def _getSvnVersion(filename):
"""Tries to discover the svn version (revision #) for a file.
Not thoroughly tested; completely untested on Windows Vista, Win 7, FreeBSD
:Author:
- 2010 written by Jeremy Gray
"""
if not (os.path.exists(filename) and os.path.isdir(os.path.join(os.path.dirname(filename), '.svn'))):
return None, None, None
svnRev, svnLastChangedRev, svnUrl = None, None, None
if sys.platform in ['darwin', 'freebsd'] or sys.platform.startswith('linux'):
try:
svninfo = shellCall(['svn', 'info', filename]) # expects a filename, not dir
except:
svninfo = ''
for line in svninfo.splitlines():
if line.startswith('URL:'):
svnUrl = line.split()[1]
elif line.startswith('Revision: '):
svnRev = line.split()[1]
elif line.startswith('Last Changed Rev'):
svnLastChangedRev = line.split()[3]
else: # worked for me on Win XP sp2 with TortoiseSVN (SubWCRev.exe)
try:
stdout = shellCall(['subwcrev', filename])
except:
stdout = ''
for line in stdout.splitlines():
if line.startswith('Last committed at revision'):
svnRev = line.split()[4]
elif line.startswith('Updated to revision'):
svnLastChangedRev = line.split()[3]
return svnRev, svnLastChangedRev, svnUrl
def flac2wav(path, keep=True):
"""Uncompress: convert .flac file (on disk) to .wav format (new file).
If `path` is a directory name, convert all .flac files in the directory.
`keep` to retain the original .flac file(s), default `True`.
"""
flac_path = _getFlacPath()
flac_files = []
if path.endswith(".flac"):
flac_files = [path]
elif type(path) == str and os.path.isdir(path):
flac_files = glob.glob(os.path.join(path, "*.flac"))
if len(flac_files) == 0:
logging.warn("failed to find .flac file(s) from %s" % path)
return None
wav_files = []
for flacfile in flac_files:
wavfile = flacfile.strip(".flac") + ".wav"
flac_cmd = [flac_path, "-d", "--totally-silent", "-f", "-o", wavfile, flacfile]
__, se = core.shellCall(flac_cmd, stderr=True)
if se or not os.path.isfile(flacfile): # just try again
logging.warn("Failed to convert to .wav; trying again")
__, se = core.shellCall(flac_cmd, stderr=True)
if se:
logging.error(se)
if not keep:
os.unlink(flacfile)
wav_files.append(wavfile)
if len(wav_files) == 1:
return wav_files[0]
else:
return wav_files
def _getHgVersion(filename):
"""Tries to discover the mercurial (hg) parent and id of a file.
Not thoroughly tested; untested on Windows Vista, Win 7, FreeBSD
:Author:
- 2010 written by Jeremy Gray
"""
dirname = os.path.dirname
if (not os.path.exists(filename) or
not os.path.isdir(os.path.join(dirname(filename), '.hg'))):
return None
try:
hgParentLines, err = shellCall(['hg', 'parents', filename],
stderr=True)
changeset = hgParentLines.splitlines()[0].split()[-1]
except Exception:
changeset = ''
try:
hgID, err = shellCall(['hg', 'id', '-nibt', dirname(filename)],
stderr=True)
except Exception:
if err:
hgID = ''
if len(hgID) or len(changeset):
return hgID.strip() + ' | parent: ' + changeset.strip()
else:
return None
def wav2flac(path, keep=True):
"""Lossless compression: convert .wav file (on disk) to .flac format.
If `path` is a directory name, convert all .wav files in the directory.
`keep` to retain the original .wav file(s), default `True`.
"""
flac_path = _getFlacPath()
wav_files = []
if path.endswith(".wav"):
wav_files = [path]
elif type(path) == str and os.path.isdir(path):
wav_files = glob.glob(os.path.join(path, "*.wav"))
if len(wav_files) == 0:
logging.warn("failed to find .wav file(s) from %s" % path)
return None
flac_files = []
for wavfile in wav_files:
flacfile = wavfile.strip(".wav") + ".flac"
flac_cmd = [flac_path, "-8", "-f", "--totally-silent", "-o", flacfile, wavfile]
__, se = core.shellCall(flac_cmd, stderr=True)
if se or not os.path.isfile(flacfile): # just try again
# ~2% incidence when recording for 1s, 650+ trials
# never got two in a row; core.wait() does not help
logging.warn("Failed to convert to .flac; trying again")
__, se = core.shellCall(flac_cmd, stderr=True)
if se:
logging.error(se)
if not keep:
os.unlink(wavfile)
flac_files.append(flacfile)
if len(wav_files) == 1:
return flac_files[0]
else:
return flac_files
def _getHgVersion(file):
"""Tries to discover the mercurial (hg) parent and id of a file.
