def dynamic(self):
logger.info("Step 4: Monte Carlo simulation")
# draw a random value (uniform for the entire map)
z = pcr.mapnormal()
#~ self.report(z,"z")
# constraints, in order to make sure that random values are in the table of "lookup_table_average_thickness"
z = pcr.max(-5.0, z)
z = pcr.min(5.0, z)
# assign average thickness (also uniform for the entire map) based on z
self.Davg = pcr.lookupscalar(self.lookup_table_average_thickness, z)
#
self.report(self.Davg, "davg")
self.lnDavg = pcr.ln(self.Davg)
# sedimentary basin thickness (varying over cells and samples)
lnD = self.F * (self.lnCV * self.lnDavg) + self.lnDavg
# set the minimum depth (must be bigger than zero)
minimum_depth = 0.005
lnD = pcr.max(pcr.ln(minimum_depth), lnD)
# extrapolation
lnD = pcr.cover(lnD, \
pcr.windowaverage(lnD, 1.50*vos.getMapAttributes(self.clone_map_file,"cellsize")))
lnD = pcr.cover(lnD, \
pcr.windowaverage(pcr.cover(lnD, pcr.ln(minimum_depth)), 3.00*vos.getMapAttributes(self.clone_map_file,"cellsize")))
lnD = pcr.cover(lnD, \
pcr.windowaverage(pcr.cover(lnD, pcr.ln(minimum_depth)), 0.50))
# smoothing per quarter arc degree
lnD = pcr.windowaverage(lnD, 0.25)
# thickness in meter
self.D = pcr.exp(lnD)
#~ # smoothing bottom elevation
#~ dem_bottom = pcr.windowaverage(self.dem_average - self.D, 0.50)
#~ # thickness in meter
#~ self.D = pcr.max(0.0, self.dem_average - dem_bottom)
#~ # smoothing
#~ self.D = pcr.windowaverage(self.D, 1.50*vos.getMapAttributes(self.clone_map_file,"cellsize"))
# accuracy until cm only
self.D = pcr.rounddown(self.D * 100.) / 100.
self.report(self.D, "damc")
def rainfall_interception_gash(Cmax,
EoverR,
CanopyGapFraction,
Precipitation,
CanopyStorage,
maxevap=9999):
"""
Interception according to the Gash model (For daily timesteps).
"""
# TODO: add other rainfall interception method (lui)
# TODO: Include subdaily Gash model
# TODO: add LAI variation in year
# Hack for stemflow
pt = 0.1 * CanopyGapFraction
P_sat = pcr.max(
pcr.scalar(0.0),
pcr.cover(
(-Cmax / EoverR) * pcr.ln(1.0 - (EoverR /
(1.0 - CanopyGapFraction - pt))),
pcr.scalar(0.0),
),
)
# large storms P > P_sat
largestorms = Precipitation > P_sat
Iwet = pcr.ifthenelse(
largestorms,
((1 - CanopyGapFraction - pt) * P_sat) - Cmax,
Precipitation * (1 - CanopyGapFraction - pt),
)
Isat = pcr.ifthenelse(largestorms, (EoverR) * (Precipitation - P_sat), 0.0)
Idry = pcr.ifthenelse(largestorms, Cmax, 0.0)
Itrunc = 0
StemFlow = pt * Precipitation
ThroughFall = Precipitation - Iwet - Idry - Isat - Itrunc - StemFlow
Interception = Iwet + Idry + Isat + Itrunc
# Non corect for area without any Interception (say open water Cmax -- zero)
CmaxZero = Cmax <= 0.0
ThroughFall = pcr.ifthenelse(CmaxZero, Precipitation, ThroughFall)
Interception = pcr.ifthenelse(CmaxZero, pcr.scalar(0.0), Interception)
StemFlow = pcr.ifthenelse(CmaxZero, pcr.scalar(0.0), StemFlow)
# Now corect for maximum potential evap
OverEstimate = pcr.ifthenelse(Interception > maxevap,
Interception - maxevap, pcr.scalar(0.0))
Interception = pcr.min(Interception, maxevap)
# Add surpluss to the thoughdfall
ThroughFall = ThroughFall + OverEstimate
return ThroughFall, Interception, StemFlow, CanopyStorage
def rainfall_interception_gash(
Cmax, EoverR, CanopyGapFraction, Precipitation, CanopyStorage, maxevap=9999
):
"""
Interception according to the Gash model (For daily timesteps).
"""
# TODO: add other rainfall interception method (lui)
# TODO: Include subdaily Gash model
# TODO: add LAI variation in year
# Hack for stemflow
pt = 0.1 * CanopyGapFraction
P_sat = pcr.max(
pcr.scalar(0.0),
pcr.cover(
(-Cmax / EoverR) * pcr.ln(1.0 - (EoverR / (1.0 - CanopyGapFraction - pt))),
pcr.scalar(0.0),
),
)
# large storms P > P_sat
largestorms = Precipitation > P_sat
Iwet = pcr.ifthenelse(
largestorms,
((1 - CanopyGapFraction - pt) * P_sat) - Cmax,
Precipitation * (1 - CanopyGapFraction - pt),
)
Isat = pcr.ifthenelse(largestorms, (EoverR) * (Precipitation - P_sat), 0.0)
Idry = pcr.ifthenelse(largestorms, Cmax, 0.0)
Itrunc = 0
StemFlow = pt * Precipitation
ThroughFall = Precipitation - Iwet - Idry - Isat - Itrunc - StemFlow
Interception = Iwet + Idry + Isat + Itrunc
# Non corect for area without any Interception (say open water Cmax -- zero)
CmaxZero = Cmax <= 0.0
ThroughFall = pcr.ifthenelse(CmaxZero, Precipitation, ThroughFall)
Interception = pcr.ifthenelse(CmaxZero, pcr.scalar(0.0), Interception)
StemFlow = pcr.ifthenelse(CmaxZero, pcr.scalar(0.0), StemFlow)
# Now corect for maximum potential evap
OverEstimate = pcr.ifthenelse(
Interception > maxevap, Interception - maxevap, pcr.scalar(0.0)
)
Interception = pcr.min(Interception, maxevap)
# Add surpluss to the thoughdfall
ThroughFall = ThroughFall + OverEstimate
return ThroughFall, Interception, StemFlow, CanopyStorage
def correction_per_aquifer(self, id):
id = float(id); print id
# identify aquifer mask
aquifer_landmask = pcr.ifthen(self.margat_aquifer_map == pcr.nominal(id), pcr.boolean(1))
# obtain the logarithmic value of Margat value
exp_margat_thick = pcr.cellvalue(\
pcr.mapmaximum(\
pcr.ifthen(aquifer_landmask, pcr.ln(self.margat_aquifer_thickness))), 1)[0]
# obtain the logarithmic values of 'estimated thickness'
exp_approx_thick = pcr.ifthen(aquifer_landmask, pcr.ln(self.approx_thick))
exp_approx_thick_array = pcr.pcr2numpy(exp_approx_thick, vos.MV)
exp_approx_thick_array = exp_approx_thick_array[exp_approx_thick_array <> vos.MV]
exp_approx_thick_array = exp_approx_thick_array[exp_approx_thick_array < 1000000.]
