========
Planemo is a set of utilities for developing Galaxy tools. Each utility is
implemented as a subcommand of the ``planemo`` executable. This section of the
documentation describes these commands.
"""
command_doc_dir = os.path.join("docs", "commands")
commands = COMMANDS_TEMPLATE
for command in list_cmds():
if command in INTERNAL_COMMANDS:
continue
command_obj = cli.name_to_command(command)
function = command_obj.callback
raw_rst = function.__doc__
def clean_rst_line(line):
if line.startswith(" "):
return line[4:]
else:
return line
clean_rst = "\n".join(map(clean_rst_line, raw_rst.split("\n")))
result = runner.invoke(planemo_cli, [command, "--help"])
output = result.output
lines = output.split("\n")
new_lines = []
========
Planemo is a set of utilities for developing Galaxy tools. Each utility is
implemented as a subcommand of the ``planemo`` executable. This section of the
documentation describes these commands.
"""
command_doc_dir = os.path.join("docs", "commands")
commands = COMMANDS_TEMPLATE
for command in list_cmds():
if command in INTERNAL_COMMANDS:
continue
command_obj = cli.name_to_command(command)
function = command_obj.callback
raw_rst = function.__doc__
def clean_rst_line(line):
# Check for that click \b.
if line.startswith(' \x08'):
return "::\n"
if line.startswith(" "):
return line[4:]
else:
return line
all_lines = raw_rst.split("\n")
all_lines[0] = all_lines[0].lstrip() # """ Fix docs like this.
clean_rst = "\n".join(map(clean_rst_line, all_lines))