def __init__(self, parent):
self.parent = parent
# dictionnary linking checkBox to measuring function
self.dicNetAnalysis = {
self.parent.gui.gbAssort.title(): get_assortativity,
self.parent.gui.gbClustering.title(): get_clustering,
self.parent.gui.gbReciprocity.title(): get_reciprocity,
self.parent.gui.gbConnectComp.title(): get_num_scc,
"Weak CC": get_num_wcc,
self.parent.gui.gbDiameter.title(): get_diameter,
self.parent.gui.gbSpectrum.title(): get_spectral_radius,
}
"""# dic linking the weight generator
self.dicWeightsType = { "Gaussian": self.setGaussWeights,
"Lognormal": self.setLogNormWeights}"""
# la base (les attributs de l'instance)
self.dicProperties = {}
self.plottingWidget = PlotWidget()
def __init__(self, parent=None):
super(Plotter_LC, self).__init__(parent)
self.tixi = Tixi()
self.tixi.open(Config.path_cpacs_lc_ref)
self.buttonBox = QtGui.QDialogButtonBox()
self.buttonBox.addButton(QtGui.QDialogButtonBox.Ok)
self.buttonBox.addButton(QtGui.QDialogButtonBox.Reset)
self.buttonBox.addButton(QtGui.QDialogButtonBox.Cancel)
self.plot_widget = PlotWidget("LC")
self.comboBoxLoadCases = QtGui.QComboBox()
self.fillComboBoxLoadCases()
self.fire_LoadCaseChanged(0)
self.grid = QtGui.QGridLayout()
self.grid.addWidget(self.comboBoxLoadCases, 0,0)
self.grid.addWidget(self.plot_widget, 1, 0)
# set the layout
layout = QtGui.QGridLayout()
layout.addLayout(self.grid, 0,0,1,3)
layout.addWidget(self.buttonBox, 5, 0, 1,3)
widget = QtGui.QWidget()
widget.setLayout(layout)
self.setCentralWidget(widget)
# ===============================================================================================
# actions
# ===============================================================================================
self.comboBoxLoadCases.currentIndexChanged.connect(self.fire_LoadCaseChanged)
self.buttonBox.button(QtGui.QDialogButtonBox.Ok).clicked.connect(self.close)
self.buttonBox.button(QtGui.QDialogButtonBox.Reset).clicked.connect(self.close)
self.buttonBox.button(QtGui.QDialogButtonBox.Cancel).clicked.connect(self.close)
def setupUi(self, MainWindow):
MainWindow.setObjectName("MainWindow")
MainWindow.resize(1313, 875)
icon = QtGui.QIcon()
icon.addPixmap(QtGui.QPixmap(":/images/jderobot.png"), QtGui.QIcon.Normal, QtGui.QIcon.Off)
MainWindow.setWindowIcon(icon)
self.centralwidget = QtWidgets.QWidget(MainWindow)
self.centralwidget.setObjectName("centralwidget")
self.verticalLayoutWidget = QtWidgets.QWidget(self.centralwidget)
self.verticalLayoutWidget.setGeometry(QtCore.QRect(30, 680, 161, 121))
self.verticalLayoutWidget.setObjectName("verticalLayoutWidget")
self.logoLayout = QtWidgets.QVBoxLayout(self.verticalLayoutWidget)
self.logoLayout.setContentsMargins(0, 0, 0, 0)
self.logoLayout.setObjectName("logoLayout")
self.playpause = QtWidgets.QPushButton(self.centralwidget)
self.playpause.setGeometry(QtCore.QRect(310, 300, 151, 51))
font = QtGui.QFont()
font.setPointSize(16)
font.setBold(True)
font.setWeight(75)
self.playpause.setFont(font)
self.playpause.setCheckable(True)
self.playpause.setChecked(False)
self.playpause.setObjectName("playpause")
self.plot = PlotWidget(self.centralwidget)
self.plot.setGeometry(QtCore.QRect(710, 30, 571, 571))
self.plot.setObjectName("plot")
self.progressBar = QtWidgets.QProgressBar(self.centralwidget)
self.progressBar.setGeometry(QtCore.QRect(740, 680, 541, 23))
self.progressBar.setProperty("value", 0)
self.progressBar.setObjectName("progressBar")
self.orig_img = QtWidgets.QLabel(self.centralwidget)
self.orig_img.setGeometry(QtCore.QRect(40, 30, 320, 240))
self.orig_img.setObjectName("orig_img")
self.processed_img = QtWidgets.QLabel(self.centralwidget)
self.processed_img.setGeometry(QtCore.QRect(380, 30, 320, 240))
self.processed_img.setObjectName("processed_img")
self.mean = QtWidgets.QLCDNumber(self.centralwidget)
self.mean.setGeometry(QtCore.QRect(190, 430, 141, 51))
self.mean.setObjectName("mean")
self.median = QtWidgets.QLCDNumber(self.centralwidget)
self.median.setGeometry(QtCore.QRect(190, 500, 141, 51))
self.median.setObjectName("median")
self.Std_dev = QtWidgets.QLCDNumber(self.centralwidget)
self.Std_dev.setGeometry(QtCore.QRect(190, 580, 141, 51))
self.Std_dev.setObjectName("Std_dev")
self.rmse = QtWidgets.QLCDNumber(self.centralwidget)
self.rmse.setGeometry(QtCore.QRect(530, 430, 141, 51))
