIGINT,
signal.SIG_IGN)
except UnsupportedTarballFormat as e:
tb_res = self.emit_error(idxctx.logger.warning,
"TB_META_ABSENT", e)
except BadDate as e:
tb_res = self.emit_error(idxctx.logger.warning,
"BAD_DATE", e)
except FileNotFoundError as e:
tb_res = self.emit_error(idxctx.logger.warning,
"FILE_NOT_FOUND_ERROR", e)
except BadMDLogFormat as e:
tb_res = self.emit_error(idxctx.logger.warning,
"BAD_METADATA", e)
except SigTermException:
idxctx.logger.exception(
"Indexing interrupted by SIGTERM, terminating")
break
except Exception as e:
tb_res = self.emit_error(idxctx.logger.exception,
"GENERIC_ERROR", e)
else:
beg, end, successes, duplicates, failures, retries = es_res
idxctx.logger.info(
"done indexing (start ts: {}, end ts: {}, duration:"
" {:.2f}s, successes: {:d}, duplicates: {:d},"
" failures: {:d}, retries: {:d})",
tstos(beg),
tstos(end),
end - beg,
successes,
duplicates,
failures,
retries,
)
tb_res = error_code[
"OP_ERROR" if failures > 0 else "OK"]
finally:
if dataset:
try:
dataset.advance(
States.INDEXED if tb_res.
success else States.QUARANTINED)
Metadata.remove(dataset, Metadata.REINDEX)
except DatasetTransitionError:
idxctx.logger.exception(
"Dataset state error")
try:
ie_len = ie_filepath.stat().st_size
except FileNotFoundError:
# Above operation never made it to actual indexing, ignore.
pass
except SigTermException:
# Re-raise a SIGTERM to avoid it being lumped in with
# general exception handling below.
raise
except Exception:
idxctx.logger.exception(
"Unexpected error handling"
" indexing errors file: {}",
ie_filepath,
)
else:
# Success fetching indexing error file size.
if ie_len > len(tb) + 1:
try:
report.post_status(tstos(end), "errors",
ie_filepath)
except Exception:
idxctx.logger.exception(
"Unexpected error issuing"
" report status with errors: {}",
ie_filepath,
)
finally:
# Unconditionally remove the indexing errors file.
try:
os.remove(ie_filepath)
except SigTermException:
# Re-raise a SIGTERM to avoid it being lumped in with
# general exception handling below.
raise
except Exception:
pass
# Distinguish failure cases, so we can retry the indexing
# easily if possible. Different `linkerrdest` directories for
# different failures; the rest are going to end up in
# `linkerrdest` for later retry.
controller_path = linksrc_dir.parent
if tb_res is error_code["OK"]:
idxctx.logger.info(
"{}: {}/{}: success",
idxctx.TS,
controller_path.name,
os.path.basename(tb),
)
# Success
with indexed.open(mode="a") as fp:
print(tb, file=fp)
rename_tb_link(
tb, Path(controller_path, self.linkdest),
idxctx.logger)
elif tb_res is error_code["OP_ERROR"]:
idxctx.logger.warning(
"{}: index failures encountered on {}",
idxctx.TS, tb)
with erred.open(mode="a") as fp:
print(tb, file=fp)
rename_tb_link(
tb,
Path(controller_path, f"{self.linkerrdest}.1"),
idxctx.logger,
)
elif tb_res in (error_code["CFG_ERROR"],
error_code["BAD_CFG"]):
assert False, (
f"Logic Bomb! Unexpected tar ball handling "
f"result status {tb_res.value:d} for tar ball {tb}"
)
elif tb_res.tarball_error:
# # Quietly skip these errors
with skipped.open(mode="a") as fp:
print(tb, file=fp)
rename_tb_link(
tb,
Path(
controller_path,
f"{self.linkerrdest}.{tb_res.value:d}",
),
idxctx.logger,
)
else:
idxctx.logger.error(
"{}: index error {:d} encountered on {}",
idxctx.TS,
tb_res.value,
tb,
)
with erred.open(mode="a") as fp:
print(tb, file=fp)
rename_tb_link(
tb,
Path(controller_path, self.linkerrdest),
idxctx.logger,
)
idxctx.logger.info(
"Finished{} {} (size {:d})",
"[SIGQUIT]" if sigquit_interrupt[0] else "",
tb,
size,
)
if sigquit_interrupt[0]:
break
if sighup_interrupt[0]:
status, new_tb = self.collect_tb()
if status == 0:
if not set(new_tb).issuperset(tb_deque):
idxctx.logger.info(
"Tarballs supposed to be in 'TO-INDEX' are no longer present",
set(tb_deque).difference(new_tb),
)
tb_deque = deque(sorted(new_tb))
idxctx.logger.info(
"SIGHUP status (Current tar ball indexed: ({}), Remaining: {}, Completed: {}, Errors_encountered: {}, Status: {})",
Path(tb).name,
len(tb_deque),
count_processed_tb,
_count_lines(erred),
tb_res,
)
sighup_interrupt[0] = False
continue
except SigTermException:
idxctx.logger.exception(
"Indexing interrupted by SIGQUIT, stop processing tarballs"
)
finally:
# Turn off the SIGQUIT and SIGHUP handler when not indexing.
signal.signal(signal.SIGQUIT, signal.SIG_IGN)
signal.signal(signal.SIGHUP, signal.SIG_IGN)
except SigTermException:
# Re-raise a SIGTERM to avoid it being lumped in with general
# exception handling below.
raise
except Exception:
idxctx.logger.exception(error_code["GENERIC_ERROR"].message)
res = error_code["GENERIC_ERROR"]
else:
# No exceptions while processing tar ball, success.
res = error_code["OK"]
finally:
if idxctx:
idxctx.dump_opctx()
idxctx.logger.debug("stopped processing list of tar balls")
idx = _count_lines(indexed)
skp = _count_lines(skipped)
err = _count_lines(erred)
idxctx.logger.info(
"{}.{}: indexed {:d} (skipped {:d}) results,"
" {:d} errors",
self.name,
idxctx.TS,
idx,
skp,
err,
)
if err > 0:
if skp > 0:
subj = (
f"{self.name}.{idxctx.TS} - Indexed {idx:d} results, skipped {skp:d}"
f" results, w/ {err:d} errors")
else:
subj = (
f"{self.name}.{idxctx.TS} - Indexed {idx:d} results, w/ {err:d}"
" errors")
else:
if skp > 0:
subj = f"{self.name}.{idxctx.TS} - Indexed {idx:d} results, skipped {skp:d} results"
else:
subj = f"{self.name}.{idxctx.TS} - Indexed {idx:d} results"
report_fname = Path(tmpdir, f"{self.name}.{idxctx.TS}.report")
with report_fname.open(mode="w") as fp:
print(subj, file=fp)
if idx > 0:
print("\nIndexed Results\n===============", file=fp)
with indexed.open() as ifp:
for line in sorted(ifp):
print(line.strip(), file=fp)
if err > 0:
print(
"\nResults producing errors"
"\n========================",
file=fp,
)
with erred.open() as efp:
for line in sorted(efp):
print(line.strip(), file=fp)
if skp > 0:
print("\nSkipped Results\n===============", file=fp)
with skipped.open() as sfp:
for line in sorted(sfp):
print(line.strip(), file=fp)
try:
report.post_status(tstos(idxctx.time()), "status",
report_fname)
except SigTermException:
# Re-raise a SIGTERM to avoid it being lumped in with general
# exception handling below.
raise
except Exception:
pass
return res.value
def main(options, name):
"""Main entry point to pbench-index.
The caller is required to pass the "options" argument with the following
expected attributes:
cfg_name - Name of the configuration file to use
dump_index_patterns - Don't do any indexing, but just emit the
list of index patterns that would be used
dump_templates - Dump the templates that would be used
index_tool_data - Index tool data only
re_index - Consider tar balls marked for re-indexing
All exceptions are caught and logged to syslog with the stacktrace of
the exception in a sub-object of the logged JSON document.