Not thoroughly tested; completely untested on Windows Vista, Win 7, FreeBSD
:Author:
- 2010 written by Jeremy Gray
"""
if not os.path.exists(file) or not os.path.isdir(os.path.join(os.path.dirname(file),'.hg')):
return None
try:
hgParentLines,err = shellCall('hg parents "'+file+'"', stderr=True)
changeset = hgParentLines.splitlines()[0].split()[-1]
except:
changeset = ''
#else: changeset = hgParentLines.splitlines()[0].split()[-1]
try:
hgID,err = shellCall('hg id -nibt "'+os.path.dirname(file)+'"', stderr=True)
except:
if err: hgID = ''
if len(hgID) or len(changeset):
return hgID.strip()+' | parent: '+changeset.strip()
else:
return None
def OnClickedVSTMDemo(self, event):
btn = event.GetEventObject().GetLabel()
print("Label of pressed button = %s" % (btn))
core.shellCall([
sys.executable, "VSTMPsychopyFiles/VSTM_CirclesInGrid_DEMOv1.py",
self.PartID.GetValue()
])
self.VSTMDEMOCB.SetValue(True)
def OnClickedFRTDemo(self, event):
btn = event.GetEventObject().GetLabel()
print("Label of pressed button = %s" % (btn))
core.shellCall([
sys.executable, "FRTPsychopyFiles/FRTDemo_GUI.py",
self.PartID.GetValue()
])
self.FRTDEMOCB.SetValue(True)
def OnClickedR5C6(self, event):
# Use the tag to keep track of the run number
self.DMSTag = self.DMSTag + 1
btnR5C6Label = event.GetEventObject().GetLabel()
print("Label of pressed button = %s"%(btnR5C6Label))
print("Load levels: %s"%(self.DMSBlockLoadLevels))
core.shellCall([sys.executable, "../DMSPsychopyFiles/DMS_Adaptive5Load_v4NP.py", self.PartID.GetValue(), self.VisitFolderPath, self.DMSBlockLoadLevels, self.DMSFontSize, 'BehRun%d'%(self.DMSTag)])
self.cbR5C6.SetValue(True)
def OnClickedR9C3(self, event):
btnR9C3Label = event.GetEventObject().GetLabel()
print("Label of pressed button = %s" % (btnR9C3Label))
core.shellCall([
sys.executable, "../Matrices/MatricesWClockMainv2.py",
self.PartID.GetValue(), self.VisitFolderPath
])
self.cbR9C3.SetValue(True)
def OnClickedR1C3(self, event):
btnR1C3Label = event.GetEventObject().GetLabel()
print("Label of pressed button = %s" % (btnR1C3Label))
core.shellCall([
sys.executable, "../Stroop/StroopWordv1.py",
self.PartID.GetValue(), self.VisitFolderPath
])
self.cbR1C3.SetValue(True)
def OnClickedR8C2(self, event):
btnR8C2Label = event.GetEventObject().GetLabel()
print("Label of pressed button = %s" % (btnR8C2Label))
core.shellCall([
sys.executable, "../PatternComparison/PatternComparison_v2.py",
self.PartID.GetValue(), self.VisitFolderPath
])
self.cbR8C2.SetValue(True)
def OnClickedR7C3(self, event):
btnR7C3Label = event.GetEventObject().GetLabel()
print("Label of pressed button = %s" % (btnR7C3Label))
core.shellCall([
sys.executable, "../DigitSpan/BackwardDigitSpan.py",
self.PartID.GetValue(), self.VisitFolderPath
])
self.cbR7C3.SetValue(True)
def OnClickedR5C2(self, event):
btnR5C2Label = event.GetEventObject().GetLabel()
print("Label of pressed button = %s" % (btnR5C2Label))
core.shellCall([
sys.executable, "../DMSPsychopyFiles/DMSDemo_GUI_v2.py",
self.PartID.GetValue(), self.VisitFolderPath, self.DMSFontSize
])
self.cbR5C2.SetValue(True)
def OnClickedDMSDemo(self, event):
btn = event.GetEventObject().GetLabel()
print "Label of pressed button = ", btn
core.shellCall([
sys.executable, "DMSPsychopyFiles/DMSDemo_GUI.py",
self.PartID.GetValue(), '60'
])
self.DMSDEMOCB.SetValue(True)
def test_stdin_and_stderr(self):
echo, se = shellCall([self.cmd, self.msg], stdin='echo', stderr=True)
assert echo == self.msg
assert se == ''
echo, se = shellCall(self.cmd + ' ' + self.msg, stdin='echo',
stderr=True)
assert echo == self.msg
assert se == ''
def OnClickedDMSStair(self, event):
self.DMSStairCaseDateStr = data.getDateStr()
btn = event.GetEventObject().GetLabel()
print "Label of pressed button = ", btn
core.shellCall([
sys.executable, "DMSPsychopyFiles/DMSStairCase_v4_forBehav.py",
self.PartID.GetValue()
])
self.LoadDMSCapacity(self)
def OnClickedDMSDemo(self, event):
FontSize = '60'
btn = event.GetEventObject().GetLabel()
print("Label of pressed button = %s" % (btn))
core.shellCall([
sys.executable, "DMSPsychopyFiles/DMSDemo_GUI.py",
self.PartID.GetValue(), FontSize
])
self.DMSDEMOCB.SetValue(True)
def OnClickedR3C2(self, event):
btnR3C2Label = event.GetEventObject().GetLabel()
print("Label of pressed button = %s" % (btnR3C2Label))
core.shellCall([
sys.executable,
"../VSTMPsychopyFiles/VSTM_CirclesInGrid_DEMOv2.py",
self.PartID.GetValue(), self.VisitFolderPath
])
self.cbR3C2.SetValue(True)
def OnClickedRMemC2(self, event):
btnMemC2Label = event.GetEventObject().GetLabel()
print("Label of pressed button = %s" % (btnMemC2Label))
core.shellCall([
sys.executable,
"../SelectiveReminding/SelectiveRemindingWithTimerSoundsv1.py",
self.PartID.GetValue(), self.VisitFolderPath
])
self.cbRMemC2.SetValue(True)