self.rmse.setObjectName("rmse")
self.label = QtWidgets.QLabel(self.centralwidget)
self.label.setGeometry(QtCore.QRect(240, 380, 311, 31))
font = QtGui.QFont()
font.setPointSize(16)
font.setBold(False)
font.setItalic(True)
font.setUnderline(True)
font.setWeight(50)
self.label.setFont(font)
self.label.setObjectName("label")
self.label_3 = QtWidgets.QLabel(self.centralwidget)
self.label_3.setGeometry(QtCore.QRect(10, 440, 141, 20))
font = QtGui.QFont()
font.setPointSize(14)
font.setBold(True)
font.setWeight(75)
font.setKerning(True)
self.label_3.setFont(font)
self.label_3.setObjectName("label_3")
self.label_4 = QtWidgets.QLabel(self.centralwidget)
self.label_4.setGeometry(QtCore.QRect(10, 510, 141, 20))
font = QtGui.QFont()
font.setPointSize(14)
font.setBold(True)
font.setWeight(75)
font.setKerning(True)
self.label_4.setFont(font)
self.label_4.setObjectName("label_4")
self.label_5 = QtWidgets.QLabel(self.centralwidget)
self.label_5.setGeometry(QtCore.QRect(10, 590, 171, 20))
font = QtGui.QFont()
font.setPointSize(14)
font.setBold(True)
font.setWeight(75)
font.setKerning(True)
self.label_5.setFont(font)
self.label_5.setObjectName("label_5")
self.label_6 = QtWidgets.QLabel(self.centralwidget)
self.label_6.setGeometry(QtCore.QRect(400, 440, 101, 20))
font = QtGui.QFont()
font.setPointSize(14)
font.setBold(True)
font.setWeight(75)
font.setKerning(True)
self.label_6.setFont(font)
self.label_6.setObjectName("label_6")
self.label_7 = QtWidgets.QLabel(self.centralwidget)
self.label_7.setGeometry(QtCore.QRect(570, 680, 161, 31))
font = QtGui.QFont()
font.setPointSize(18)
self.label_7.setFont(font)
self.label_7.setObjectName("label_7")
self.realtime = QtWidgets.QLCDNumber(self.centralwidget)
self.realtime.setGeometry(QtCore.QRect(530, 530, 141, 51))
self.realtime.setObjectName("realtime")
self.label_8 = QtWidgets.QLabel(self.centralwidget)
self.label_8.setGeometry(QtCore.QRect(390, 540, 131, 31))
font = QtGui.QFont()
font.setPointSize(15)
font.setBold(True)
font.setWeight(75)
self.label_8.setFont(font)
self.label_8.setObjectName("label_8")
self.line = QtWidgets.QFrame(self.centralwidget)
self.line.setGeometry(QtCore.QRect(350, 500, 361, 20))
self.line.setFrameShape(QtWidgets.QFrame.HLine)
self.line.setFrameShadow(QtWidgets.QFrame.Sunken)
self.line.setObjectName("line")
self.line_2 = QtWidgets.QFrame(self.centralwidget)
self.line_2.setGeometry(QtCore.QRect(-10, 360, 721, 20))
self.line_2.setFrameShape(QtWidgets.QFrame.HLine)
self.line_2.setFrameShadow(QtWidgets.QFrame.Sunken)
self.line_2.setObjectName("line_2")
self.line_3 = QtWidgets.QFrame(self.centralwidget)
self.line_3.setGeometry(QtCore.QRect(342, 510, 21, 161))
self.line_3.setFrameShape(QtWidgets.QFrame.VLine)
self.line_3.setFrameShadow(QtWidgets.QFrame.Sunken)
self.line_3.setObjectName("line_3")
self.line_4 = QtWidgets.QFrame(self.centralwidget)
self.line_4.setGeometry(QtCore.QRect(-3, 660, 361, 20))
self.line_4.setFrameShape(QtWidgets.QFrame.HLine)
self.line_4.setFrameShadow(QtWidgets.QFrame.Sunken)
self.line_4.setObjectName("line_4")
self.line_5 = QtWidgets.QFrame(self.centralwidget)
self.line_5.setGeometry(QtCore.QRect(350, 590, 361, 20))
self.line_5.setFrameShape(QtWidgets.QFrame.HLine)
self.line_5.setFrameShadow(QtWidgets.QFrame.Sunken)
self.line_5.setObjectName("line_5")
self.label_9 = QtWidgets.QLabel(self.centralwidget)
self.label_9.setGeometry(QtCore.QRect(120, 0, 131, 21))
font = QtGui.QFont()
font.setBold(True)
font.setWeight(75)
self.label_9.setFont(font)
self.label_9.setObjectName("label_9")
self.label_10 = QtWidgets.QLabel(self.centralwidget)
self.label_10.setGeometry(QtCore.QRect(440, 0, 151, 21))
font = QtGui.QFont()
font.setBold(True)
font.setWeight(75)
self.label_10.setFont(font)
self.label_10.setObjectName("label_10")
MainWindow.setCentralWidget(self.centralwidget)
self.menubar = QtWidgets.QMenuBar(MainWindow)
self.menubar.setGeometry(QtCore.QRect(0, 0, 1313, 27))
self.menubar.setObjectName("menubar")
MainWindow.setMenuBar(self.menubar)
self.statusbar = QtWidgets.QStatusBar(MainWindow)
self.statusbar.setObjectName("statusbar")
MainWindow.setStatusBar(self.statusbar)
self.toolBar = QtWidgets.QToolBar(MainWindow)
self.toolBar.setObjectName("toolBar")
MainWindow.addToolBar(QtCore.Qt.TopToolBarArea, self.toolBar)
