Exemplo n.º 1
0
 def test_bigread(self):
     rdr = NewickReader()
     t1 = rdr.read(BIG_TREE_FILE)
     t1._validate()
     t1._dump()
     assert (t1.count_nodes() == 182)
     assert (t1.count_branches() == 181)
Exemplo n.º 2
0
def test_annotated_tree():
    rdr = NewickReader({'node_annotations': True})
    t1 = rdr.read(ANN_TREE_FILE)
    t1._validate()
    t1._dump()
    assert (t1.count_nodes() == 182)
    assert (t1.count_branches() == 181)


### END ####################################################################
Exemplo n.º 3
0
 def test_big2(self):
     rdr = NewickReader({'node_annotations': True})
     t1 = rdr.read(BIG_TREE_2_FILE)
     t1._validate()
     t1._dump()