def OnClickedR5C3(self, event):
btnR5C3Label = event.GetEventObject().GetLabel()
print("Label of pressed button = %s" % (btnR5C3Label))
core.shellCall([
sys.executable, "../DMSPsychopyFiles/DMSStairCase_v4.py",
self.PartID.GetValue(), self.VisitFolderPath
])
self.LoadDMSCapacity(True)
self.cbR5C3.SetValue(True)
def OnClickedDMSStair(self, event):
FontSize = '60'
self.DMSStairCaseDateStr = data.getDateStr()
btn = event.GetEventObject().GetLabel()
print("Label of pressed button = %s" % (btn))
core.shellCall([
sys.executable, "DMSPsychopyFiles/DMSStairCase_v3.py",
self.PartID.GetValue(), FontSize
])
self.LoadDMSCapacity(self)
def OnClickedFRTBlock(self, event):
btn = event.GetEventObject().GetLabel()
print("Label of pressed button = " % (btn))
print self.PartID.GetValue()
print self.FRTBlockLoadLevels
core.shellCall([
sys.executable, "FRTPsychopyFiles/FRT_Adaptive.py",
self.PartID.GetValue(), self.FRTBlockLoadLevels
])
self.FRTBlockCB1.SetValue(True)
def OnClickedFRTStair(self, event):
btn = event.GetEventObject().GetLabel()
print "Label of pressed button = ", btn
self.FRTStairCaseDateStr = data.getDateStr()
core.shellCall([
sys.executable, "FRTPsychopyFiles/FRTStairCase_v1.py",
self.PartID.GetValue()
])
# after the task is run read the capicity file
self.LoadFRTCapacity(self)
def OnClickedRMemC6(self, event):
btnMemC6Label = event.GetEventObject().GetLabel()
print("Label of pressed button = %s" % (btnMemC6Label))
#core.shellCall([sys.executable, "../SelectiveReminding/SRTRecogSequentialPres.py", self.PartID.GetValue(), self.VisitFolderPath])
core.shellCall([
sys.executable,
"../SelectiveReminding/SRTRecogSequentialPresSounds.py",
self.PartID.GetValue(), self.VisitFolderPath
])
self.cbRMemC6.SetValue(True)
def OnClickedR10C4(self, event):
self.NBackTag = self.NBackTag + 1
btnR10C4Label = event.GetEventObject().GetLabel()
print("Label of pressed button = NBack: %s" % (btnR10C4Label))
core.shellCall([
sys.executable, "../NBack/NBackPassConfigFile.py",
self.PartID.GetValue(), self.VisitFolderPath,
'MRIRun%02d' % (self.NBackTag), 'NBack_fMRI_Config', 'Fixed'
])
self.cbR10C4.SetValue(True)
def test_stdin_and_stderr(self):
echo, se = shellCall([self.cmd, self.msg], stdin='echo', stderr=True)
assert echo == self.msg
assert se == ''
echo, se = shellCall(self.cmd + ' ' + self.msg,
stdin='echo',
stderr=True)
assert echo == self.msg
assert se == ''
def OnClickedVSTMStair(self, event):
btn = event.GetEventObject().GetLabel()
print("Label of pressed button = %s" % (btn))
self.VSTMStairCaseDateStr = data.getDateStr()
core.shellCall([
sys.executable,
"VSTMPsychopyFiles/VSTM_CirclesInGridStaircase_v2.py",
self.PartID.GetValue()
])
# after the task is run read the capicity file
self.LoadVSTMCapacity(self)
def OnClickedR3C3(self, event):
btnR3C3Label = event.GetEventObject().GetLabel()
print("Label of pressed button = %s" % (btnR3C3Label))
core.shellCall([
sys.executable,
"../VSTMPsychopyFiles/VSTM_CirclesInGridStaircase_v3.py",
self.PartID.GetValue(), self.VisitFolderPath
])
# Once the staircase is run, load up the file that is created and display it
self.LoadVSTMCapacity(self)
self.cbR3C3.SetValue(True)
def OnClickedR3C4(self, event):
self.VSTMTag = self.VSTMTag + 1
btnR3C4Label = event.GetEventObject().GetLabel()
print("Label of pressed button = %s"%(btnR3C4Label))
#VSTMCapacity = 7
# self.VSTMBlockLoadLevels = self.CreateVSTMList5(self.VSTMCapacity)
# print('With a capacity of %0.1f, the load levels will be:'%(float(self.VSTMCapacity)))
print(self.VSTMBlockLoadLevels)
core.shellCall([sys.executable, "../VSTMPsychopyFiles/VSTM_PassConfigFile.py", self.PartID.GetValue(), self.VisitFolderPath, self.VSTMBlockLoadLevels, 'BehRun%d'%(self.VSTMTag),'VSTM_Behav_Config','True'])
#core.shellCall([sys.executable, "../VSTMPsychopyFiles/VSTM_CirclesInGrid_v6.py", self.PartID.GetValue(), self.VisitFolderPath, self.VSTMBlockLoadLevels, 'BehRun%d'%(self.VSTMTag)])
self.cbR3C4.SetValue(True)
def test_shellCall():
msg = 'echo'
cmd = ('grep', 'findstr')[sys.platform == 'win32']
for arg1 in [[cmd, msg], cmd+' '+msg]:
echo = shellCall(arg1, stdin=msg)
assert echo == msg
echo, se = shellCall(arg1, stdin=msg, stderr=True)
assert echo == msg
echo, se = shellCall(12, stdin=msg)
assert echo == None
def test_shellCall():
msg = 'echo'
cmd = ('grep', 'findstr')[sys.platform == 'win32']
for arg1 in [[cmd, msg], cmd + ' ' + msg]:
echo = shellCall(arg1, stdin=msg)
assert echo == msg
echo, se = shellCall(arg1, stdin=msg, stderr=True)
assert echo == msg
echo, se = shellCall(12, stdin=msg)
assert echo == None
def _setSystemUserInfo(self):
# machine name
self['systemHostName'] = platform.node()
# platform name, etc
if sys.platform in ['darwin']:
OSXver, junk, architecture = platform.mac_ver()