self.retranslateUi(MainWindow)
QtCore.QMetaObject.connectSlotsByName(MainWindow)
class Plotter_LC(QtGui.QMainWindow):
def __init__(self, parent=None):
super(Plotter_LC, self).__init__(parent)
self.tixi = Tixi()
self.tixi.open(Config.path_cpacs_lc_ref)
self.buttonBox = QtGui.QDialogButtonBox()
self.buttonBox.addButton(QtGui.QDialogButtonBox.Ok)
self.buttonBox.addButton(QtGui.QDialogButtonBox.Reset)
self.buttonBox.addButton(QtGui.QDialogButtonBox.Cancel)
self.plot_widget = PlotWidget("LC")
self.comboBoxLoadCases = QtGui.QComboBox()
self.fillComboBoxLoadCases()
self.fire_LoadCaseChanged(0)
self.grid = QtGui.QGridLayout()
self.grid.addWidget(self.comboBoxLoadCases, 0,0)
self.grid.addWidget(self.plot_widget, 1, 0)
# set the layout
layout = QtGui.QGridLayout()
layout.addLayout(self.grid, 0,0,1,3)
layout.addWidget(self.buttonBox, 5, 0, 1,3)
widget = QtGui.QWidget()
widget.setLayout(layout)
self.setCentralWidget(widget)
# ===============================================================================================
# actions
# ===============================================================================================
self.comboBoxLoadCases.currentIndexChanged.connect(self.fire_LoadCaseChanged)
self.buttonBox.button(QtGui.QDialogButtonBox.Ok).clicked.connect(self.close)
self.buttonBox.button(QtGui.QDialogButtonBox.Reset).clicked.connect(self.close)
self.buttonBox.button(QtGui.QDialogButtonBox.Cancel).clicked.connect(self.close)
def fire_LoadCaseChanged(self, idx):
uid = self.comboBoxLoadCases.currentText()
path = '/cpacs/vehicles/aircraft/model[1]/analyses/loadAnalysis/loadCases/flightLoadCase[@uID="' + uid + '"]'
x_axis, y_axis = self.getPlotPointValues(path)
self.plot_widget.plot.clear()
self.plot_widget.plot.grid(True)
self.plot_widget.simplePlot(x_axis, y_axis)
def fillComboBoxLoadCases(self):
path_lc = "/cpacs/vehicles/aircraft/model[1]/analyses/loadAnalysis/loadCases"
for idx_lc in range(1, self.tixi.getNumberOfChilds(path_lc) + 1) :
tmp_path = path_lc + "/flightLoadCase[" + str(idx_lc) + "]"
self.comboBoxLoadCases.addItem( self.tixi.getTextAttribute(tmp_path,"uID") )
def getPlotPointValues(self, path):
"""...
Args:
path (String): path to specific flightLoadCase
Returns:
...
"""
xaxis = []
yaxis = []
path_wings = path + "/aeroLoads/wings"
for idx_wing in range(1, self.tixi.getNumberOfChilds(path_wings) + 1) :
path_segs = path_wings + "/wing[" + str(idx_wing) + "]/segments"
for idx_seg in range(1, self.tixi.getNumberOfChilds(path_segs) + 1) :
for idx_strip in range(1, self.tixi.getNamedChildrenCount(path_segs + "/segment[" + str(idx_seg) + "]", "strip") + 1) :
x = self.tixi.getDoubleElement(path_segs + "/segment[" + str(idx_seg) + "]/strip[" + str(idx_strip) + "]/reference/point/x")
y = self.tixi.getDoubleElement(path_segs + "/segment[" + str(idx_seg) + "]/strip[" + str(idx_strip) + "]/reference/point/y")
xaxis.append(x)
yaxis.append(y)
return xaxis, yaxis
def setupUi(self, MainWindow):
MainWindow.setObjectName("MainWindow")
MainWindow.resize(1347, 904)
icon = QtGui.QIcon()
icon.addPixmap(QtGui.QPixmap(":/images/jderobot.png"), QtGui.QIcon.Normal, QtGui.QIcon.Off)
MainWindow.setWindowIcon(icon)
self.centralwidget = QtWidgets.QWidget(MainWindow)
self.centralwidget.setObjectName("centralwidget")
self.verticalLayoutWidget = QtWidgets.QWidget(self.centralwidget)
self.verticalLayoutWidget.setGeometry(QtCore.QRect(30, 680, 171, 141))
self.verticalLayoutWidget.setObjectName("verticalLayoutWidget")
self.logoLayout = QtWidgets.QVBoxLayout(self.verticalLayoutWidget)
self.logoLayout.setContentsMargins(0, 0, 0, 0)
self.logoLayout.setObjectName("logoLayout")
self.playpause = QtWidgets.QPushButton(self.centralwidget)
self.playpause.setGeometry(QtCore.QRect(260, 300, 201, 51))
font = QtGui.QFont()
font.setPointSize(16)
font.setBold(True)
font.setWeight(75)
self.playpause.setFont(font)
self.playpause.setCheckable(True)
self.playpause.setChecked(False)
self.playpause.setObjectName("playpause")
self.plot = PlotWidget(self.centralwidget)
self.plot.setGeometry(QtCore.QRect(710, 30, 621, 571))
self.plot.setObjectName("plot")
self.progressBar = QtWidgets.QProgressBar(self.centralwidget)
self.progressBar.setGeometry(QtCore.QRect(740, 680, 541, 23))
self.progressBar.setProperty("value", 0)
self.progressBar.setObjectName("progressBar")
