def file_browser(username, root_wf_id, wf_id):
try:
dashboard = Dashboard(g.master_db_url, root_wf_id, wf_id=wf_id)
details = dashboard.get_workflow_details(wf_id)
submit_dir = details.submit_dir
if os.path.isdir(submit_dir):
init_file = request.args.get("init_file", None)
return render_template(
"file-browser.html",
root_wf_id=root_wf_id,
wf_id=wf_id,
init_file=init_file,
)
else:
raise ServiceError(
ErrorResponse(
"SUBMIT_DIR_NOT_FOUND",
"%r is not a valid directory" % str(submit_dir),
))
except NoResultFound:
return render_template("error/workflow/workflow_details_missing.html")
return "Error", 500
def file_view(username, root_wf_id, wf_id, path):
try:
dashboard = Dashboard(g.master_db_url, root_wf_id, wf_id=wf_id)
details = dashboard.get_workflow_details(wf_id)
submit_dir = details.submit_dir
file_path = os.path.join(submit_dir, path)
if not os.path.isfile(file_path):
return "File not found", 404
return send_from_directory(submit_dir, path)
except NoResultFound:
return render_template("error/workflow/workflow_details_missing.html")
return "Error", 500
def file_list(username, root_wf_id, wf_id, path=""):
try:
dashboard = Dashboard(g.master_db_url, root_wf_id, wf_id=wf_id)
details = dashboard.get_workflow_details(wf_id)
submit_dir = details.submit_dir
if os.path.isdir(submit_dir):
dest = os.path.join(submit_dir, path)
if os.path.isfile(dest):
return "", 204
folders = {"dirs": [], "files": []}
for entry in os.listdir(dest):
if os.path.isdir(os.path.join(dest, entry)):
folders["dirs"].append(
os.path.normpath(os.path.join(path, entry)))
else:
folders["files"].append(
os.path.normpath(os.path.join(path, entry)))
return serialize(folders), 200, {
"Content-Type": "application/json"
}
else:
raise ServiceError(
ErrorResponse(
"SUBMIT_DIR_NOT_FOUND",
"%r is not a valid directory" % str(submit_dir),
))
except NoResultFound:
return render_template("error/workflow/workflow_details_missing.html")
return "Error", 500