platInfo = 'darwin ' + OSXver + ' ' + architecture
# powerSource = ...
elif sys.platform in ['linux2']:
platInfo = 'linux2 ' + platform.release()
# powerSource = ...
elif sys.platform in ['win32']:
platInfo = 'windowsversion=' + repr(sys.getwindowsversion())
# powerSource = ...
else:
platInfo = ' [?]'
# powerSource = ...
self['systemPlatform'] = platInfo
#self['systemPowerSource'] = powerSource
# count all unique people (user IDs logged in), and find current user name & UID
self['systemUser'], self['systemUserID'] = _getUserNameUID()
try:
users = shellCall("who -q").splitlines()[0].split()
self['systemUsersCount'] = len(set(users))
except:
self['systemUsersCount'] = False
# when last rebooted?
try:
lastboot = shellCall("who -b").split()
self['systemRebooted'] = ' '.join(lastboot[2:])
except: # windows
sysInfo = shellCall('systeminfo').splitlines()
lastboot = [
line for line in sysInfo if line.find("System Up Time") == 0
or line.find("System Boot Time") == 0
]
lastboot += ['[?]'] # put something in the list just in case
self['systemRebooted'] = lastboot[0].strip()
# is R available (for stats)?
try:
Rver, err = shellCall("R --version", stderr=True)
Rversion = Rver.splitlines()[0]
if Rversion.find('R version') == 0:
self['systemRavailable'] = Rversion.strip()
else:
raise
except:
self['systemRavailable'] = False
"""try:
def _getFlacPath(flac_exe=''):
"""Return full path to flac binary, using a cached value if possible.
"""
global FLAC_PATH
if FLAC_PATH is None:
if sys.platform == 'win32':
if os.path.isfile(flac_exe):
FLAC_PATH = flac_exe
else:
FLAC_PATH = core.shellCall(['where', '/r', 'C:\\', 'flac'])
else:
FLAC_PATH = core.shellCall(['/usr/bin/which', 'flac'])
logging.info('set FLAC_PATH to %s' % FLAC_PATH)
return FLAC_PATH
def __init__(self):
from psychopy import core
import os
# should be writable:
noopPath = os.path.join(psychopy.prefs.paths['userPrefsDir'], 'showgui_hack.py')
# code to open & immediately close a gui (= invisibly):
if not os.path.isfile(noopPath):
code = """from psychopy import gui
dlg = gui.Dlg().Show() # non-blocking
try: dlg.Destroy() # might as well
except: pass""".replace(' ', '')
with open(noopPath, 'wb') as fd:
fd.write(code)
core.shellCall([sys.executable, noopPath]) # append 'w' for pythonw seems not needed
def OnClickedWORDDemo(self, event):
print(self.CounterBalCB.GetValue())
btn = event.GetEventObject().GetLabel()
CounterBalFlag = str(self.CounterBalCB.GetValue())
print("Label of pressed button = %s" % (btn))
Tag = 'WordDemo'
print self.PartID.GetValue()
# print self.DMSBlockLoadLevels
#core.shellCall([sys.executable, "DMSPsychopyFiles/DMS_Adaptive_v2.py", self.PartID.GetValue(), self.DMSBlockLoadLevels])
core.shellCall([
sys.executable,
"SemanticRichness/BlockBased/SemanticRichnessBlockBasedDEMOv2.py",
self.PartID.GetValue(), CounterBalFlag, Tag
])
def _setSystemUserInfo(self):
# machine name
self['systemHostName'] = platform.node()
# platform name, etc
if sys.platform in ['darwin']:
OSXver, junk, architecture = platform.mac_ver()
platInfo = 'darwin '+OSXver+' '+architecture
# powerSource = ...
elif sys.platform in ['linux2']:
platInfo = 'linux2 '+platform.release()
# powerSource = ...
elif sys.platform in ['win32']:
platInfo = 'windowsversion='+repr(sys.getwindowsversion())
# powerSource = ...
else:
platInfo = ' [?]'
# powerSource = ...
self['systemPlatform'] = platInfo
#self['systemPowerSource'] = powerSource
# count all unique people (user IDs logged in), and find current user name & UID
self['systemUser'],self['systemUserID'] = _getUserNameUID()
try:
users = shellCall("who -q").splitlines()[0].split()
self['systemUsersCount'] = len(set(users))
except:
self['systemUsersCount'] = False
# when last rebooted?
try:
lastboot = shellCall("who -b").split()
self['systemRebooted'] = ' '.join(lastboot[2:])
except: # windows
sysInfo = shellCall('systeminfo').splitlines()
lastboot = [line for line in sysInfo if line.find("System Up Time") == 0 or line.find("System Boot Time") == 0]
lastboot += ['[?]'] # put something in the list just in case
self['systemRebooted'] = lastboot[0].strip()