self.orig_img = QtWidgets.QLabel(self.centralwidget)
self.orig_img.setGeometry(QtCore.QRect(40, 30, 320, 240))
self.orig_img.setObjectName("orig_img")
self.processed_img = QtWidgets.QLabel(self.centralwidget)
self.processed_img.setGeometry(QtCore.QRect(380, 30, 320, 240))
self.processed_img.setObjectName("processed_img")
self.mean = QtWidgets.QLCDNumber(self.centralwidget)
self.mean.setGeometry(QtCore.QRect(190, 430, 141, 51))
self.mean.setObjectName("mean")
self.median = QtWidgets.QLCDNumber(self.centralwidget)
self.median.setGeometry(QtCore.QRect(190, 500, 141, 51))
self.median.setObjectName("median")
self.Std_dev = QtWidgets.QLCDNumber(self.centralwidget)
self.Std_dev.setGeometry(QtCore.QRect(190, 580, 141, 51))
self.Std_dev.setObjectName("Std_dev")
self.rmse = QtWidgets.QLCDNumber(self.centralwidget)
self.rmse.setGeometry(QtCore.QRect(530, 430, 141, 51))
self.rmse.setObjectName("rmse")
self.label = QtWidgets.QLabel(self.centralwidget)
self.label.setGeometry(QtCore.QRect(160, 380, 421, 31))
font = QtGui.QFont()
font.setPointSize(16)
font.setBold(False)
font.setItalic(True)
font.setUnderline(True)
font.setWeight(50)
self.label.setFont(font)
self.label.setObjectName("label")
self.label_3 = QtWidgets.QLabel(self.centralwidget)
self.label_3.setGeometry(QtCore.QRect(10, 440, 141, 20))
font = QtGui.QFont()
font.setPointSize(14)
font.setBold(True)
font.setWeight(75)
font.setKerning(True)
self.label_3.setFont(font)
self.label_3.setObjectName("label_3")
self.label_4 = QtWidgets.QLabel(self.centralwidget)
self.label_4.setGeometry(QtCore.QRect(10, 510, 141, 20))
font = QtGui.QFont()
font.setPointSize(14)
font.setBold(True)
font.setWeight(75)
font.setKerning(True)
self.label_4.setFont(font)
self.label_4.setObjectName("label_4")
self.label_5 = QtWidgets.QLabel(self.centralwidget)
self.label_5.setGeometry(QtCore.QRect(0, 590, 191, 20))
font = QtGui.QFont()
font.setPointSize(14)
font.setBold(True)
font.setWeight(75)
font.setKerning(True)
self.label_5.setFont(font)
self.label_5.setObjectName("label_5")
self.label_6 = QtWidgets.QLabel(self.centralwidget)
self.label_6.setGeometry(QtCore.QRect(400, 440, 101, 20))
font = QtGui.QFont()
font.setPointSize(14)
font.setBold(True)
font.setWeight(75)
font.setKerning(True)
self.label_6.setFont(font)
self.label_6.setObjectName("label_6")
self.label_7 = QtWidgets.QLabel(self.centralwidget)
self.label_7.setGeometry(QtCore.QRect(570, 680, 161, 31))
font = QtGui.QFont()
font.setPointSize(18)
self.label_7.setFont(font)
self.label_7.setObjectName("label_7")
self.realtime = QtWidgets.QLCDNumber(self.centralwidget)
self.realtime.setGeometry(QtCore.QRect(530, 530, 141, 51))
self.realtime.setObjectName("realtime")
self.label_8 = QtWidgets.QLabel(self.centralwidget)
self.label_8.setGeometry(QtCore.QRect(370, 540, 141, 31))
font = QtGui.QFont()
font.setPointSize(15)
font.setBold(True)
font.setWeight(75)
self.label_8.setFont(font)
self.label_8.setObjectName("label_8")
self.line = QtWidgets.QFrame(self.centralwidget)
self.line.setGeometry(QtCore.QRect(350, 500, 361, 20))
self.line.setFrameShape(QtWidgets.QFrame.HLine)
self.line.setFrameShadow(QtWidgets.QFrame.Sunken)
self.line.setObjectName("line")
self.line_2 = QtWidgets.QFrame(self.centralwidget)
self.line_2.setGeometry(QtCore.QRect(-10, 360, 721, 20))
self.line_2.setFrameShape(QtWidgets.QFrame.HLine)
self.line_2.setFrameShadow(QtWidgets.QFrame.Sunken)
self.line_2.setObjectName("line_2")
self.line_3 = QtWidgets.QFrame(self.centralwidget)
self.line_3.setGeometry(QtCore.QRect(342, 510, 21, 161))
self.line_3.setFrameShape(QtWidgets.QFrame.VLine)
self.line_3.setFrameShadow(QtWidgets.QFrame.Sunken)
self.line_3.setObjectName("line_3")
self.line_4 = QtWidgets.QFrame(self.centralwidget)
self.line_4.setGeometry(QtCore.QRect(-3, 660, 361, 20))
self.line_4.setFrameShape(QtWidgets.QFrame.HLine)
self.line_4.setFrameShadow(QtWidgets.QFrame.Sunken)
self.line_4.setObjectName("line_4")
self.line_5 = QtWidgets.QFrame(self.centralwidget)
self.line_5.setGeometry(QtCore.QRect(350, 590, 361, 20))
self.line_5.setFrameShape(QtWidgets.QFrame.HLine)
self.line_5.setFrameShadow(QtWidgets.QFrame.Sunken)
self.line_5.setObjectName("line_5")
self.label_9 = QtWidgets.QLabel(self.centralwidget)
self.label_9.setGeometry(QtCore.QRect(120, 0, 131, 31))