# identify percentile
exp_approx_minim = np.percentile(exp_approx_thick_array, 2.5);
exp_approx_maxim = np.percentile(exp_approx_thick_array, 97.5);
# correcting
exp_approx_thick_correct = ( exp_approx_thick - exp_approx_minim ) / \
( exp_approx_maxim - exp_approx_minim )
exp_approx_thick_correct = pcr.max(0.0, exp_approx_thick_correct )
exp_approx_thick_correct *= pcr.max(0.0,\
( exp_margat_thick - exp_approx_minim ) )
exp_approx_thick_correct += pcr.min(exp_approx_minim, exp_approx_thick)
# maximum thickness
exp_approx_thick_correct = pcr.min(exp_margat_thick, exp_approx_thick_correct)
# corrected thickness
correct_thickness = pcr.exp(exp_approx_thick_correct)
return correct_thickness
def inverse_gumbel(p_zero, loc, scale, return_period):
"""
This function computes values for a given return period using the zero probability, location and shape
parameters given.
"""
p = pcr.scalar(1. - 1./return_period)
# p_residual is the probability density function of the population consisting of any values above zero
p_residual = pcr.min(pcr.max((p - p_zero) / (1.0 - p_zero), 0.0), 1.0)
#~ # - alternative equation found on: https://repos.deltares.nl/repos/Hydrology/trunk/GLOFRIS/src/rp_bias_corr.py (see the method inv_gumbel)
#~ p_residual = np.minimum(np.maximum((p-p_zero)/(1-p_zero), 0), np.float64(1-1./1e9)) # I think this is the correct equation"""
reduced_variate = -pcr.ln(-pcr.ln(p_residual))
flvol = reduced_variate * scale + loc
# infinite numbers can occur. reduce these to zero!
# if any values become negative due to the statistical extrapolation, fix them to zero (may occur if the sample size for fitting was small and a small return period is requested)
flvol = pcr.max(0.0, pcr.cover(flvol, 0.0))
return flvol
def __init__(self, clone_map_file,\
input_thickness_netcdf_file,\
input_thickness_var_name ,\
margat_aquifers,\
tmp_directory,
landmask = None,
arcdegree = True):
object.__init__(self)
# aquifer table from Margat and van der Gun
self.margat_aquifers = margat_aquifers
# clone map
self.clone_map_file = clone_map_file
self.clone_map_attr = vos.getMapAttributesALL(self.clone_map_file)
if arcdegree == True:
self.clone_map_attr['cellsize'] = round(self.clone_map_attr['cellsize'] * 360000.)/360000.
xmin = self.clone_map_attr['xUL']
xmax = xmin + self.clone_map_attr['cols'] * self.clone_map_attr['cellsize']
ymax = self.clone_map_attr['yUL']
ymin = ymax - self.clone_map_attr['rows'] * self.clone_map_attr['cellsize']
pcr.setclone(self.clone_map_file)
# temporary directory
self.tmp_directory = tmp_directory
# thickness approximation (unit: m, file in netcdf with variable name = average
self.approx_thick = vos.netcdf2PCRobjCloneWithoutTime(input_thickness_netcdf_file,\
input_thickness_var_name,\
self.clone_map_file)
# set minimum value to 0.1 mm
self.approx_thick = pcr.max(0.0001, self.approx_thick)
# rasterize the shape file
# -
# save current directory and move to temporary directory
current_dir = str(os.getcwd()+"/")
os.chdir(str(self.tmp_directory))
#
cmd_line = 'gdal_rasterize -a MARGAT ' # layer name = MARGAT
cmd_line += '-te '+str(xmin)+' '+str(ymin)+' '+str(xmax)+' '+str(ymax)+ ' '
cmd_line += '-tr '+str(self.clone_map_attr['cellsize'])+' '+str(self.clone_map_attr['cellsize'])+' '
cmd_line += str(margat_aquifers['shapefile'])+' '
cmd_line += 'tmp.tif'
print(cmd_line); os.system(cmd_line)
#
# make it nomial
cmd_line = 'pcrcalc tmp.map = "nominal(tmp.tif)"'
print(cmd_line); os.system(cmd_line)
#
# make sure that the clone map is correct
cmd_line = 'mapattr -c '+str(self.clone_map_file)+' tmp.map'
print(cmd_line); os.system(cmd_line)
#
# read the map
self.margat_aquifer_map = pcr.nominal(pcr.readmap("tmp.map"))
#
# clean temporary directory and return to the original directory
vos.clean_tmp_dir(self.tmp_directory)
os.chdir(current_dir)
# extend the extent of each aquifer
self.margat_aquifer_map = pcr.cover(self.margat_aquifer_map,
pcr.windowmajority(self.margat_aquifer_map, 1.25))
# assign aquifer thickness, unit: m (lookuptable operation)
self.margat_aquifer_thickness = pcr.lookupscalar(margat_aquifers['txt_table'], self.margat_aquifer_map)
self.margat_aquifer_thickness = pcr.ifthen(self.margat_aquifer_thickness > 0., \
self.margat_aquifer_thickness)
#~ pcr.report(self.margat_aquifer_thickness,"thick.map"); os.system("aguila thick.map")
# aquifer map
self.margat_aquifer_map = pcr.ifthen(self.margat_aquifer_thickness > 0., self.margat_aquifer_map)
# looping per aquifer: cirrecting or rescaling
aquifer_ids = np.unique(pcr.pcr2numpy(pcr.scalar(self.margat_aquifer_map), vos.MV))
aquifer_ids = aquifer_ids[aquifer_ids > 0]
aquifer_ids = aquifer_ids[aquifer_ids < 10000]
self.rescaled_thickness = None
for id in aquifer_ids:
rescaled_thickness = self.correction_per_aquifer(id)
try:
self.rescaled_thickness = pcr.cover(self.rescaled_thickness, rescaled_thickness)
except:
self.rescaled_thickness = rescaled_thickness
# integrating
ln_aquifer_thickness = self.mapFilling( pcr.ln(self.rescaled_thickness), pcr.ln(self.approx_thick) )
self.aquifer_thickness = pcr.exp(ln_aquifer_thickness)
#~ pcr.report(self.aquifer_thickness,"thick.map"); os.system("aguila thick.map")
# cropping only in the landmask region
if landmask == None: landmask = self.clone_map_file
self.landmask = pcr.defined(vos.readPCRmapClone(landmask,self.clone_map_file,self.tmp_directory))
#~ pcr.report(self.landmask,"test.map"); os.system("aguila test.map")
self.aquifer_thickness = pcr.ifthen(self.landmask, self.aquifer_thickness)
def integralLogisticFunction(self, x):
#-returns a tupple of two values holding the integral of the logistic functions
# of (x) and (-x)
logInt = pcr.ln(pcr.exp(-x) + 1)
return logInt, x + logInt
def dynamic(self):
"""
*Required*
This is where all the time dependent functions are executed. Time dependent
output should also be saved here.