# is R available (for stats)?
try:
Rver,err = shellCall("R --version",stderr=True)
Rversion = Rver.splitlines()[0]
if Rversion.find('R version') == 0:
self['systemRavailable'] = Rversion.strip()
else: raise
except:
self['systemRavailable'] = False
"""try:
def OnClickedR3C4(self, event):
btnR3C4Label = event.GetEventObject().GetLabel()
print("Label of pressed button = %s" % (btnR3C4Label))
VSTMCapacity = 7
self.VSTMBlockLoadLevels = self.CreateVSTMList5(VSTMCapacity)
print('With a capacity of %0.1f, the load levels will be:' %
(VSTMCapacity))
print(self.VSTMBlockLoadLevels)
core.shellCall([
sys.executable, "../VSTMPsychopyFiles/VSTM_CirclesInGrid_v6.py",
self.PartID.GetValue(), self.VisitFolderPath,
self.VSTMBlockLoadLevels
])
self.cbR3C4.SetValue(True)
def OnClickedR5C7(self, event):
# Use the tag to keep track of the run number
self.DMSTag = self.DMSTag + 1
btnR5C7Label = event.GetEventObject().GetLabel()
print("Label of pressed button = %s" % (btnR5C7Label))
self.DMSBlockLoadLevels = self.CreateDMSList5(self.DMSCapacity)
print('With a capacity of %0.1f, the load levels will be:' %
(float(self.DMSCapacity)))
print(self.DMSBlockLoadLevels)
core.shellCall([
sys.executable, "../DMSPsychopyFiles/DMS_Adaptive5Load_v4_FMRI.py",
self.PartID.GetValue(), self.VisitFolderPath,
self.DMSBlockLoadLevels, self.DMSFontSize,
'MRIRun%d' % (self.DMSTag)
])
self.cbR5C7.SetValue(True)
def _wizard(self, selector, arg=""):
from psychopy import core
wizard = os.path.join(self.prefs.paths["psychopy"], "wizard.py")
so, se = core.shellCall([sys.executable, wizard, selector, arg], stderr=True)
if se and self.prefs.app["debugMode"]:
print se # stderr contents; sometimes meaningless
def flac2wav(path, keep=True):
"""Uncompress: convert .flac file (on disk) to .wav format (new file).
If `path` is a directory name, convert all .flac files in the directory.
`keep` to retain the original .flac file(s), default `True`.
"""
flac_path = _getFlacPath()
flac_files = []
path = pathToString(path)
if path.endswith('.flac'):
flac_files = [path]
elif type(path) == str and os.path.isdir(path):
flac_files = glob.glob(os.path.join(path, '*.flac'))
if len(flac_files) == 0:
logging.warn('failed to find .flac file(s) from %s' % path)
return None
wav_files = []
for flacfile in flac_files:
wavname = flacfile.strip('.flac') + '.wav'
flac_cmd = [flac_path, "-d", "--totally-silent",
"-f", "-o", wavname, flacfile]
_junk, se = core.shellCall(flac_cmd, stderr=True)
if se:
logging.error(se)
if not keep:
os.unlink(flacfile)
wav_files.append(wavname)
if len(wav_files) == 1:
return wav_files[0]
else:
return wav_files
def test_shellCall():
if PY3:
# This call to shellCall from tests is failing from Python3
# but maybe it just isn't a great test anyway?!
# shellCall is used by PsychoPy Tools>Run and works on Py3 there!
pytest.xfail(reason="Failing on Py3")
msg = 'echo'
cmd = ('grep', 'findstr')[sys.platform == 'win32']
for arg1 in [[cmd, msg], cmd+' '+msg]:
echo = shellCall(arg1, stdin=msg)
assert echo == msg
echo, se = shellCall(arg1, stdin=msg, stderr=True)
assert echo == msg
echo, se = shellCall(12, stdin=msg)
assert echo is None
def _wizard(self, selector, arg=''):
from psychopy import core
wizard = os.path.join(self.prefs.paths['psychopy'], 'wizard.py')
so, se = core.shellCall([sys.executable, wizard, selector, arg],
stderr=True)
if se and self.prefs.app['debugMode']:
print se # stderr contents; sometimes meaningless
def _getUserNameUID():
"""Return user name, UID.
UID values can be used to infer admin-level:
-1=undefined, 0=full admin/root, >499=assume non-admin/root (>999 on debian-based)
:Author:
- 2010 written by Jeremy Gray
"""
try:
user = os.environ['USER']
except KeyError:
user = os.environ['USERNAME']
uid = '-1'
try:
if sys.platform not in ['win32']:
uid = shellCall('id -u')
else:
try:
uid = '1000'
if ctypes.windll.shell32.IsUserAnAdmin():
uid = '0'
except:
raise
except:
pass
return str(user), int(uid)
def _wizard(self, selector, arg=''):
from psychopy import core
wizard = os.path.join(
self.prefs.paths['psychopy'], 'tools', 'wizard.py')
so, se = core.shellCall(
[sys.executable, wizard, selector, arg], stderr=True)
if se and self.prefs.app['debugMode']:
print(se) # stderr contents; sometimes meaningless
def _prepare(self):
"""Prep for bench-marking; currently just RAM-related on mac"""
if sys.platform == 'darwin':
try:
core.shellCall('purge') # free up physical memory if possible
except OSError:
pass
elif sys.platform == 'win32':
# This will run in background, perhaps best to launch it to run overnight the day before benchmarking:
# %windir%\system32\rundll32.exe advapi32.dll,ProcessIdleTasks
# rundll32.exe advapi32.dll,ProcessIdleTasks
pass
elif sys.platform.startswith('linux'):
# as root: sync; echo 3 > /proc/sys/vm/drop_caches
pass
else:
pass
def _getHashGitHead(dir=''):
origDir = os.getcwd()
os.chdir(dir)
try:
git_hash = shellCall("git rev-parse --verify HEAD")
except OSError:
os.chdir(origDir)
return None
except WindowsError: # not defined on mac; OSError should catch lack of git
os.chdir(origDir)
return None
os.chdir(origDir)
git_branches = shellCall("git branch")
git_branch = [line.split()[1] for line in git_branches.splitlines() if line.startswith('*')]
if len(git_branch):
return git_branch[0] + ' ' + git_hash.strip()
else: # dir is not a git repo
return None
def wav2flac(path, keep=True, level=5):
"""Lossless compression: convert .wav file (on disk) to .flac format.