font = QtGui.QFont()
font.setBold(True)
font.setWeight(75)
self.label_9.setFont(font)
self.label_9.setObjectName("label_9")
self.label_10 = QtWidgets.QLabel(self.centralwidget)
self.label_10.setGeometry(QtCore.QRect(440, 0, 181, 31))
font = QtGui.QFont()
font.setBold(True)
font.setWeight(75)
self.label_10.setFont(font)
self.label_10.setObjectName("label_10")
MainWindow.setCentralWidget(self.centralwidget)
self.menubar = QtWidgets.QMenuBar(MainWindow)
self.menubar.setGeometry(QtCore.QRect(0, 0, 1347, 32))
self.menubar.setObjectName("menubar")
MainWindow.setMenuBar(self.menubar)
self.statusbar = QtWidgets.QStatusBar(MainWindow)
self.statusbar.setObjectName("statusbar")
MainWindow.setStatusBar(self.statusbar)
self.toolBar = QtWidgets.QToolBar(MainWindow)
self.toolBar.setObjectName("toolBar")
MainWindow.addToolBar(QtCore.Qt.TopToolBarArea, self.toolBar)
self.retranslateUi(MainWindow)
QtCore.QMetaObject.connectSlotsByName(MainWindow)
class GraphAnalyzer:
def __init__(self, parent):
self.parent = parent
# dictionnary linking checkBox to measuring function
self.dicNetAnalysis = {
self.parent.gui.gbAssort.title(): get_assortativity,
self.parent.gui.gbClustering.title(): get_clustering,
self.parent.gui.gbReciprocity.title(): get_reciprocity,
self.parent.gui.gbConnectComp.title(): get_num_scc,
"Weak CC": get_num_wcc,
self.parent.gui.gbDiameter.title(): get_diameter,
self.parent.gui.gbSpectrum.title(): get_spectral_radius,
}
"""# dic linking the weight generator
self.dicWeightsType = { "Gaussian": self.setGaussWeights,
"Lognormal": self.setLogNormWeights}"""
# la base (les attributs de l'instance)
self.dicProperties = {}
self.plottingWidget = PlotWidget()
# ~ self.updateProgress = QtCore.Signal(int)
# ---------------#
# set functions #
# ---------------#
def setDicPropGraphEvol(self, strEvolProp, currentValProp):
self.reset_dic_properties()
self.dicProperties["Type"] = self.parent.gui.cbNetTypeEvol.currentText()
self.dicProperties["InhibFrac"] = self.parent.gui.dsbInhibFracEvol.value()
if self.parent.gui.checkBoxNodesEvol.isChecked():
self.dicProperties["Nodes"] = self.parent.gui.sbNodesEvol.value()
if self.parent.gui.checkBoxEdgesEvol.isChecked():
self.dicProperties["Edges"] = self.parent.gui.sbEdgesEvol.value()
if self.parent.gui.checkBoxDensityEvol.isChecked():
self.dicProperties["Density"] = self.parent.gui.dsbDensityEvol.value()
if self.parent.gui.cbNetTypeEvol.currentText() == "Free-scale":
self.dicProperties["InDeg"] = self.parent.gui.dsbInDegExpEvol.value()
self.dicProperties["OutDeg"] = self.parent.gui.dsbOutDegExpEvol.value()
self.dicProperties["Reciprocity"] = self.parent.gui.dsbRecipEvol.value()
if self.parent.gui.cbNetTypeEvol.currentText() == "EDR":
self.dicProperties["Lambda"] = self.parent.gui.dsbLambdaEvol.value()
self.dicProperties["Rho"] = self.parent.gui.sbNeuronDensEvol.value()
strName = ""
# pour le moment on s'occupe pas des poids
self.dicProperties["Weighted"] = False
if self.parent.gui.gbGraphName.isChecked():
strName = self.dicProperties["Type"] + "_"
for string in self.dicProperties.keys():
if string != "Type":
strName += string[0] + str(self.dicProperties[string])
self.dicProperties["Name"] = strName
self.dicProperties[strEvolProp] = currentValProp
def reset_dic_properties(self):
self.dicProperties = {}
##################
# get functions
def get_measurements(self):
lstMeas = []
if self.parent.gui.gbAssort.isEnabled():
lstMeas.append(self.parent.gui.gbAssort.title())
if self.parent.gui.gbClustering.isEnabled():
lstMeas.append(self.parent.gui.gbClustering.title())
if self.parent.gui.gbReciprocity.isEnabled():
lstMeas.append(self.parent.gui.gbReciprocity.title())
if self.parent.gui.gbConnectComp.isEnabled():
lstMeas.append(self.parent.gui.gbConnectComp.title())
if self.parent.gui.tabWAnalysis.currentIndex() == 0:
lstMeas.append("Weak CC")
if self.parent.gui.gbDiameter.isEnabled():
lstMeas.append(self.parent.gui.gbDiameter.title())
if self.parent.gui.gbSpectrum.isEnabled():
lstMeas.append(self.parent.gui.gbSpectrum.title())
return lstMeas
##################
# Graph analysis
def plotDistrib(self):
# get selected graph
idxCurrent = self.parent.gui.comboBoxSelectGraph.currentIndex()
graph = self.parent.gui.comboBoxSelectGraph.itemData(idxCurrent)
strGraphName = graph.get_name().replace(".", "p")