"""
# print 'useETPdata' , self.UseETPdata
# Put the W3RA here. Stuff from W3RA_timestep_model.m
# read meteo from file
self.logger.debug("Running for: " + str(self.currentdatetime))
self.PRECIP = pcr.cover(
self.wf_readmap(self.PRECIP_mapstack, 0.0), pcr.scalar(0.0)
) # mm
if self.UseETPdata == 1:
self.TDAY = pcr.cover(
self.wf_readmap(self.TDAY_mapstack, 10.0), pcr.scalar(10.0)
) # T in degC
self.EPOT = pcr.cover(
self.wf_readmap(self.EPOT_mapstack, 0.0), pcr.scalar(0.0)
) # mm
self.WINDSPEED = pcr.cover(
self.wf_readmap(self.WINDSPEED_mapstack, default=1.0), pcr.scalar(1.0)
)
self.AIRPRESS = pcr.cover(
self.wf_readmap(self.AIRPRESS_mapstack, default=980.0),
pcr.scalar(980.0),
)
# print "Using climatology for wind, air pressure and albedo."
elif self.UseETPdata == 0:
self.TMIN = pcr.cover(
self.wf_readmap(self.TMIN_mapstack, 10.0), pcr.scalar(10.0)
) # T in degC
self.TMAX = pcr.cover(
self.wf_readmap(self.TMAX_mapstack, 10.0), pcr.scalar(10.0)
) # T in degC
self.RAD = pcr.cover(
self.wf_readmap(self.RAD_mapstack, 10.0), pcr.scalar(10.0)
) # W m-2 s-1
self.WINDSPEED = pcr.cover(
self.wf_readmap(self.WINDSPEED_mapstack, 10.0), pcr.scalar(10.0)
) # ms-1
self.AIRPRESS = pcr.cover(
self.wf_readmap(self.AIRPRESS_mapstack, 10.0), pcr.scalar(10.0)
) # Pa
self.ALBEDO = pcr.cover(
self.wf_readmapClimatology(self.ALBEDO_mapstack, default=0.1),
pcr.scalar(0.1),
)
self.wf_multparameters()
doy = self.currentdatetime.timetuple().tm_yday
# conversion daylength
pcr.setglobaloption("radians")
m = pcr.scalar(1) - pcr.tan(
(self.latitude * pcr.scalar(math.pi) / pcr.scalar(180))
) * pcr.tan(
(
(pcr.scalar(23.439) * pcr.scalar(math.pi) / pcr.scalar(180))
* pcr.cos(
pcr.scalar(2)
* pcr.scalar(math.pi)
* (doy + pcr.scalar(9))
/ pcr.scalar(365.25)
)
)
)
self.fday = pcr.min(
pcr.max(
pcr.scalar(0.02),
pcr.scalar(
pcr.acos(
pcr.scalar(1)
- pcr.min(pcr.max(pcr.scalar(0), m), pcr.scalar(2))
)
)
/ pcr.scalar(math.pi),
),
pcr.scalar(1),
) # fraction daylength
# Assign forcing and estimate effective meteorological variables
Pg = self.PRECIP # mm
if self.UseETPdata == 1:
Ta = self.TDAY # T in degC
T24 = self.TDAY # T in degC
elif self.UseETPdata == 0:
Rg = pcr.max(
self.RAD, pcr.scalar(0.0001)
) # already in W m-2 s-1; set minimum of 0.01 to avoid numerical problems
Ta = self.TMIN + pcr.scalar(0.75) * (self.TMAX - self.TMIN) # T in degC
T24 = self.TMIN + pcr.scalar(0.5) * (self.TMAX - self.TMIN) # T in degC
pex = pcr.min(
pcr.scalar(17.27) * (self.TMIN) / (pcr.scalar(237.3) + self.TMIN),
pcr.scalar(10),
) # T in degC
pe = pcr.min(
pcr.scalar(610.8) * (pcr.exp(pex)), pcr.scalar(10000.0)
) # Mean actual vapour pressure, from dewpoint temperature
# rescale factor because windspeed climatology is at 2m
WindFactor = 1.0
# u2 = pcr.scalar(WindFactor)*self.WINDSPEED*(pcr.scalar(1)-(pcr.scalar(1)-self.fday)*scalar(0.25))/self.fday
self.u2 = (
pcr.scalar(WindFactor)
* self.WINDSPEED
* (pcr.scalar(1) - (pcr.scalar(1) - self.fday) * pcr.scalar(0.25))
/ self.fday
)
pair = self.AIRPRESS # already in Pa
# diagnostic equations
self.LAI1 = self.SLA1 * self.Mleaf1 # (5.3)
self.LAI2 = self.SLA2 * self.Mleaf2 # (5.3)
fveg1 = pcr.max(1 - pcr.exp(-self.LAI1 / self.LAIref1), 0.000001) # (5.3)
fveg2 = pcr.max(1 - pcr.exp(-self.LAI2 / self.LAIref2), 0.000001)
# Vc = pcr.max(0,EVI-0.07)/fveg
fsoil1 = 1 - fveg1
fsoil2 = 1 - fveg2
w01 = self.S01 / self.S0FC1 # (2.1)
w02 = self.S02 / self.S0FC2
ws1 = self.Ss1 / self.SsFC1 # (2.1)
ws2 = self.Ss2 / self.SsFC2
wd1 = self.Sd1 / self.SdFC1 # (2.1)
wd2 = self.Sd2 / self.SdFC2 # (2.1)
TotSnow1 = self.FreeWater1 + self.DrySnow1
TotSnow2 = self.FreeWater2 + self.DrySnow2
wSnow1 = self.FreeWater1 / (TotSnow1 + 1e-5)
wSnow2 = self.FreeWater2 / (TotSnow2 + 1e-5)
# Spatialise catchment fractions
Sgfree = pcr.max(self.Sg, 0.0)
# JS: Not sure if this is translated properly....
# for i=1:par.Nhru
fwater1 = pcr.min(0.005, (0.007 * self.Sr ** 0.75))
fwater2 = pcr.min(0.005, (0.007 * self.Sr ** 0.75))
fsat1 = pcr.min(
1.0, pcr.max(pcr.min(0.005, 0.007 * self.Sr ** 0.75), Sgfree / self.Sgref)
)
fsat2 = pcr.min(
1.0, pcr.max(pcr.min(0.005, 0.007 * self.Sr ** 0.75), Sgfree / self.Sgref)
)
Sghru1 = self.Sg
Sghru2 = self.Sg
# CALCULATION OF PET
# Conversions and coefficients (3.1)
pesx = pcr.min(
(pcr.scalar(17.27) * Ta / (pcr.scalar(237.3) + Ta)), pcr.scalar(10)
)
pes = pcr.min(
pcr.scalar((pcr.scalar(610.8)) * pcr.exp(pesx)), pcr.scalar(10000)
) # saturated vapour pressure
# fRH = pe/pes # relative air humidity -------------- check
cRE = 0.03449 + 4.27e-5 * Ta
# Caero = self.fday*0.176*(1+Ta/209.1)*(pair-0.417*pe)*(1-fRH) -------------- check
# keps = 1.4e-3*((Ta/187)**2+Ta/107+1)*(6.36*pair+pe)/pes
ga1 = self.ku2_1 * self.u2
ga2 = self.ku2_2 * self.u2
if self.UseETPdata == 1:
self.E01 = pcr.max(self.EPOT, 0)
self.E02 = pcr.max(self.EPOT, 0)
keps = (
0.655e-3 * pair / pes
) # See Appendix A3 (http://www.clw.csiro.au/publications/waterforahealthycountry/2010/wfhc-aus-water-resources-assessment-system.pdf) -------------------------------- check!