If `path` is a directory name, convert all .wav files in the directory.
`keep` to retain the original .wav file(s), default `True`.
`level` is compression level: 0 is fastest but larger,
8 is slightly smaller but much slower.
"""
flac_path = _getFlacPath()
wav_files = []
path = pathToString(path)
if path.endswith('.wav'):
wav_files = [path]
elif type(path) == str and os.path.isdir(path):
wav_files = glob.glob(os.path.join(path, '*.wav'))
if len(wav_files) == 0:
logging.warn('failed to find .wav file(s) from %s' % path)
return None
flac_files = []
for wavname in wav_files:
flacfile = wavname.replace('.wav', '.flac')
flac_cmd = [flac_path, "-%d" % level, "-f",
"--totally-silent", "-o", flacfile, wavname]
_junk, se = core.shellCall(flac_cmd, stderr=True)
if se or not os.path.isfile(flacfile): # just try again
# ~2% incidence when recording for 1s, 650+ trials
# never got two in a row; core.wait() does not help
logging.warn('Failed to convert to .flac; trying again')
_junk, se = core.shellCall(flac_cmd, stderr=True)
if se:
logging.error(se)
if not keep:
os.unlink(wavname)
flac_files.append(flacfile)
if len(wav_files) == 1:
return flac_files[0]
else:
return flac_files
def _detect_rev():
"""
Detects revision control system.
Recognizes: git, hg
"""
revs = ["git", "hg"]
for rev in revs:
try:
out, err = core.shellCall(rev + " status", stderr=True)
except: # revision control is not installed
pass
else:
if err[:5] not in ["abort", "fatal"]:
return rev
def _detect_rev():
"""
Detects revision control system.
Recognizes: git, hg
"""
revs = ['git', 'hg']
for rev in revs:
try:
out, err = core.shellCall(rev + ' status', stderr=True)
except: # revision control is not installed
pass
else:
if err[:5] not in ['abort', 'fatal']:
return rev
def _getFlacPath():
"""Return a path to flac binary. Log flac version (if flac was found).
"""
global FLAC_PATH
if FLAC_PATH is None:
if prefs.general['flac']:
FLAC_PATH = prefs.general['flac']
else:
FLAC_PATH = 'flac'
try:
version = core.shellCall([FLAC_PATH, '-v'], stderr=True)
except:
msg = "flac not installed (or wrong path in prefs); download from https://xiph.org/flac/download.html"
logging.error(msg)
raise MicrophoneError(msg)
logging.info('Using ' + ' '.join(version))
return FLAC_PATH
def _getUserNameUID():
"""Return user name, UID.
UID values can be used to infer admin-level:
-1=undefined, 0=full admin/root, >499=assume non-admin/root (>999 on debian-based)
:Author:
- 2010 written by Jeremy Gray
"""
user = os.environ.get('USER', None) or os.environ.get('USERNAME', None)
if not user:
return 'undefined', '-1'
if sys.platform not in ['win32']:
uid = shellCall('id -u')
else:
uid = '1000'
if haveCtypes and ctypes.windll.shell32.IsUserAnAdmin():
uid = '0'
return str(user), int(uid)
def test_Run_FastStroopPsyExp(self):
# start from a psyexp file, loadXML, execute, get keypresses from a emulator thread
pytest.skip() # test is stalling, hangs up before any text is displayed
if sys.platform.startswith("linux"):
pytest.skip("response emulation thread not working on linux yet")
expfile = path.join(self.exp.prefsPaths["tests"], "data", "ghost_stroop.psyexp")
f = codecs.open(file, "r", "utf-8")
text = f.read()
f.close()
# copy conditions file to tmp_dir
shutil.copyfile(
os.path.join(self.exp.prefsPaths["tests"], "data", "ghost_trialTypes.xlsx"),
os.path.join(self.tmp_dir, "ghost_trialTypes.xlsx"),
)
# edit the file, to have a consistent font:
text = text.replace("'Arial'", "'" + tests.utils.TESTS_FONT + "'")
# text = text.replace("Arial",tests.utils.TESTS_FONT) # fails
expfile = path.join(self.tmp_dir, "ghost_stroop.psyexp")
f = codecs.open(expfile, "w", "utf-8")
f.write(text)
f.close()
self.exp.loadFromXML(expfile) # reload the edited file
lastrun = path.join(self.tmp_dir, "ghost_stroop_lastrun.py")
script = self.exp.writeScript(expPath=file)
# reposition its window out from under splashscreen (can't do easily from .psyexp):
text = script.getvalue().replace("fullscr=False,", "pos=(40,40), fullscr=False,")
f = codecs.open(lastrun, "w", "utf-8")
f.write(text)
f.close()
# run:
stdout, stderr = core.shellCall("python " + lastrun, stderr=True)
assert not len(stderr), stderr # print stderr if it's greater than zero
def testRun_FastStroopPsyExp(self):
# start from a psyexp file, loadXML, execute, get keypresses from a emulator thread
if sys.platform.startswith('linux'):
raise nose.plugins.skip.SkipTest("response emulation thread not working on linux yet")