# do we care about weights?
bWeights = False
if self.parent.gui.checkBoxConsiderWeights.isChecked():
bWeights = True
# look at which subgraph(s) we want to study
dicGraphType = {}
dicGraphStorage = {}
if self.parent.gui.checkBoxAnalyzeExc.isChecked():
dicGraphType["Exc"] = graph.genExcSubgraph
if self.parent.gui.checkBoxAnalyzeInhib.isChecked():
dicGraphType["Inhib"] = graph.genInhibSubgraph
if self.parent.gui.checkBoxAnalyzeAll.isChecked():
dicGraphType["Total"] = graph.copy
dicBetwNodes = {}
dicBetwEdges = {}
# plot properties
if self.parent.gui.gbBetweenness.isChecked():
lstArgsBetw = []
if self.parent.gui.checkBoxBetwEdges.isChecked():
lstArgsBetw.append("Edges")
if self.parent.gui.checkBoxBetwNodes.isChecked():
lstArgsBetw.append("Nodes")
for strType in dicGraphType.keys():
dicGraphStorage[strType] = dicGraphType[strType]()
strFileName = "betw_{}_{}".format(strGraphName, strType)
strGP = self.parent.gnuPlotter.genGpStrBetw(strFileName, lstArgsBetw)
strGPTMP, dicBetwNodes[strType], dicBetwEdges[strType] = plotBetwDistrib(
self.parent, dicGraphStorage[strType], lstArgsBetw, False, bWeights
)
strGP += strGPTMP
strSubprocess = "data/histoBetweenness.gp"
with open(strSubprocess, "w") as fileGP:
fileGP.write(strGP)
subprocess.call(["gnuplot", strSubprocess])
if self.parent.gui.gbDegDistrib.isChecked():
lstArgsDeg = []
if self.parent.gui.checkBoxDegIn.isChecked():
lstArgsDeg.append("in")
if self.parent.gui.checkBoxDegOut.isChecked():
lstArgsDeg.append("out")
if self.parent.gui.checkBoxDegTot.isChecked():
lstArgsDeg.append("total")
for strType in dicGraphType.keys():
if strType not in dicGraphStorage.keys():
dicGraphStorage[strType] = dicGraphType[strType]()
strFileName = "deg_{}_{}".format(strGraphName, strType)
strGP, bLogDeg = self.parent.gnuPlotter.genGpStrDeg(strFileName, lstArgsDeg)
strGP += plotDegDistrib(self.parent, dicGraphStorage[strType], lstArgsDeg, bLogDeg, bWeights)
strSubprocess = "data/histoDegree.gp"
with open(strSubprocess, "w") as fileGP:
fileGP.write(strGP)
subprocess.call(["gnuplot", strSubprocess])
if bWeights:
dicPlots = {}
for strType in dicGraphType.keys():
if strType not in dicGraphStorage.keys():
dicGraphStorage[strType] = dicGraphType[strType]()
arrWeightCount, arrWeight = weight_distribution(dicGraphStorage[strType], False)
dicPlots["Weight distrib. ({})".format(strType)] = [
np.array([arrWeight, arrWeightCount]),
"Count",
"Weight",
]
plotView = self.plottingWidget.createPlotView(dicPlots)
self.plottingWidget.addPlotView(graph.get_name(), plotView)
self.plottingWidget.show()
# nodes' properties
bNodeProp = False
strHeader = "Node"
lstStrVal = np.arange(graph.num_vertices()).astype(str)
lstTab = np.repeat("\t", graph.num_vertices())
if self.parent.gui.checkBoxBetwVal.isChecked():
bNodeProp = True
for strType in dicGraphType.keys():
if strType not in dicGraphStorage.keys():
dicGraphStorage[strType] = dicGraphType[strType]()
dicBetwNodes[strType] = betwCentrality(dicGraphStorage[strType], bWeights)[0]
elif strType not in dicBetwNodes.keys():
dicBetwNodes[strType] = betwCentrality(dicGraphStorage[strType], bWeights)[0]
strHeader += "\tBetw.-" + strType
lstStrVal = np.core.defchararray.add(lstStrVal, lstTab)
lstStrVal = np.core.defchararray.add(lstStrVal, dicBetwNodes[strType].a.astype(str))
if self.parent.gui.gbDegreeVal.isChecked():
bNodeProp = True
for strType in dicGraphType.keys():
if strType not in dicGraphStorage.keys():
dicGraphStorage[strType] = dicGraphType[strType]()
if self.parent.gui.checkBoxInDegVal.isChecked():
strHeader += "\tIn-deg.-" + strType
lstStrVal = np.core.defchararray.add(lstStrVal, lstTab)
lstDeg = dicGraphStorage[strType].get_graph().degree_property_map("in").a
lstStrVal = np.core.defchararray.add(lstStrVal, lstDeg.astype(str))
if self.parent.gui.checkBoxOutDegVal.isChecked():
strHeader += "\tOut-deg.-" + strType
lstStrVal = np.core.defchararray.add(lstStrVal, lstTab)
lstDeg = dicGraphStorage[strType].get_graph().degree_property_map("out").a
lstStrVal = np.core.defchararray.add(lstStrVal, lstDeg.astype(str))
if self.parent.gui.checkBoxTotDegVal.isChecked():
strHeader += "\tTot.-deg.-" + strType
lstStrVal = np.core.defchararray.add(lstStrVal, lstTab)
lstDeg = dicGraphStorage[strType].get_graph().degree_property_map("total").a
lstStrVal = np.core.defchararray.add(lstStrVal, lstDeg.astype(str))
strHeader += "\n"
if bNodeProp:
with open("data/nodeVal" + strGraphName, "w") as fileNodeVal:
fileNodeVal.write(strHeader)
idxLast = len(lstStrVal) - 1
for i in range(idxLast + 1):
fileNodeVal.write(lstStrVal[i])
if i != idxLast:
fileNodeVal.write("\n")
# nodes' sorting
bNodeSort = False
nNodesToKeep = self.parent.gui.sbNodesToKeep.value()
strSort = ""
if self.parent.gui.checkBoxBetwSort.isChecked():
bNodeSort = True
for strType in dicGraphType.keys():
if strType not in dicGraphStorage.keys():