elif self.UseETPdata == 0:
# Aerodynamic conductance (3.7)
ns_alb = self.ALBEDO
Rgeff = Rg / self.fday
# shortwave radiation balance (3.2)
# alb_veg = 0.452*Vc
# alb_soil = alb_wet+(alb_dry-alb_wet)*exp(-w0/w0ref_alb)
# new equations for snow albedo
alb_snow1 = 0.65 - 0.2 * wSnow1 # assumed; ideally some lit research needed
alb_snow2 = 0.65 - 0.2 * wSnow2
fsnow1 = pcr.min(
1.0, 0.05 * TotSnow1
) # assumed; ideally some lit research needed
fsnow2 = pcr.min(1.0, 0.05 * TotSnow2)
# alb = fveg*alb_veg+(fsoil-fsnow)*alb_soil +fsnow*alb_snow
# alb = albedo
alb1 = (1 - fsnow1) * ns_alb + fsnow1 * alb_snow1
alb2 = (1 - fsnow2) * ns_alb + fsnow2 * alb_snow2
RSn1 = (1 - alb1) * Rgeff
RSn2 = (1 - alb2) * Rgeff
# long wave radiation balance (3.3 to 3.5)
StefBolz = 5.67e-8
Tkelv = Ta + 273.16
self.RLin = (0.65 * (pe / Tkelv) ** 0.14) * StefBolz * Tkelv ** 4 # (3.3)
RLout = StefBolz * Tkelv ** 4.0 # (3.4)
self.RLn = self.RLin - RLout
self.fGR1 = self.Gfrac_max1 * (1 - pcr.exp(-fsoil1 / self.fvegref_G1))
self.fGR2 = self.Gfrac_max2 * (
1 - pcr.exp(-fsoil2 / self.fvegref_G2)
) # (3.5)
self.Rneff1 = (RSn1 + self.RLn) * (1 - self.fGR1)
self.Rneff2 = (RSn2 + self.RLn) * (1 - self.fGR2)
fRH = pe / pes # relative air humidity
Caero = (
self.fday * 0.176 * (1 + Ta / 209.1) * (pair - 0.417 * pe) * (1 - fRH)
) # -------------- check
keps = 1.4e-3 * ((Ta / 187) ** 2 + Ta / 107 + 1) * (6.36 * pair + pe) / pes
# Potential evaporation
kalpha1 = 1 + Caero * ga1 / self.Rneff1
kalpha2 = 1 + Caero * ga2 / self.Rneff2
self.E01 = cRE * (1 / (1 + keps)) * kalpha1 * self.Rneff1 * self.fday
self.E02 = cRE * (1 / (1 + keps)) * kalpha2 * self.Rneff2 * self.fday
self.E01 = pcr.max(self.E01, 0)
self.E02 = pcr.max(self.E02, 0)
# CALCULATION OF ET FLUXES AND ROOT WATER UPTAKE
# Root water uptake constraint (4.4)
Usmax1 = pcr.max(
0, self.Us01 * pcr.min(1, ws1 / self.wslimU1)
) ##0-waarden omdat ws1 bevat 0-waarden (zie regel 116)
Usmax2 = pcr.max(
0, self.Us02 * pcr.min(1, ws2 / self.wslimU2)
) ##0-waarden omdat ws2 bevat 0-waarden (zie regel 117)
Udmax1 = pcr.max(
0, self.Ud01 * pcr.min(1, wd1 / self.wdlimU1)
) ##0-waarden omdat wd1 bevat 0-waarden (zie regel 118)
Udmax2 = pcr.max(
0, self.Ud02 * pcr.min(1, wd2 / self.wdlimU2)
) ##0-waarden omdat wd2 bevat 0-waarden (zie regel 119)
# U0max = pcr.max(0, Us0*min(1,w0/wslimU))
U0max1 = pcr.scalar(0)
U0max2 = pcr.scalar(0)
Utot1 = pcr.max(Usmax1, pcr.max(Udmax1, U0max1))
Utot2 = pcr.max(Usmax2, pcr.max(Udmax2, U0max2))
# Maximum transpiration (4.3)
Gsmax1 = self.cGsmax1 * self.Vc1
gs1 = fveg1 * Gsmax1
ft1 = 1 / (1 + (keps / (1 + keps)) * ga1 / gs1)
Etmax1 = ft1 * self.E01
Gsmax2 = self.cGsmax2 * self.Vc2
gs2 = fveg2 * Gsmax2
ft2 = 1 / (1 + (keps / (1 + keps)) * ga2 / gs2)
Etmax2 = ft2 * self.E02
# Actual transpiration (4.1)
Et1 = pcr.min(Utot1, Etmax1)
Et2 = pcr.min(Utot2, Etmax2)
# # Root water uptake distribution (2.3)
U01 = pcr.max(
pcr.min((U0max1 / (U0max1 + Usmax1 + Udmax1)) * Et1, self.S01 - 1e-2), 0
)
Us1 = pcr.max(
pcr.min((Usmax1 / (U0max1 + Usmax1 + Udmax1)) * Et1, self.Ss1 - 1e-2), 0
)
Ud1 = pcr.max(
pcr.min((Udmax1 / (U0max1 + Usmax1 + Udmax1)) * Et1, self.Sd1 - 1e-2), 0
)
Et1 = U01 + Us1 + Ud1 # to ensure mass balance
U02 = pcr.max(
pcr.min((U0max2 / (U0max2 + Usmax2 + Udmax2)) * Et2, self.S02 - 1e-2), 0
)
Us2 = pcr.max(
pcr.min((Usmax2 / (U0max2 + Usmax2 + Udmax2)) * Et2, self.Ss2 - 1e-2), 0
)
Ud2 = pcr.max(
pcr.min((Udmax2 / (U0max2 + Usmax2 + Udmax2)) * Et2, self.Sd2 - 1e-2), 0
)
Et2 = U02 + Us2 + Ud2
# Soil evaporation (4.5)
self.S01 = pcr.max(0, self.S01 - U01)
self.S02 = pcr.max(0, self.S02 - U02)
w01 = self.S01 / self.S0FC1 # (2.1)
w02 = self.S02 / self.S0FC2 # (2.1)
fsoilE1 = self.FsoilEmax1 * pcr.min(1, w01 / self.w0limE1)
fsoilE2 = self.FsoilEmax2 * pcr.min(1, w02 / self.w0limE2)
Es1 = pcr.max(
0, pcr.min(((1 - fsat1) * fsoilE1 * (self.E01 - Et1)), self.S01 - 1e-2)
)
Es2 = pcr.max(
0, pcr.min(((1 - fsat2) * fsoilE2 * (self.E02 - Et2)), self.S02 - 1e-2)
)
# Groundwater evaporation (4.6)
Eg1 = pcr.min((fsat1 - fwater1) * self.FsoilEmax1 * (self.E01 - Et1), Sghru1)
Eg2 = pcr.min((fsat2 - fwater2) * self.FsoilEmax2 * (self.E02 - Et2), Sghru2)
# Open water evaporation (4.7)
Er1 = pcr.min(fwater1 * self.FwaterE1 * pcr.max(0, self.E01 - Et1), self.Sr)
Er2 = pcr.min(fwater2 * self.FwaterE2 * pcr.max(0, self.E02 - Et2), self.Sr)
# Rainfall interception evaporation (4.2)
Sveg1 = self.S_sls1 * self.LAI1
fER1 = self.ER_frac_ref1 * fveg1
Pwet1 = -pcr.ln(1 - fER1 / fveg1) * Sveg1 / fER1
Ei1 = pcr.scalar(Pg < Pwet1) * fveg1 * Pg + pcr.scalar(Pg >= Pwet1) * (
fveg1 * Pwet1 + fER1 * (Pg - Pwet1)
)
Sveg2 = self.S_sls2 * self.LAI2
fER2 = self.ER_frac_ref2 * fveg2
Pwet2 = -pcr.ln(1 - fER2 / fveg2) * Sveg2 / fER2
Ei2 = pcr.scalar(Pg < Pwet2) * fveg2 * Pg + pcr.scalar(Pg >= Pwet2) * (
fveg2 * Pwet2 + fER2 * (Pg - Pwet2)
)