os.chdir(self.tmp_dir)
file = path.join(exp.prefsPaths['tests'], 'data', 'ghost_stroop.psyexp')
f = codecs.open(file, 'r', 'utf-8')
text = f.read()
f.close()
# copy conditions file to tmp_dir
shutil.copyfile(os.path.join(self.exp.prefsPaths['tests'], 'data', 'ghost_trialTypes.xlsx'),
os.path.join(self.tmp_dir,'ghost_trialTypes.xlsx'))
# edit the file, to have a consistent font:
text = text.replace("'Arial'","'"+utils.TESTS_FONT+"'")
#text = text.replace("Arial",utils.TESTS_FONT) # fails
file = path.join(self.tmp_dir, 'ghost_stroop.psyexp')
f = codecs.open(file, 'w', 'utf-8')
f.write(text)
f.close()
exp.loadFromXML(file) # reload the edited file
lastrun = path.join(self.tmp_dir, 'ghost_stroop_lastrun.py')
script = exp.writeScript(expPath=lastrun)
# reposition its window out from under splashscreen (can't do easily from .syexp):
text = script.getvalue().replace('fullscr=False,','pos=(40,40), fullscr=False,')
f = codecs.open(lastrun, 'w', 'utf-8')
f.write(text)
f.close()
# run:
stdout, stderr = shellCall('python '+lastrun, stderr=True)
if len(stderr):
print stderr
assert not len(stderr) # NB: "captured stdout" is the stderr from subprocess
def _getFlacPath(path=None):
"""Return a path to flac binary. Log flac version (if flac was found).
"""
global FLAC_PATH
if FLAC_PATH is None:
if path:
FLAC_PATH = path
elif prefs.general["flac"]:
FLAC_PATH = prefs.general["flac"]
else:
FLAC_PATH = "flac"
try:
version, se = core.shellCall([FLAC_PATH, "-v"], stderr=True)
if se:
raise MicrophoneError
except:
msg = "flac not installed (or wrong path in prefs); download from https://xiph.org/flac/download.html"
logging.error(msg)
raise MicrophoneError(msg)
logging.info("Using " + version)
return FLAC_PATH
def test_Run_FastStroopPsyExp(self):
# start from a psyexp file, loadXML, execute, get keypresses from a emulator thread
if sys.platform.startswith('linux'):
pytest.skip("response emulation thread not working on linux yet")
expfile = path.join(self.exp.prefsPaths['tests'], 'data', 'ghost_stroop.psyexp')
with codecs.open(expfile, 'r', encoding='utf-8-sig') as f:
text = f.read()
# copy conditions file to tmp_dir
shutil.copyfile(os.path.join(self.exp.prefsPaths['tests'], 'data', 'ghost_trialTypes.xlsx'),
os.path.join(self.tmp_dir,'ghost_trialTypes.xlsx'))
# edit the file, to have a consistent font:
text = text.replace("'Arial'", "'" + TESTS_FONT +"'")
expfile = path.join(self.tmp_dir, 'ghost_stroop.psyexp')
with codecs.open(expfile, 'w', encoding='utf-8-sig') as f:
f.write(text)
self.exp.loadFromXML(expfile) # reload the edited file
script = self.exp.writeScript()
# reposition its window out from under splashscreen (can't do easily from .psyexp):
script = script.replace('fullscr=False,','pos=(40,40), fullscr=False,')
# Only log errors.
script = script.replace('logging.console.setLevel(logging.WARNING',
'logging.console.setLevel(logging.ERROR')
lastrun = path.join(self.tmp_dir, 'ghost_stroop_lastrun.py')
with codecs.open(lastrun, 'w', encoding='utf-8-sig') as f:
f.write(script)
# run:
stdout, stderr = core.shellCall([sys.executable, lastrun], stderr=True)
assert not stderr
import sys
from psychopy.app._psychopyApp import PsychoPyApp, __version__
# fix OS X locale-bug on startup: sets locale to LC_ALL (must be defined!)
import psychopy.locale_setup # noqa
# NB the PsychoPyApp classes moved to _psychopyApp.py as of version 1.78.00
# to allow for better upgrading possibilities from the mac app bundle. this
# file now used solely as a launcher for the app, not as the app itself.
if __name__ == '__main__':
if '-x' in sys.argv:
# run a .py script from the command line using StandAlone python
targetScript = sys.argv[sys.argv.index('-x') + 1]
from psychopy import core
import os
core.shellCall([sys.executable, os.path.abspath(targetScript)])
sys.exit()
if '-v' in sys.argv or '--version' in sys.argv:
info = 'PsychoPy2, version %s (c)Jonathan Peirce 2015, GNU GPL license'
print(info % __version__)
sys.exit()
if '-h' in sys.argv or '--help' in sys.argv:
print("""Starts the PsychoPy2 application.
Usage: python PsychoPy.py [options] [file]
Without options or files provided this starts PsychoPy using prefs to
decide on the view(s) to open. If optional [file] is provided action
depends on the type of the [file]:
Python script 'file.py' -- opens coder
def getRAM():
"""Return system's physical RAM & available RAM, in M.