dicGraphStorage[strType] = dicGraphType[strType]()
dicBetwNodes[strType] = betwCentrality(dicGraphStorage[strType], bWeights)[0]
elif strType not in dicBetwNodes.keys():
dicBetwNodes[strType] = betwCentrality(dicGraphStorage[strType], bWeights)[0]
strSort += "Node betweenness sorting - " + strType + "\n"
lstBetwSort = np.argsort(dicBetwNodes[strType].a)
for i in range(nNodesToKeep):
strSort += " {}".format(lstBetwSort[i])
strSort += "\n"
if self.parent.gui.gbDegSort.isChecked():
bNodeSort = True
for strType in dicGraphType.keys():
if strType not in dicGraphStorage.keys():
dicGraphStorage[strType] = dicGraphType[strType]()
if self.parent.gui.checkBoxInDegSort.isChecked():
lstDeg = dicGraphStorage[strType].get_graph().degree_property_map("in").a
strSort += "Node in-degree sorting - " + strType + "\n"
for i in range(nNodesToKeep):
strSort += " {}".format(lstDeg[i])
strSort += "\n"
if self.parent.gui.checkBoxOutDegSort.isChecked():
lstDeg = dicGraphStorage[strType].get_graph().degree_property_map("out").a
strSort += "Node out-degree sorting - " + strType + "\n"
for i in range(nNodesToKeep):
strSort += " {}".format(lstDeg[i])
strSort += "\n"
if self.parent.gui.checkBoxTotDegSort.isChecked():
lstDeg = dicGraphStorage[strType].get_graph().degree_property_map("total").a
strSort += "Node total-degree sorting - " + strType + "\n"
for i in range(nNodesToKeep):
strSort += " {}".format(lstDeg[i])
strSort += "\n"
if bNodeSort:
with open("data/sort_" + strGraphName, "w") as fileSort:
fileSort.write(strSort)
# betweenness Vs weight
if self.parent.gui.checkBoxBetwVsWeight.isChecked():
for strType in dicGraphType.keys():
if strType not in dicGraphStorage.keys():
dicGraphStorage[strType] = dicGraphType[strType]()
dicBetwEdges[strType] = betwCentrality(dicGraphStorage[strType])[1]
elif strType not in dicBetwEdges.keys():
dicBetwEdges[strType] = betwCentrality(dicGraphStorage[strType])[1]
plotBetwVsWeight(self.parent, dicGraphStorage[strType], dicBetwEdges[strType])
def plotEvolProp(self):
# get requested averaging number
numAvg = 1
if self.parent.gui.sbAverage.isEnabled():
numAvg = self.parent.gui.sbAverage.value()
print("--- Averaging over {} samples ---".format(numAvg))
dicVaryingQuantities = {}
lstStrMeasurements = self.get_measurements()
dicVaryingQuantities = self.get_varying_quantities()
# check log and weights
bWeights = False
dicLog = {"Degree": False, "Betweenness": False}
if self.parent.gui.checkBoxConsiderWeights.isChecked():
bWeights = True
if self.parent.gui.checkBoxLogDegX.isChecked():
dicLog["Degree"] = True
if self.parent.gui.checkBoxLogBetwX.isChecked():
dicLog["Betweenness"] = True
# check subgraph types to be studied:
lstSubgraphTypes = []
if self.parent.gui.checkBoxAnalyzeExc.isChecked():
lstSubgraphTypes.append("Exc")
if self.parent.gui.checkBoxAnalyzeInhib.isChecked():
lstSubgraphTypes.append("Inhib")
if self.parent.gui.checkBoxAnalyzeAll.isChecked():
lstSubgraphTypes.append("All")
# for each varying quantity
for strVarQuantity, lstVarValues in dicVaryingQuantities.items():
# initialize progressbar and plots informations
self.parent.gui.init_progressbar()
dicPlotFunc, dicArgs, dicStrGp = checkPlots(self.parent, lstSubgraphTypes, strVarQuantity)
nNecessarySteps = len(lstVarValues)
# file names
strFile = "evol_{}_var{}_".format(self.parent.gui.cbNetTypeEvol.currentText(), strVarQuantity)
for strMeas in lstStrMeasurements:
strFile += strMeas[:1]
dicFileNames = {subgraphType: strFile + "_{}".format(subgraphType) for subgraphType in lstSubgraphTypes}
# initialize files
initFiles(self.parent, lstSubgraphTypes, dicFileNames, strVarQuantity, lstStrMeasurements)
# iterations and averaging
rStepToPercent = 100.0 / (nNecessarySteps * numAvg)
for i in range(nNecessarySteps):
self.setDicPropGraphEvol(strVarQuantity, lstVarValues[i])
# dictionnary containing the average values for each graph subtypes
dicAvgValues, dicAvgDistrib = initDicAvg(dicPlotFunc, dicArgs, lstStrMeasurements)
dicGraphAvgValues = {subgraphType: deepcopy(dicAvgValues) for subgraphType in lstSubgraphTypes}
dicGraphAvgDistrib = {subgraphType: deepcopy(dicAvgDistrib) for subgraphType in lstSubgraphTypes}
# ~ dicGraphAvgValues = { subgraphType: multiprocessing.Manager().dict(dicAvgValues) for subgraphType in lstSubgraphTypes }
# ~ dicGraphAvgDistrib = { subgraphType: multiprocessing.Manager().dict(dicAvgDistrib) for subgraphType in lstSubgraphTypes }
strAddInfo = "{}{}".format(strVarQuantity[0:4], lstVarValues[i])
strGraphName = ""
numNodes = 0
for j in range(numAvg):
graph = GraphClass(self.dicProperties)
QtGui.qApp.processEvents()
strGraphName = graph.get_name().replace(".", "p")
numNodes = graph.num_vertices()
# for each subgraph (exc, inhib, all/complete)
for subgraphType, dicAvg in dicGraphAvgValues.items():