self.EACT1 = (Et1 + Es1 + Eg1 + Er1 + Ei1) * self.Fhru1
self.EACT2 = (Et2 + Es2 + Eg2 + Er2 + Ei2) * self.Fhru2
self.EACT = self.EACT1 + self.EACT2
# HBV snow routine
# Matlab: function [FreeWater,DrySnow,InSoil]=snow_submodel(Precipitation,Temperature,FreeWater,DrySnow)
# derived from HBV-96 shared by Jaap Schellekens (Deltares) in May 2011
# original in PCraster, adapted to Matlab by Albert van Dijk
# HBV snow routine
Pn1 = Pg - Ei1
Pn2 = Pg - Ei2
Precipitation1 = Pn1
Precipitation2 = Pn2
# Snow routine parameters
# parameters
# TODO: Check this, not sure if this works.......
x = pcr.scalar(Pg)
Cfmax1 = 0.6 * 3.75653 * pcr.scalar(x >= 0)
Cfmax2 = 3.75653 * pcr.scalar(x >= 0)
TT1 = -1.41934 * pcr.scalar(
x >= 0
) # critical temperature for snowmelt and refreezing
TT2 = -1.41934 * pcr.scalar(x >= 0)
TTI1 = 1.00000 * pcr.scalar(
x >= 0
) # defines interval in which precipitation falls as rainfall and snowfall
TTI2 = 1.00000 * pcr.scalar(x >= 0)
CFR1 = 0.05000 * pcr.scalar(
x >= 0
) # refreezing efficiency constant in refreezing of freewater in snow
CFR2 = 0.05000 * pcr.scalar(x >= 0)
WHC1 = 0.10000 * pcr.scalar(x >= 0)
WHC2 = 0.10000 * pcr.scalar(x >= 0)
# Partitioning into fractions rain and snow
Temperature = T24 # Dimmie, let op: tijdelijke regel!!
RainFrac1 = pcr.max(0, pcr.min((Temperature - (TT1 - TTI1 / 2)) / TTI1, 1))
RainFrac2 = pcr.max(0, pcr.min((Temperature - (TT2 - TTI2 / 2)) / TTI2, 1))
SnowFrac1 = 1 - RainFrac1 # fraction of precipitation which falls as snow
SnowFrac2 = 1 - RainFrac2
# Snowfall/melt calculations
SnowFall1 = SnowFrac1 * Precipitation1 # snowfall depth
SnowFall2 = SnowFrac2 * Precipitation2
RainFall1 = RainFrac1 * Precipitation1 # rainfall depth
RainFall2 = RainFrac2 * Precipitation2
PotSnowMelt1 = Cfmax1 * pcr.max(
0, Temperature - TT1
) # Potential snow melt, based on temperature
PotSnowMelt2 = Cfmax2 * pcr.max(0, Temperature - TT2)
PotRefreezing1 = (
Cfmax1 * CFR1 * pcr.max(TT1 - Temperature, 0)
) # Potential refreezing, based on temperature
PotRefreezing2 = Cfmax2 * CFR2 * pcr.max(TT2 - Temperature, 0)
Refreezing1 = pcr.min(PotRefreezing1, self.FreeWater1) # actual refreezing
Refreezing2 = pcr.min(PotRefreezing2, self.FreeWater2)
SnowMelt1 = pcr.min(PotSnowMelt1, self.DrySnow1) # actual snow melt
SnowMelt2 = pcr.min(PotSnowMelt2, self.DrySnow2)
self.DrySnow1 = (
self.DrySnow1 + SnowFall1 + Refreezing1 - SnowMelt1
) # dry snow content
self.DrySnow2 = self.DrySnow2 + SnowFall2 + Refreezing2 - SnowMelt2
self.FreeWater1 = self.FreeWater1 - Refreezing1 # free water content in snow
self.FreeWater2 = self.FreeWater2 - Refreezing2
MaxFreeWater1 = self.DrySnow1 * WHC1
MaxFreeWater2 = self.DrySnow2 * WHC2
self.FreeWater1 = self.FreeWater1 + SnowMelt1 + RainFall1
self.FreeWater2 = self.FreeWater2 + SnowMelt2 + RainFall2
InSoil1 = pcr.max(
self.FreeWater1 - MaxFreeWater1, 0
) # abundant water in snow pack which goes into soil
InSoil2 = pcr.max(self.FreeWater2 - MaxFreeWater2, 0)
self.FreeWater1 = self.FreeWater1 - InSoil1
self.FreeWater2 = self.FreeWater2 - InSoil2
# End of Snow Module
# CALCULATION OF WATER BALANCES
# surface water fluxes (2.2)
NetInSoil1 = pcr.max(0, (InSoil1 - self.InitLoss1))
NetInSoil2 = pcr.max(0, (InSoil2 - self.InitLoss2))
Rhof1 = (1 - fsat1) * (NetInSoil1 / (NetInSoil1 + self.PrefR1)) * NetInSoil1
Rhof2 = (1 - fsat2) * (NetInSoil2 / (NetInSoil2 + self.PrefR2)) * NetInSoil2
Rsof1 = fsat1 * NetInSoil1
Rsof2 = fsat2 * NetInSoil2
QR1 = Rhof1 + Rsof1
QR2 = Rhof2 + Rsof2
I1 = InSoil1 - QR1
I2 = InSoil2 - QR2
# SOIL WATER BALANCES (2.1 & 2.4)
# Topsoil water balance (S0)
self.S01 = self.S01 + I1 - Es1 - U01
self.S02 = self.S02 + I2 - Es2 - U02
SzFC1 = self.S0FC1
SzFC2 = self.S0FC2
Sz1 = self.S01
Sz2 = self.S02
wz1 = pcr.max(1e-2, Sz1) / SzFC1
wz2 = pcr.max(1e-2, Sz2) / SzFC2
self.TMP = SzFC1
# TODO: Check if this works
fD1 = pcr.scalar(wz1 > 1) * pcr.max(self.FdrainFC1, 1 - 1 / wz1) + pcr.scalar(
wz1 <= 1
) * self.FdrainFC1 * pcr.exp(self.beta1 * pcr.scalar(wz1 - 1))
fD2 = pcr.scalar(wz2 > 1) * pcr.max(self.FdrainFC2, 1 - 1 / wz2) + pcr.scalar(
wz2 <= 1
) * self.FdrainFC2 * pcr.exp(self.beta2 * pcr.scalar(wz2 - 1))
