def paint_spectrogram(self):
"""
Function that paints the spectrogram within the main interface and links the interactivity with the main canvas.
"""
if (self.x1 <= 0) or (self.x2 >= len(self.active_trace.data)):
gui_functions.msg_box(
"No active window is selected",
"Please, select one point the trace and drag along the time axis."
)
else:
if self.ax1 is not None:
self.ax1.cla()
self.figura_spectrograma.clf()
signal = self.active_trace.data
valor = np.asarray([self.x1, self.x2]) * self.fm
chunkPlot = signal[int(valor[0]):int(valor[1])]
self.ax1 = self.figura_spectrograma.add_subplot(111)
self.ax1.cla()
self.ax1.specgram(chunkPlot.flatten(),
NFFT=128,
Fs=self.fm,
noverlap=64,
cmap='jet')
self.ax1.set_ylim(0, 30)
self.canvas_specgram.draw()
def submit_current_window(self):
"""
This function is used to submit the current window to the segmentation table to store the segmented events
in the datasets.
"""
# check which radio button is selected
if self.current_label == "":
gui_functions.msg_box("Can not submit if no label is selected",
"Please, select one or change window.")
else:
# Get the current information from the data
label = self.current_label
alumni = self.comments.text()
slider = self.qualityslider.value()
start, end = str(round(self.x1, 2)), str(round(self.x2, 2))
peakAmpl = str(round(self.peak_to_peak(), 2))
duration = str(abs(float(end) - float(start)))
# Check if is overlapping or not.
if self.check_overlapping(round(self.x1, 2), round(self.x2, 2)):
gui_functions.msg_box("Current window overlap previous one",
"Please, move the sliding window.")
else:
currentRowCount = self.table_trace.rowCount()
self.table_trace.insertRow(currentRowCount)
self.table_trace.setItem(currentRowCount, 0,
QtGui.QTableWidgetItem(start))
self.table_trace.setItem(currentRowCount, 1,
QtGui.QTableWidgetItem(end))
self.table_trace.setItem(currentRowCount, 2,
QtGui.QTableWidgetItem(label))
self.table_trace.setItem(currentRowCount, 3,
QtGui.QTableWidgetItem(peakAmpl))
self.table_trace.setItem(currentRowCount, 4,
QtGui.QTableWidgetItem(duration))
self.table_trace.setItem(currentRowCount, 5,
QtGui.QTableWidgetItem(str(slider)))
self.table_trace.setItem(currentRowCount, 6,
QtGui.QTableWidgetItem(alumni))
# now we add the last xticks window
self.first_ticked = start
self.last_ticked = end
# cleaning and redrawing traces.
new_job = multiprocessing.Process(target=self.clean_figures(),
args=())
new_job.start()
redraw = multiprocessing.Process(target=self.redraw_trace(),
args=())
redraw.start()
time.sleep(2)
gc.collect()
def submit_current_trace(self):
"""Function to save the segmented events in a pickle file. Notice that if no segmented events are selected,
the data can not be saved.
"""
allRows = self.table_trace.rowCount()
if self.ax is None or allRows is 0:
gui_functions.msg_box("No current events are segmented",
"Data can not be submitted")
else:
segmentation_table = []
segmentation_table.append((self.start_data, self.end_data))
for row in xrange(0, allRows):
start_toSave = str(self.table_trace.item(row, 0).text())
end_toSave = str(self.table_trace.item(row, 1).text())
label_toSave = str(self.table_trace.item(row, 2).text())
peak_toSave = str(self.table_trace.item(row, 3).text())
duration_toSave = str(self.table_trace.item(row, 4).text())
slides_toSave = str(self.table_trace.item(row, 5).text())
alumni_toSave = str(self.table_trace.item(row, 6).text())
# Created the segmentation table
new = [
start_toSave, end_toSave, label_toSave, peak_toSave,
duration_toSave, slides_toSave, alumni_toSave
]
segmentation_table.append(new)
self.toSave = "%s_%s_%s_%s_%s_%s_%s" % (
self.network, self.station, self.channel, self.location,
self.start_data.year, self.day_of_the_year, self.duration)
self.segmentation_table = segmentation_table
# Clean the figures to free memory and allow further plotting.
self.clean_table()
self.clean_figures()
self.clean_points()
self.figura_traza.clf()
self.canvas_traza.draw()
self.show_save_menu()
gc.collect()
def paint_fft(self):
"""
This function computes the FFT of the selected signal and plot it on the selected space for it.
"""
if (self.x1 <= 0) or (self.x2 >= len(self.active_trace.data)):
gui_functions.msg_box(
"No active window is selected",
"Please, select one point the trace and drag along the time axis."
)
else:
if self.ax2 is not None:
self.ax2.cla()
signal = self.active_trace.data
value = np.asarray([self.x1, self.x2]) * self.fm
selected = signal[int(value[0]):int(value[1])]
# Check it with the masked arrays on some volcanoes.
if np.ma.isMaskedArray(selected):
xi = np.arange(len(selected))
mask = np.isfinite(selected)
selected = np.interp(xi, xi[mask], selected[mask])
y, frq = picos_utils.compute_fft(selected, self.fm)
self.ax2 = self.figura_fft.add_subplot(111)
self.ax2.cla()
self.ax2.set_xlabel('Freq (Hz)')
if self.loglogaxis.isChecked():
self.ax2.set_ylabel('log(|Y(freq)|)')
self.ax2.semilogy(frq[1:], np.abs(y)[1:], 'r')
self.canvas_fft.draw()
else:
self.ax2.set_ylabel('|Y(freq)|')
self.ax2.plot(frq[1:], abs(y)[1:], 'r')
self.ax2.set_xlim(0, 20)
self.canvas_fft.draw()