# ~ dicGraphDistribs = dicGraphAvgDistrib[subgraphType]
# ~ procScalar = multiprocessing.Process(target=getNetworkProperties, args=(graph, subgraphType, self.dicNetAnalysis, dicPlotFunc, lstStrMeasurements, dicAvg, numAvg))
# ~ self.parent.gui.lstProcessesEvolProp[-1].append(procScalar)
# ~ procScalar.start()
# ~ # distributions
# ~ procDistrib = multiprocessing.Process(target=getNetworkDistrib, args=(graph, subgraphType, dicGraphDistribs,dicLog,bWeights,i,strAddInfo))
# ~ self.parent.gui.lstProcessesEvolProp[-1].append(procDistrib)
# ~ procDistrib.start()
dicGraphDistribs = dicGraphAvgDistrib[subgraphType]
QtGui.qApp.processEvents()
# scalar properties
getNetworkProperties(
graph, subgraphType, self.dicNetAnalysis, dicPlotFunc, lstStrMeasurements, dicAvg, numAvg
)
QtGui.qApp.processEvents()
# distributions
getNetworkDistrib(graph, subgraphType, dicGraphDistribs, dicLog, bWeights, i, strAddInfo)
# update progressBar
self.parent.gui.progBarEvolProp.setValue(float(numAvg * i + j + 1) * rStepToPercent)
QtGui.qApp.processEvents()
# ~ for proc in self.parent.gui.lstProcessesEvolProp[-1]:
# ~ proc.join()
# ~ if self.parent.gui.lstProcessesEvolProp:
# ~ self.parent.gui.lstProcessesEvolProp.pop()
# ~ self.parent.gui.progBarEvolProp.setValue(float(numAvg*(i+1))*rStepToPercent)
# ~ QtGui.qApp.processEvents()
# compute distrib and write averaged properties
computeDistributions(numNodes, dicLog, dicGraphAvgDistrib, numAvg)
writeAveragedMeasurements(
self.parent,
strGraphName,
lstVarValues[i],
dicStrGp,
dicFileNames,
dicGraphAvgValues,
lstStrMeasurements,
nNecessarySteps,
i,
strAddInfo,
)
writeAveragedDistributions(
self.parent,
strGraphName,
lstVarValues[i],
dicStrGp,
dicFileNames,
dicGraphAvgDistrib,
nNecessarySteps,
i,
strAddInfo,
)
self.parent.gui.progBarEvolProp.setVisible(False)
# plot the measurements
if self.parent.gui.gbGraphMeas.isChecked():
for subgraphType in lstSubgraphTypes:
with open("data/" + dicFileNames[subgraphType] + ".gp", "w") as fileGP:
strGP, lstLabelsY2 = self.parent.gnuPlotter.genGpStrEvolMeas(
dicFileNames[subgraphType], strVarQuantity, lstStrMeasurements
)
for col, strMeas in enumerate(lstStrMeasurements):
strGP += self.parent.gnuPlotter.completeGpStrEvol(
dicFileNames[subgraphType], lstLabelsY2, col, strMeas
)
if strMeas != lstStrMeasurements[-1]:
strGP += ",\\\n"
fileGP.write(strGP)
strSubprocess = "data/" + dicFileNames[subgraphType] + ".gp"
subprocess.call(["gnuplot", strSubprocess]) # careful to call it OUT of 'with open(...) as ...'
# plot the distributions if necessary
for subgraphType in lstSubgraphTypes:
for strPlot in dicPlotFunc.keys():
strSubprocess = "data/histo" + strPlot + "Exc.gp"
with open(strSubprocess, "w") as fileGP:
fileGP.write(dicStrGp[subgraphType][strPlot])
subprocess.call(["gnuplot", strSubprocess]) # careful to call it OUT of 'with open(...) as ...'
def get_varying_quantities(self):
dicVaryingQuantities = {}
dicSSS = {"Start": 0, "Stop": 0, "Step": 0}
for child in self.parent.gui.gbEvolX.children():
if child != self.parent.gui.gbEvolX.layout():
# on parcours toutes les groupBox des quantités pouvant varier
if child.isChecked():
strQuantity = child.title()
for subChild in child.children():
# on cherche les dsb et sb des Start, Stop, Step
nLen = len(subChild.objectName())
if subChild.objectName()[nLen - 5 :] == "Start":
dicSSS["Start"] = subChild.value()
if subChild.objectName()[nLen - 4 :] == "Stop":
dicSSS["Stop"] = subChild.value()
if subChild.objectName()[nLen - 4 :] == "Step":
dicSSS["Step"] = subChild.value()
dicVaryingQuantities[strQuantity] = np.arange(dicSSS["Start"], dicSSS["Stop"], dicSSS["Step"])
return dicVaryingQuantities
def show_measurements(self):
lstStrMeasurements = self.get_measurements()
dicData = {}
idxCurrent = self.parent.gui.comboBoxSelectGraph.currentIndex()
graph = self.parent.gui.comboBoxSelectGraph.itemData(idxCurrent)
print(graph.get_density())
if self.parent.gui.gbGraphMeas.isChecked():
if self.parent.gui.checkBoxAnalyzeExc.isChecked():
subGraph = graph.genExcSubgraph()
for strMeas in lstStrMeasurements:
rMeas = self.dicNetAnalysis[strMeas](subGraph.get_graph())
dicData[strMeas] = rMeas
strTitle = graph.get_name() + "Exc"
self.plottingWidget.addData(strTitle, dicData)
dicData = {}
if self.parent.gui.checkBoxAnalyzeInhib.isChecked():
subGraph = graph.genInhibSubgraph()
for strMeas in lstStrMeasurements:
rMeas = self.dicNetAnalysis[strMeas](subGraph.get_graph())
dicData[strMeas] = rMeas
strTitle = graph.get_name() + "Inhib"
self.plottingWidget.addData(strTitle, dicData)
dicData = {}
if self.parent.gui.checkBoxAnalyzeAll.isChecked():
for strMeas in lstStrMeasurements:
rMeas = self.dicNetAnalysis[strMeas](graph.get_graph())
dicData[strMeas] = rMeas
strTitle = graph.get_name()
self.plottingWidget.addData(strTitle, dicData)
self.plottingWidget.show()
def __del__(self):
self.dicNetAnalysis = None
print("GraphAnalysis died")