Dz1 = pcr.max(0, pcr.min(fD1 * Sz1, Sz1 - 1e-2))
Dz2 = pcr.max(0, pcr.min(fD2 * Sz2, Sz2 - 1e-2))
D01 = Dz1
D02 = Dz2
self.S01 = self.S01 - D01
self.S02 = self.S02 - D02
# Shallow root zone water balance (Ss)
self.Ss1 = self.Ss1 + D01 - Us1
self.Ss2 = self.Ss2 + D02 - Us2
SzFC1 = self.SsFC1
SzFC2 = self.SsFC2
Sz1 = self.Ss1
Sz2 = self.Ss2
wz1 = pcr.max(1e-2, Sz1) / SzFC1
wz2 = pcr.max(1e-2, Sz2) / SzFC2
fD1 = pcr.scalar(wz1 > 1) * pcr.max(self.FdrainFC1, 1 - 1 / wz1) + pcr.scalar(
wz1 <= 1
) * self.FdrainFC1 * pcr.exp(self.beta1 * pcr.scalar(wz1 - 1))
fD2 = pcr.scalar(wz2 > 1) * pcr.max(self.FdrainFC2, 1 - 1 / wz2) + pcr.scalar(
wz2 <= 1
) * self.FdrainFC2 * pcr.exp(self.beta2 * pcr.scalar(wz2 - 1))
Dz1 = pcr.max(0, pcr.min(fD1 * Sz1, Sz1 - 1e-2))
Dz2 = pcr.max(0, pcr.min(fD2 * Sz2, Sz2 - 1e-2))
Ds1 = Dz1
Ds2 = Dz2
self.Ss1 = self.Ss1 - Ds1
self.Ss2 = self.Ss2 - Ds2
# Deep root zone water balance (Sd) (2.6)
self.Sd1 = self.Sd1 + Ds1 - Ud1
self.Sd2 = self.Sd2 + Ds2 - Ud2
SzFC1 = self.SdFC1
SzFC2 = self.SdFC2
Sz1 = self.Sd1
Sz2 = self.Sd2
wz1 = pcr.max(1e-2, Sz1) / SzFC1
wz2 = pcr.max(1e-2, Sz2) / SzFC2
fD1 = pcr.scalar(wz1 > 1) * pcr.max(self.FdrainFC1, 1 - 1 / wz1) + pcr.scalar(
wz1 <= 1
) * self.FdrainFC1 * pcr.exp(self.beta1 * pcr.scalar(wz1 - 1))
fD2 = pcr.scalar(wz2 > 1) * pcr.max(self.FdrainFC2, 1 - 1 / wz2) + pcr.scalar(
wz2 <= 1
) * self.FdrainFC2 * pcr.exp(self.beta2 * pcr.scalar(wz2 - 1))
Dz1 = pcr.max(0, pcr.min(fD1 * Sz1, Sz1 - 1e-2))
Dz2 = pcr.max(0, pcr.min(fD2 * Sz2, Sz2 - 1e-2))
Dd1 = Dz1
Dd2 = Dz2
self.Sd1 = self.Sd1 - Dd1
self.Sd2 = self.Sd2 - Dd2
Y1 = pcr.min(
self.Fgw_conn1 * pcr.max(0, self.wdlimU1 * self.SdFC1 - self.Sd1),
Sghru1 - Eg1,
)
Y2 = pcr.min(
self.Fgw_conn2 * pcr.max(0, self.wdlimU2 * self.SdFC2 - self.Sd2),
Sghru2 - Eg2,
)
# Y = Fgw_conn.*max(0,wdlimU.*SdFC-Sd); #nog matlab script
self.Sd1 = self.Sd1 + Y1
self.Sd2 = self.Sd2 + Y2
# CATCHMENT WATER BALANCE
# Groundwater store water balance (Sg) (2.5)
NetGf = (self.Fhru1 * (Dd1 - Eg1 - Y1)) + (self.Fhru2 * (Dd2 - Eg2 - Y2))
self.Sg = self.Sg + NetGf
Sgfree = pcr.max(self.Sg, 0)
Qg = pcr.min(Sgfree, (1 - pcr.exp(-self.K_gw)) * Sgfree)
self.Sg = self.Sg - Qg
# Surface water store water balance (Sr) (2.7)
self.Sr = self.Sr + (self.Fhru1 * (QR1 - Er1)) + (self.Fhru2 * (QR2 - Er2)) + Qg
self.Qtot = pcr.min(self.Sr, (1 - pcr.exp(-self.K_rout)) * self.Sr)
self.Sr = self.Sr - self.Qtot
# VEGETATION ADJUSTMENT (5)
fveq1 = (
(1 / pcr.max((self.E01 / Utot1) - 1, 1e-3))
* (keps / (1 + keps))
* (ga1 / Gsmax1)
)
fveq2 = (
(1 / pcr.max((self.E02 / Utot2) - 1, 1e-3))
* (keps / (1 + keps))
* (ga2 / Gsmax2)
)
fvmax1 = 1 - pcr.exp(-self.LAImax1 / self.LAIref1)
fvmax2 = 1 - pcr.exp(-self.LAImax2 / self.LAIref2)
fveq1 = pcr.min(fveq1, fvmax1)
fveq2 = pcr.min(fveq2, fvmax2)
dMleaf1 = -pcr.ln(1 - fveq1) * self.LAIref1 / self.SLA1 - self.Mleaf1
dMleaf2 = -pcr.ln(1 - fveq2) * self.LAIref2 / self.SLA2 - self.Mleaf2
# Mleafnet1 = dMleaf1 * (dMleaf1/self.Tgrow1) + dMleaf1 * dMleaf1/self.Tsenc1
# Mleafnet2 = dMleaf2 * (dMleaf1/self.Tgrow2) + dMleaf2 * dMleaf2/self.Tsenc2
Mleafnet1 = (
pcr.scalar(dMleaf1 > 0) * (dMleaf1 / self.Tgrow1)
+ pcr.scalar(dMleaf1 < 0) * dMleaf1 / self.Tsenc1
)
Mleafnet2 = (
pcr.scalar(dMleaf2 > 0) * (dMleaf2 / self.Tgrow2)
+ pcr.scalar(dMleaf2 < 0) * dMleaf2 / self.Tsenc2
)
self.Mleaf1 = self.Mleaf1 + Mleafnet1
self.Mleaf2 = self.Mleaf2 + Mleafnet2
self.LAI1 = self.SLA1 * self.Mleaf1 # (5.3)
self.LAI2 = self.SLA2 * self.Mleaf2
# Updating diagnostics
self.LAI1 = self.SLA1 * self.Mleaf1 # (5.3)
self.LAI2 = self.SLA2 * self.Mleaf2
fveg1 = 1 - pcr.exp(-self.LAI1 / self.LAIref1) # (5.3)
fveg2 = 1 - pcr.exp(-self.LAI2 / self.LAIref2)
fsoil1 = 1 - fveg1
fsoil2 = 1 - fveg2
w01 = self.S01 / self.S0FC1 # (2.1)
w02 = self.S02 / self.S0FC2
ws1 = self.Ss1 / self.SsFC1 # (2.1)
ws2 = self.Ss2 / self.SsFC2
wd1 = self.Sd1 / self.SdFC1 # (2.1)
wd2 = self.Sd2 / self.SdFC2
def initial(self):
"""
*Required*
Initial part of the model, executed only once. It reads all static model
information (parameters) and sets-up the variables used in modelling.