Status codes used by es_index and the error below are defined from the
list below to maintain compatibility with the previous code base when
pbench-index was a bash script and invoked index-pbench (yes, a bit
confusing), the predecessor to this program. The codes were used to
sort the errors we encountered processing tar balls in to categories
of retry or not:
0 - normal, successful exit, no errors
1 - Operational error while indexing
2 - Configuration file not specified
3 - Bad configuration file
4 - Tar ball does not contain a metadata.log file
5 - Bad start run date value encountered
6 - File Not Found error
7 - Bad metadata.log file encountered
8 - Error reading a mapping file for Elasticsearch templates
9 - Error creating one of the Elasticsearch templates
10 - Bad hostname in a sosreport
11 - Failure unpacking the tar ball
12 - generic error, needs to be investigated and can be retried
after any indexing bugs are fixed.
Return Values (now a sub-set of the original status codes above):
0 - Successfully processed all tar balls (errors processing tar
balls are reported in the logs and in index status reports)
1 - Failed to process one or more tar balls for unknown reasons
(see logs)
2 - Missing configuration file
3 - Invalid configuration file
8 - Unable to load and process expected mapping files
9 - Unable to update index templates in configured Elasticsearch
instance
Signal Handlers used to establish different patterns for the three
behaviors:
1. Gracefully stop processing tar balls
- SIGQUIT
- The current tar ball is indexed until completion, but no other
tar balls are processed.
- Handler Behavior:
- Sets a flag that causes the code flow to break out of the
for loop.
- Does not raise an exception.
2. Interrupt the current tar ball being indexed, and proceed to the
next one, if any
- SIGINT
- Handler Behavior:
- try/except/finally placed immediately around the es_index()
call so that the signal handler will only be established for
the duration of the call.
- Raises an exception caught by above try/except/finally.
- The finally clause would take down the signal handler.
3. Stop processing tar balls immediately and exit gracefully
- SIGTERM
- Handler Behavior:
- Raises an exception caught be a new, outer-most, try/except
block that does not have a finally clause (as you don't want
any code execution in the finally block).
"""
_name_suf = "-tool-data" if options.index_tool_data else ""
_name_re = "-re" if options.re_index else ""
name = f"{name}{_name_re}{_name_suf}"
if not options.cfg_name:
print(
f"{name}: ERROR: No config file specified; set"
" _PBENCH_SERVER_CONFIG env variable or"
" use --config <file> on the command line",
file=sys.stderr,
)
return 2
idxctx = None
try:
idxctx = IdxContext(options, name, _dbg=_DEBUG)
except (ConfigFileError, ConfigParserError) as e:
print(f"{name}: {e}", file=sys.stderr)
return 2
except BadConfig as e:
print(f"{name}: {e}", file=sys.stderr)
return 3
except JsonFileError as e:
print(f"{name}: {e}", file=sys.stderr)
return 8
if options.dump_index_patterns:
idxctx.templates.dump_idx_patterns()
return 0
if options.dump_templates:
idxctx.templates.dump_templates()
return 0
_re_idx = "RE-" if options.re_index else ""
if options.index_tool_data:
# The link source and destination for the operation of this script
# when it only indexes tool data.
linksrc = "TO-INDEX-TOOL"
linkdest = "INDEXED"
else:
# The link source and destination for the operation of this script
# when it indexes run, table-of-contents, and result data.
linksrc = f"TO-{_re_idx}INDEX"
linkdest = "TO-INDEX-TOOL"
# We only ever use a symlink'd error destination for indexing
# problems.
linkerrdest = "WONT-INDEX"
res = 0
ARCHIVE_rp = idxctx.config.ARCHIVE
INCOMING_rp = idxctx.config.INCOMING
INCOMING_path = idxctx.config.get_valid_dir_option("INCOMING", INCOMING_rp,
idxctx.logger)
if not INCOMING_path:
res = 3
qdir = idxctx.config.get_conf("QUARANTINE", "pbench-server",
"pbench-quarantine-dir", idxctx.logger)
if not qdir:
res = 3
else:
qdir_path = idxctx.config.get_valid_dir_option("QDIR", Path(qdir),
idxctx.logger)
if not qdir_path:
res = 3
if res != 0:
# Exit early if we encounter any errors.
return res
idxctx.logger.debug("{}.{}: starting", name, idxctx.TS)
# find -L $ARCHIVE/*/$linksrc -name '*.tar.xz' -printf "%s\t%p\n" 2>/dev/null | sort -n > $list
tarballs = []
try:
tb_glob = os.path.join(ARCHIVE_rp, "*", linksrc, "*.tar.xz")
for tb in glob.iglob(tb_glob):
try:
rp = Path(tb).resolve(strict=True)
except OSError:
idxctx.logger.warning("{} does not resolve to a real path", tb)
quarantine(qdir, idxctx.logger, tb)
continue
controller_path = rp.parent
controller = controller_path.name
archive_path = controller_path.parent
if str(archive_path) != str(ARCHIVE_rp):
idxctx.logger.warning(
"For tar ball {}, original home is not {}", tb, ARCHIVE_rp)
quarantine(qdir, idxctx.logger, tb)
continue
if not Path(f"{rp}.md5").is_file():
idxctx.logger.warning("Missing .md5 file for {}", tb)
quarantine(qdir, idxctx.logger, tb)
# Audit should pick up missing .md5 file in ARCHIVE directory.
continue
try:
# get size
size = rp.stat().st_size
except OSError:
idxctx.logger.warning("Could not fetch tar ball size for {}",
tb)
quarantine(qdir, idxctx.logger, tb)
# Audit should pick up missing .md5 file in ARCHIVE directory.
continue
else:
tarballs.append((size, controller, tb))
except SigTermException:
# Re-raise a SIGTERM to avoid it being lumped in with general
# exception handling below.
raise
except Exception:
idxctx.logger.exception("Unexpected error encountered generating list"
" of tar balls to process")
return 12
else:
if not tarballs:
idxctx.logger.info("No tar balls found that need processing")
return 0
# We always process the smallest tar balls first.
tarballs = sorted(tarballs)
# At this point, tarballs contains a list of tar balls sorted by size
# that were available as symlinks in the various 'linksrc' directories.
idxctx.logger.debug("Preparing to index {:d} tar balls", len(tarballs))
try:
# Now that we are ready to begin the actual indexing step, ensure we
# have the proper index templates in place.
idxctx.logger.debug("update_templates [start]")
idxctx.templates.update_templates(idxctx.es)
except TemplateError as e:
idxctx.logger.error("update_templates [end], error {}", repr(e))
res = 9
except SigTermException:
# Re-raise a SIGTERM to avoid it being lumped in with general
# exception handling below.
raise
except Exception:
idxctx.logger.exception("update_templates [end]: Unexpected template"
" processing error")
res = 12
else:
idxctx.logger.debug("update_templates [end]")
res = 0
if res != 0:
# Exit early if we encounter any errors.
return res
report = Report(
idxctx.config,
name,
es=idxctx.es,
pid=idxctx.getpid(),
group_id=idxctx.getgid(),
user_id=idxctx.getuid(),
hostname=idxctx.gethostname(),
version=VERSION,
templates=idxctx.templates,
)
# We use the "start" report ID as the tracking ID for all indexed
# documents.
try:
tracking_id = report.post_status(tstos(idxctx.time()), "start")
except SigTermException:
# Re-raise a SIGTERM to avoid it being lumped in with general
# exception handling below.
raise
except Exception:
idxctx.logger.error("Failed to post initial report status")
return 12
else:
idxctx.set_tracking_id(tracking_id)
with tempfile.TemporaryDirectory(prefix=f"{name}.",
dir=idxctx.config.TMP) as tmpdir:
idxctx.logger.debug("start processing list of tar balls")
tb_list = Path(tmpdir, f"{name}.{idxctx.TS}.list")
try:
with tb_list.open(mode="w") as lfp:
# Write out all the tar balls we are processing so external
# viewers can follow along from home.
for size, controller, tb in tarballs:
print(f"{size:20d} {controller} {tb}", file=lfp)
indexed = Path(tmpdir, f"{name}.{idxctx.TS}.indexed")
erred = Path(tmpdir, f"{name}.{idxctx.TS}.erred")
skipped = Path(tmpdir, f"{name}.{idxctx.TS}.skipped")
ie_filepath = Path(tmpdir,
f"{name}.{idxctx.TS}.indexing-errors.json")
# We use a list object here so that when we close over this
# variable in the handler, the list object will be closed over,
# but not its contents.
sigquit_interrupt = [False]
def sigquit_handler(*args):
sigquit_interrupt[0] = True
signal.signal(signal.SIGQUIT, sigquit_handler)
for size, controller, tb in tarballs:
# Sanity check source tar ball path
linksrc_dir = Path(tb).parent
linksrc_dirname = linksrc_dir.name
assert linksrc_dirname == linksrc, (
f"Logic bomb! tar ball "
f"path {tb} does not contain {linksrc}")
idxctx.logger.info("Starting {} (size {:d})", tb, size)
ptb = None
try:
# "Open" the tar ball represented by the tar ball object
idxctx.logger.debug("open tar ball")
ptb = PbenchTarBall(
idxctx,
os.path.realpath(tb),
tmpdir,
Path(INCOMING_rp, controller),
)
# Construct the generator for emitting all actions. The
# `idxctx` dictionary is passed along to each generator so
# that it can add its context for error handling to the
# list.
idxctx.logger.debug("generator setup")
if options.index_tool_data:
actions = ptb.mk_tool_data_actions()
else:
actions = ptb.make_all_actions()
# File name for containing all indexing errors that
# can't/won't be retried.
with ie_filepath.open(mode="w") as fp:
idxctx.logger.debug("begin indexing")
try:
signal.signal(signal.SIGINT, sigint_handler)
es_res = es_index(idxctx.es, actions, fp,
idxctx.logger, idxctx._dbg)
except SigIntException:
idxctx.logger.exception(
"Indexing interrupted by SIGINT, continuing to next tarball"
)
continue
finally:
# Turn off the SIGINT handler when not indexing.
signal.signal(signal.SIGINT, signal.SIG_IGN)
except UnsupportedTarballFormat as e:
idxctx.logger.warning("Unsupported tar ball format: {}", e)
tb_res = 4
except BadDate as e:
idxctx.logger.warning("Bad Date: {!r}", e)
tb_res = 5
except _filenotfounderror as e:
idxctx.logger.warning("No such file: {}", e)
tb_res = 6
except BadMDLogFormat as e:
idxctx.logger.warning(
"The metadata.log file is curdled in"
" tar ball: {}", e)
tb_res = 7
except SosreportHostname as e:
idxctx.logger.warning("Bad hostname in sosreport: {}", e)
tb_res = 10
except tarfile.TarError as e:
idxctx.logger.error("Can't unpack tar ball into {}: {}",
ptb.extracted_root, e)
tb_res = 11
except SigTermException:
idxctx.logger.exception(
"Indexing interrupted by SIGTERM, terminating")
break
except Exception as e:
idxctx.logger.exception("Other indexing error: {}", e)
tb_res = 12
else:
beg, end, successes, duplicates, failures, retries = es_res
idxctx.logger.info(
"done indexing (start ts: {}, end ts: {}, duration:"
" {:.2f}s, successes: {:d}, duplicates: {:d},"
" failures: {:d}, retries: {:d})",
tstos(beg),
tstos(end),
end - beg,
successes,
duplicates,
failures,
retries,
)
tb_res = 1 if failures > 0 else 0
try:
ie_len = ie_filepath.stat().st_size
except _filenotfounderror:
# Above operation never made it to actual indexing, ignore.
pass
except SigTermException:
# Re-raise a SIGTERM to avoid it being lumped in with
# general exception handling below.
raise
except Exception:
idxctx.logger.exception(
"Unexpected error handling"
" indexing errors file: {}",
ie_filepath,
)
else:
# Success fetching indexing error file size.
if ie_len > len(tb) + 1:
try:
report.post_status(tstos(end), "errors",
ie_filepath)
except Exception:
idxctx.logger.exception(
"Unexpected error issuing"
" report status with errors: {}",
ie_filepath,
)
finally:
# Unconditionally remove the indexing errors file.
try:
os.remove(ie_filepath)
except SigTermException:
# Re-raise a SIGTERM to avoid it being lumped in with
# general exception handling below.
raise
except Exception:
pass
# Distinguish failure cases, so we can retry the indexing
# easily if possible. Different `linkerrdest` directories for
# different failures; the rest are going to end up in
# `linkerrdest` for later retry.
controller_path = linksrc_dir.parent
if tb_res == 0:
idxctx.logger.info(
"{}: {}/{}: success",
idxctx.TS,
controller_path.name,
os.path.basename(tb),
)
# Success
with indexed.open(mode="a") as fp:
print(tb, file=fp)
rename_tb_link(tb, Path(controller_path, linkdest),
idxctx.logger)
elif tb_res == 1:
idxctx.logger.warning(
"{}: index failures encountered on {}", idxctx.TS, tb)
with erred.open(mode="a") as fp:
print(tb, file=fp)
rename_tb_link(
tb,
Path(controller_path, f"{linkerrdest}.1"),
idxctx.logger,
)
elif tb_res in (2, 3):
assert False, (
f"Logic Bomb! Unexpected tar ball handling "
f"result status {tb_res:d} for tar ball {tb}")
elif tb_res >= 4 or res <= 11:
# # Quietly skip these errors
with skipped.open(mode="a") as fp:
print(tb, file=fp)
rename_tb_link(
tb,
Path(controller_path, f"{linkerrdest}.{tb_res:d}"),
idxctx.logger,
)
else:
idxctx.logger.error(
"{}: index error {:d} encountered on {}", idxctx.TS,
tb_res, tb)
with erred.open(mode="a") as fp:
print(tb, file=fp)
rename_tb_link(tb, Path(controller_path, linkerrdest),
idxctx.logger)
idxctx.logger.info(
"Finished{} {} (size {:d})",
"[SIGQUIT]" if sigquit_interrupt[0] else "",
tb,
size,
)
if sigquit_interrupt[0]:
break
except SigTermException:
# Re-raise a SIGTERM to avoid it being lumped in with general
# exception handling below.
raise
except Exception:
idxctx.logger.exception("Unexpected setup error")
res = 12
else:
# No exceptions while processing tar ball, success.
res = 0
finally:
if idxctx:
idxctx.dump_opctx()
idxctx.logger.debug("stopped processing list of tar balls")
idx = _count_lines(indexed)
skp = _count_lines(skipped)
err = _count_lines(erred)
idxctx.logger.info(
"{}.{}: indexed {:d} (skipped {:d}) results,"
" {:d} errors",
name,
idxctx.TS,
idx,
skp,
err,
)
if err > 0:
if skp > 0:
subj = (
f"{name}.{idxctx.TS} - Indexed {idx:d} results, skipped {skp:d}"
f" results, w/ {err:d} errors")
else:
subj = (
f"{name}.{idxctx.TS} - Indexed {idx:d} results, w/ {err:d}"
" errors")
else:
if skp > 0:
subj = f"{name}.{idxctx.TS} - Indexed {idx:d} results, skipped {skp:d} results"
else:
subj = f"{name}.{idxctx.TS} - Indexed {idx:d} results"
report_fname = Path(tmpdir, f"{name}.{idxctx.TS}.report")
with report_fname.open(mode="w") as fp:
print(subj, file=fp)
if idx > 0:
print("\nIndexed Results\n===============", file=fp)
with indexed.open() as ifp:
for line in sorted(ifp):
print(line.strip(), file=fp)
if err > 0:
print(
"\nResults producing errors"
"\n========================",
file=fp,
)
with erred.open() as efp:
for line in sorted(efp):
print(line.strip(), file=fp)
if skp > 0:
print("\nSkipped Results\n===============", file=fp)
with skipped.open() as sfp:
for line in sorted(sfp):
print(line.strip(), file=fp)
try:
report.post_status(tstos(idxctx.time()), "status",
report_fname)
except SigTermException:
# Re-raise a SIGTERM to avoid it being lumped in with general
# exception handling below.
raise
except Exception:
pass
return res
def backup_data(lb_obj, s3_obj, config, logger):
qdir = config.QDIR
tarlist = glob.iglob(
os.path.join(config.ARCHIVE, "*", _linksrc, "*.tar.xz"))
ntotal = nbackup_success = nbackup_fail = ns3_success = ns3_fail = nquaran = 0
for tb in sorted(tarlist):
ntotal += 1
# resolve the link
try:
tar = Path(tb).resolve(strict=True)
except FileNotFoundError:
logger.error(
"Tarball link, '{}', does not resolve to a real location", tb)
logger.debug("Start backup of {}.", tar)
# check tarball exist and it is a regular file
if tar.exists() and tar.is_file():
pass
else:
# tarball does not exist or it is not a regular file
quarantine(qdir, logger, tb)
nquaran += 1
logger.error(
"Quarantine: {}, {} does not exist or it is not a regular file",
tb,
tar,
)
continue
archive_md5 = Path(f"{tar}.md5")
# check that the md5 file exists and it is a regular file
if archive_md5.exists() and archive_md5.is_file():
pass
else:
# md5 file does not exist or it is not a regular file
quarantine(qdir, logger, tb)
nquaran += 1
logger.error(
"Quarantine: {}, {} does not exist or it is not a regular file",
tb,
archive_md5,
)
continue
# read the md5sum from md5 file
try:
with archive_md5.open() as f:
archive_md5_hex_value = f.readline().split(" ")[0]
except Exception:
# Could not read file.
quarantine(qdir, logger, tb)
nquaran += 1
logger.exception("Quarantine: {}, Could not read {}", tb,
archive_md5)
continue
# match md5sum of the tarball to its md5 file
try:
(_, archive_tar_hex_value) = md5sum(tar)
except Exception:
# Could not read file.
quarantine(qdir, logger, tb)
nquaran += 1
logger.exception("Quarantine: {}, Could not read {}", tb, tar)
continue
if archive_tar_hex_value != archive_md5_hex_value:
quarantine(qdir, logger, tb)
nquaran += 1
logger.error(
"Quarantine: {}, md5sum of {} does not match with its md5 file {}",
tb,
tar,
archive_md5,
)
continue
resultname = tar.name
controller_path = tar.parent
controller = controller_path.name
try:
# This tool can't see a dataset until it's been prepared either
# by server PUT or by pbench-server-prep-shim-002.py; in either
# case, the Dataset object must already exist.
dataset = Dataset.attach(controller=controller, path=resultname)
except DatasetError as e:
logger.warning("Trouble tracking {}:{}: {}", controller,
resultname, str(e))
dataset = None
# This will handle all the local backup related
# operations and count the number of successes and failures.
local_backup_result = backup_to_local(
lb_obj,
logger,
controller_path,
controller,
tb,
tar,
resultname,
archive_md5,
archive_md5_hex_value,
)
if local_backup_result == Status.SUCCESS:
nbackup_success += 1
elif local_backup_result == Status.FAIL:
nbackup_fail += 1
else:
assert (
False
), f"Impossible situation, local_backup_result = {local_backup_result!r}"
# This will handle all the S3 bucket related operations
# and count the number of successes and failures.
s3_backup_result = backup_to_s3(
s3_obj,
logger,
controller_path,
controller,
tb,
tar,
resultname,
archive_md5_hex_value,
)
if s3_backup_result == Status.SUCCESS:
ns3_success += 1
elif s3_backup_result == Status.FAIL:
ns3_fail += 1
else:
assert (
False
), f"Impossible situation, s3_backup_result = {s3_backup_result!r}"
if local_backup_result == Status.SUCCESS and (
s3_obj is None or s3_backup_result == Status.SUCCESS):
# Move tar ball symlink to its final resting place
rename_tb_link(tb, Path(controller_path, _linkdest), logger)
else:
# Do nothing when the backup fails, allowing us to retry on a
# future pass.
pass
if dataset:
Metadata.create(dataset=dataset,
key=Metadata.ARCHIVED,
value="True")
logger.debug("End backup of {}.", tar)
return Results(
ntotal=ntotal,
nbackup_success=nbackup_success,
nbackup_fail=nbackup_fail,
ns3_success=ns3_success,
ns3_fail=ns3_fail,
nquaran=nquaran,
)
def backup_data(lb_obj, s3_obj, config, logger):
qdir = config.QDIR
tarlist = glob.iglob(
os.path.join(config.ARCHIVE, "*", _linksrc, "*.tar.xz"))
ntotal = nbackup_success = nbackup_fail = ns3_success = ns3_fail = nquaran = 0
for tb in sorted(tarlist):
ntotal += 1
# resolve the link
tar = os.path.realpath(tb)
logger.debug("Start backup of {}.", tar)
# check tarball exist and it is a regular file
if os.path.exists(tar) and os.path.isfile(tar):
pass
else:
# tarball does not exist or it is not a regular file
quarantine(qdir, logger, tb)
nquaran += 1
logger.error(
"Quarantine: {}, {} does not exist or it is not a regular file",
tb, tar)
continue
archive_md5 = f"{tar}.md5"
# check md5 file exist and it is a regular file
if os.path.exists(archive_md5) and os.path.isfile(archive_md5):
pass
else:
# md5 file does not exist or it is not a regular file
quarantine(qdir, logger, tb)
nquaran += 1
logger.error(
"Quarantine: {}, {} does not exist or it is not a regular file",
tb,
archive_md5,
)
continue
# read the md5sum from md5 file
try:
with open(archive_md5) as f:
archive_md5_hex_value = f.readline().split(" ")[0]
except Exception:
# Could not read file.
quarantine(qdir, logger, tb)
nquaran += 1
logger.exception("Quarantine: {}, Could not read {}", tb,
archive_md5)
continue
# match md5sum of the tarball to its md5 file
try:
archive_tar_hex_value = md5sum(tar)
except Exception:
# Could not read file.
quarantine(qdir, logger, tb)
nquaran += 1
logger.exception("Quarantine: {}, Could not read {}", tb, tar)
continue
if archive_tar_hex_value != archive_md5_hex_value:
quarantine(qdir, logger, tb)
nquaran += 1
logger.error(
"Quarantine: {}, md5sum of {} does not match with its md5 file {}",
tb,
tar,
archive_md5,
)
continue
resultname = os.path.basename(tar)
controller_path = os.path.dirname(tar)
controller = os.path.basename(controller_path)
# This will handle all the local backup related
# operations and count the number of successes and failures.
local_backup_result = backup_to_local(
lb_obj,
logger,
controller_path,
controller,
tb,
tar,
resultname,
archive_md5,
archive_md5_hex_value,
)
if local_backup_result == Status.SUCCESS:
nbackup_success += 1
elif local_backup_result == Status.FAIL:
nbackup_fail += 1
else:
assert (
False
), f"Impossible situation, local_backup_result = {local_backup_result!r}"
# This will handle all the S3 bucket related operations
# and count the number of successes and failures.
s3_backup_result = backup_to_s3(
s3_obj,
logger,
controller_path,
controller,
tb,
tar,
resultname,
archive_md5_hex_value,
)
if s3_backup_result == Status.SUCCESS:
ns3_success += 1
elif s3_backup_result == Status.FAIL:
ns3_fail += 1
else:
assert (
False
), f"Impossible situation, s3_backup_result = {s3_backup_result!r}"
if local_backup_result == Status.SUCCESS and (
s3_obj is None or s3_backup_result == Status.SUCCESS):
# Move tar ball symlink to its final resting place
rename_tb_link(tb, os.path.join(controller_path, _linkdest),
logger)
else:
# Do nothing when the backup fails, allowing us to retry on a
# future pass.
pass
logger.debug("End backup of {}.", tar)
return Results(
ntotal=ntotal,
nbackup_success=nbackup_success,
nbackup_fail=nbackup_fail,
ns3_success=ns3_success,
ns3_fail=ns3_fail,
nquaran=nquaran,
)