This function is required. The contents is free. However, in order to
easily connect to other models it is advised to adhere to the directory
structure used in the other models.
"""
#: pcraster option to calculate with units or cells. Not really an issue
#: in this model but always good to keep in mind.
pcr.setglobaloption("unittrue")
pcr.setglobaloption(
"radians"
) # Needed as W3RA was originally written in matlab
# SET GLBOAL PARAMETER VALUES (however not used in original script)
# Nhru=2
# K_gw_scale=0.0146
# K_gw_shape=0.0709
# K_rout_scale=0.1943
# K_rout_int=0.0589
# FdrainFC_scale=0.2909
# FdrainFC_shape=0.5154
# Sgref_scale=3.2220
# Sgref_shape=3.2860
# fday=0.5000
self.timestepsecs = int(
configget(self.config, "model", "timestepsecs", "86400")
)
self.reinit = int(configget(self.config, "run", "reinit", "0"))
self.OverWriteInit = int(configget(self.config, "model", "OverWriteInit", "0"))
self.UseETPdata = int(
configget(self.config, "model", "UseETPdata", "1")
) # 1: Use ETP data, 0: Compute ETP from meteorological variables
self.logger.debug("use DATA: " + str(self.UseETPdata))
self.basetimestep = 86400
self.SaveMapDir = self.Dir + "/" + self.runId + "/outmaps"
# Define here the W3RA mapstacks (best to read these via netcdf)
self.TMAX_mapstack = self.Dir + configget(
self.config, "inputmapstacks", "TMAX", "/inmaps/TMAX"
)
self.TMIN_mapstack = self.Dir + configget(
self.config, "inputmapstacks", "TMIN", "/inmaps/TMIN"
)
self.TDAY_mapstack = self.Dir + configget(
self.config, "inputmapstacks", "TDAY", "/inmaps/TDAY"
)
self.EPOT_mapstack = self.Dir + configget(
self.config, "inputmapstacks", "EPOT", "/inmaps/EPOT"
)
self.PRECIP_mapstack = self.Dir + configget(
self.config, "inputmapstacks", "PRECIP", "/inmaps/PRECIP"
)
self.RAD_mapstack = self.Dir + configget(
self.config, "inputmapstacks", "RAD", "/inmaps/RAD"
)
# self.WINDSPEED_mapstack=self.Dir + configget(self.config,"inputmapstacks","WINDSPEED","/inmaps/ClimatologyMapFiles/WINDS/WNDSPEED")
# self.AIRPRESS_mapstack=self.Dir + configget(self.config,"inputmapstacks","AIRPRESS","/inmaps/ClimatologyMapFiles/AIRPRESS/AIRPRESS")
self.ALBEDO_mapstack = self.Dir + configget(
self.config,
"inputmapstacks",
"ALBEDO",
"/inmaps/ClimatologyMapFiles/ALBEDO/ALBEDO",
)
self.WINDSPEED_mapstack = self.Dir + configget(
self.config, "inputmapstacks", "WINDSPEED", "/inmaps/WIND"
)
self.AIRPRESS_mapstack = self.Dir + configget(
self.config, "inputmapstacks", "AIRPRESS", "/inmaps/PRES"
)
self.Altitude = pcr.readmap(self.Dir + "/staticmaps/wflow_dem")
self.latitude = pcr.ycoordinate(pcr.boolean(self.Altitude))
# Add reading of parameters here
self.K_gw = self.wf_readmap(
os.path.join(self.Dir, "staticmaps/k_gw.map"), 0.0, fail=True
)
self.K_rout = self.wf_readmap(
os.path.join(self.Dir, "staticmaps/k_rout.map"), 0.0, fail=True
)
self.Sgref = self.wf_readmap(
os.path.join(self.Dir, "staticmaps/sgref.map"), 0.0, fail=True
)
self.alb_dry1 = self.wf_readmap(
os.path.join(self.Dir, "staticmaps/alb_dry.map"), 0.0, fail=True
)
self.alb_wet1 = self.wf_readmap(
os.path.join(self.Dir, "staticmaps/alb_wet.map"), 0.0, fail=True
)
self.beta1 = self.wf_readmap(
os.path.join(self.Dir, "staticmaps/beta.map"), 0.0, fail=True
)
self.cGsmax1 = self.wf_readmap(
os.path.join(self.Dir, "staticmaps/cgsmax.map"), 0.0, fail=True
)
self.ER_frac_ref1 = self.wf_readmap(
os.path.join(self.Dir, "staticmaps/er_frac_ref.map"), 0.0, fail=True
)
self.FdrainFC1 = self.wf_readmap(
os.path.join(self.Dir, "staticmaps/fdrainfc.map"), 0.0, fail=True
)
self.Fgw_conn1 = self.wf_readmap(
os.path.join(self.Dir, "staticmaps/fgw_conn.map"), 0.0, fail=True
)
self.Fhru1 = self.wf_readmap(
os.path.join(self.Dir, "staticmaps/fhru.map"), 0.0, fail=True
)
self.SLA1 = self.wf_readmap(
os.path.join(self.Dir, "staticmaps/sla.map"), 0.0, fail=True
)
self.LAIref1 = self.wf_readmap(
os.path.join(self.Dir, "staticmaps/lairef.map"), 0.0, fail=True
)
self.FsoilEmax1 = self.wf_readmap(
os.path.join(self.Dir, "staticmaps/fsoilemax.map"), 0.0, fail=True
)
self.fvegref_G1 = self.wf_readmap(
os.path.join(self.Dir, "staticmaps/fvegref_g.map"), 0.0, fail=True
)
self.FwaterE1 = self.wf_readmap(
os.path.join(self.Dir, "staticmaps/fwatere.map"), 0.0, fail=True
)
self.Gfrac_max1 = self.wf_readmap(
os.path.join(self.Dir, "staticmaps/gfrac_max.map"), 0.0, fail=True
)
self.hveg1 = self.wf_readmap(
os.path.join(self.Dir, "staticmaps/hveg.map"), 0.0, fail=True
)
self.InitLoss1 = self.wf_readmap(
os.path.join(self.Dir, "staticmaps/initloss.map"), 0.0, fail=True
)
self.LAImax1 = self.wf_readmap(
os.path.join(self.Dir, "staticmaps/laimax.map"), 0.0, fail=True
)
self.PrefR1 = self.wf_readmap(
os.path.join(self.Dir, "staticmaps/prefr.map"), 0.0, fail=True
)
self.S_sls1 = self.wf_readmap(
os.path.join(self.Dir, "staticmaps/s_sls.map"), 0.0, fail=True
)
self.S0FC1 = self.wf_readmap(
os.path.join(self.Dir, "staticmaps/s0fc.map"), 0.0, fail=True
)
self.SsFC1 = self.wf_readmap(
os.path.join(self.Dir, "staticmaps/ssfc.map"), 0.0, fail=True
)
self.SdFC1 = self.wf_readmap(
os.path.join(self.Dir, "staticmaps/sdfc.map"), 0.0, fail=True
)
self.Vc1 = self.wf_readmap(
os.path.join(self.Dir, "staticmaps/vc.map"), 0.0, fail=True
)
self.w0ref_alb1 = self.wf_readmap(
os.path.join(self.Dir, "staticmaps/w0ref_alb.map"), 0.0, fail=True
)
self.Us01 = self.wf_readmap(
os.path.join(self.Dir, "staticmaps/us0.map"), 0.0, fail=True
)
self.Ud01 = self.wf_readmap(
os.path.join(self.Dir, "staticmaps/ud0.map"), 0.0, fail=True
)
self.wslimU1 = self.wf_readmap(
os.path.join(self.Dir, "staticmaps/wslimu.map"), 0.0, fail=True
)
self.wdlimU1 = self.wf_readmap(
os.path.join(self.Dir, "staticmaps/wdlimu.map"), 0.0, fail=True
)
self.w0limE1 = self.wf_readmap(
os.path.join(self.Dir, "staticmaps/w0lime.map"), 0.0, fail=True
)
self.Tgrow1 = self.wf_readmap(
os.path.join(self.Dir, "staticmaps/tgrow.map"), 0.0, fail=True
)
self.Tsenc1 = self.wf_readmap(
os.path.join(self.Dir, "staticmaps/tsenc.map"), 0.0, fail=True
)
self.alb_dry2 = self.wf_readmap(
os.path.join(self.Dir, "staticmaps/alb_dry2.map"), 0.0, fail=True
)
self.alb_wet2 = self.wf_readmap(
os.path.join(self.Dir, "staticmaps/alb_wet2.map"), 0.0, fail=True
)
self.beta2 = self.wf_readmap(
os.path.join(self.Dir, "staticmaps/beta2.map"), 0.0, fail=True
)
self.cGsmax2 = self.wf_readmap(
os.path.join(self.Dir, "staticmaps/cgsmax2.map"), 0.0, fail=True
)
self.ER_frac_ref2 = self.wf_readmap(
os.path.join(self.Dir, "staticmaps/er_frac_ref2.map"), 0.0, fail=True
)
self.FdrainFC2 = self.wf_readmap(
os.path.join(self.Dir, "staticmaps/fdrainfc2.map"), 0.0, fail=True
)
self.Fgw_conn2 = self.wf_readmap(
os.path.join(self.Dir, "staticmaps/fgw_conn2.map"), 0.0, fail=True
)
self.Fhru2 = self.wf_readmap(
os.path.join(self.Dir, "staticmaps/fhru2.map"), 0.0, fail=True
)
self.SLA2 = self.wf_readmap(
os.path.join(self.Dir, "staticmaps/sla2.map"), 0.0, fail=True
)
self.LAIref2 = self.wf_readmap(
os.path.join(self.Dir, "staticmaps/lairef2.map"), 0.0, fail=True
)
self.FsoilEmax2 = self.wf_readmap(
os.path.join(self.Dir, "staticmaps/fsoilemax2.map"), 0.0, fail=True
)
self.fvegref_G2 = self.wf_readmap(
os.path.join(self.Dir, "staticmaps/fvegref_g2.map"), 0.0, fail=True
)
self.FwaterE2 = self.wf_readmap(
os.path.join(self.Dir, "staticmaps/fwatere2.map"), 0.0, fail=True
)
self.Gfrac_max2 = self.wf_readmap(
os.path.join(self.Dir, "staticmaps/gfrac_max2.map"), 0.0, fail=True
)
self.hveg2 = self.wf_readmap(
os.path.join(self.Dir, "staticmaps/hveg2.map"), 0.0, fail=True
)
self.InitLoss2 = self.wf_readmap(
os.path.join(self.Dir, "staticmaps/initloss2.map"), 0.0, fail=True
)
self.LAImax2 = self.wf_readmap(
os.path.join(self.Dir, "staticmaps/laimax2.map"), 0.0, fail=True
)
self.PrefR2 = self.wf_readmap(
os.path.join(self.Dir, "staticmaps/prefr2.map"), 0.0, fail=True
)
self.S_sls2 = self.wf_readmap(
os.path.join(self.Dir, "staticmaps/s_sls2.map"), 0.0, fail=True
)
self.S0FC2 = self.wf_readmap(
os.path.join(self.Dir, "staticmaps/s0fc2.map"), 0.0, fail=True
)
self.SsFC2 = self.wf_readmap(
os.path.join(self.Dir, "staticmaps/ssfc2.map"), 0.0, fail=True
)
self.SdFC2 = self.wf_readmap(
os.path.join(self.Dir, "staticmaps/sdfc2.map"), 0.0, fail=True
)
self.Vc2 = self.wf_readmap(
os.path.join(self.Dir, "staticmaps/vc2.map"), 0.0, fail=True
)
self.w0ref_alb2 = self.wf_readmap(
os.path.join(self.Dir, "staticmaps/w0ref_alb2.map"), 0.0, fail=True
)
self.Us02 = self.wf_readmap(
os.path.join(self.Dir, "staticmaps/us02.map"), 0.0, fail=True
)
self.Ud02 = self.wf_readmap(
os.path.join(self.Dir, "staticmaps/ud02.map"), 0.0, fail=True
)
self.wslimU2 = self.wf_readmap(
os.path.join(self.Dir, "staticmaps/wslimu2.map"), 0.0, fail=True
)
self.wdlimU2 = self.wf_readmap(
os.path.join(self.Dir, "staticmaps/wdlimu2.map"), 0.0, fail=True
)
self.w0limE2 = self.wf_readmap(
os.path.join(self.Dir, "staticmaps/w0lime2.map"), 0.0, fail=True
)
self.Tgrow2 = self.wf_readmap(
os.path.join(self.Dir, "staticmaps/tgrow2.map"), 0.0, fail=True
)
self.Tsenc2 = self.wf_readmap(
os.path.join(self.Dir, "staticmaps/tsenc2.map"), 0.0, fail=True
)
self.wf_multparameters()
# Static, for the computation of Aerodynamic conductance (3.7)
self.fh1 = pcr.ln(813.0 / self.hveg1 - 5.45)
self.fh2 = pcr.ln(813.0 / self.hveg2 - 5.45)
self.ku2_1 = 0.305 / (self.fh1 * (self.fh1 + 2.3))
self.ku2_2 = 0.305 / (self.fh2 * (self.fh2 + 2.3))
self.logger.info("Starting Dynamic run...")
def integralLogisticFunction(self,x): #-returns a tupple of two values holding the integral of the logistic functions # of (x) and (-x) logInt=pcr.ln(pcr.exp(-x)+1) return logInt,x+logInt