Slow on Mac and Linux; fast on Windows. psutils is good but another dep.
"""
freeRAM = 'unknown'
totalRAM = 'unknown'
if sys.platform == 'darwin':
lines = core.shellCall('vm_stat').splitlines()
pageIndex = lines[0].find('page size of ')
if pageIndex > -1:
pagesize = int(lines[0][pageIndex + len('page size of '):].split()[0])
lineFree = [ln for ln in lines if ln.startswith('Pages free')][0]
lineSpec = [ln for ln in lines if ln.startswith('Pages speculative')][0]
free = float(lineFree.split()[-1])
spec = float(lineSpec.split()[-1])
freeRAM = int((free + spec) * pagesize / 1048576.) # M
total = core.shellCall(['sysctl', 'hw.memsize']).split(':')
totalRAM = int(int(total[-1]) / 1048576.) # M
elif sys.platform == 'win32':
if not haveCtypes:
return 'unknown', 'unknown'
try:
# http://code.activestate.com/recipes/511491/
# modified by Sol Simpson for 64-bit systems (also ok for 32-bit)
kernel32 = ctypes.windll.kernel32
class MEMORYSTATUS(ctypes.Structure):
_fields_ = [
('dwLength', DWORD),
('dwMemoryLoad', DWORD),
('dwTotalPhys', DWORDLONG), # ctypes.c_ulonglong for 64-bit
('dwAvailPhys', DWORDLONG),
('dwTotalPageFile', DWORDLONG),
('dwAvailPageFile', DWORDLONG),
('dwTotalVirtual', DWORDLONG),
('dwAvailVirtual', DWORDLONG),
('ullAvailExtendedVirtual', DWORDLONG),
]
memoryStatus = MEMORYSTATUS()
memoryStatus.dwLength = ctypes.sizeof(MEMORYSTATUS)
kernel32.GlobalMemoryStatusEx(ctypes.byref(memoryStatus))
totalRAM = int(memoryStatus.dwTotalPhys / 1048576.) # M
freeRAM = int(memoryStatus.dwAvailPhys / 1048576.) # M
except:
pass
elif sys.platform.startswith('linux'):
try:
so = core.shellCall('free')
lines = so.splitlines()
freeRAM = int(int(lines[1].split()[3]) / 1024.) # M
totalRAM = int(int(lines[1].split()[1]) / 1024.)
except:
pass
else: # bsd, works on mac too
try:
total = core.shellCall('sysctl -n hw.memsize')
totalRAM = int(int(total) / 1048576.)
# not sure how to get available phys mem
except:
pass
return totalRAM, freeRAM
def _setSystemInfo(self):
"""System info
"""
# machine name
self['systemHostName'] = platform.node()
self['systemMemTotalRAM'], self['systemMemFreeRAM'] = getRAM()
# locale information:
# (None, None) -> str
loc = '.'.join([str(x) for x in locale.getlocale()])
if loc == 'None.None':
loc = locale.setlocale(locale.LC_ALL, '')
# == the locale in use, from OS or user-pref
self['systemLocale'] = loc
# platform name, etc
if sys.platform in ['darwin']:
OSXver, _junk, architecture = platform.mac_ver()
platInfo = 'darwin ' + OSXver + ' ' + architecture
# powerSource = ...
elif sys.platform.startswith('linux'):
platInfo = 'linux ' + platform.release()
# powerSource = ...
elif sys.platform in ['win32']:
platInfo = 'windowsversion=' + repr(sys.getwindowsversion())
# powerSource = ...
else:
platInfo = ' [?]'
# powerSource = ...
self['systemPlatform'] = platInfo
# self['systemPowerSource'] = powerSource
# count all unique people (user IDs logged in), and find current user
# name & UID
self['systemUser'], self['systemUserID'] = _getUserNameUID()
try:
users = shellCall("who -q").splitlines()[0].split()
self['systemUsersCount'] = len(set(users))
except Exception:
self['systemUsersCount'] = False
# when last rebooted?
try:
lastboot = shellCall("who -b").split()
self['systemRebooted'] = ' '.join(lastboot[2:])
except Exception: # windows
sysInfo = shellCall('systeminfo').splitlines()
lastboot = [line for line in sysInfo if line.startswith(
"System Up Time") or line.startswith("System Boot Time")]
lastboot += ['[?]'] # put something in the list just in case
self['systemRebooted'] = lastboot[0].strip()
# R (and r2py) for stats:
try:
Rver = shellCall(["R", "--version"])
Rversion = Rver.splitlines()[0]
if Rversion.startswith('R version'):
self['systemRavailable'] = Rversion.strip()
try:
import rpy2
self['systemRpy2'] = rpy2.__version__
except ImportError:
pass
except Exception:
pass
# encryption / security tools:
try:
vers, se = shellCall('openssl version', stderr=True)
if se:
vers = str(vers) + se.replace('\n', ' ')[:80]
if vers.strip():
self['systemSec.OpenSSLVersion'] = vers
except Exception:
pass
try:
so = shellCall(['gpg', '--version'])
if so.find('GnuPG') > -1:
self['systemSec.GPGVersion'] = so.splitlines()[0]
_home = [line.replace('Home:', '').lstrip()
for line in so.splitlines()
if line.startswith('Home:')]
self['systemSec.GPGHome'] = ''.join(_home)
except Exception:
pass
try:
import ssl
self['systemSec.pythonSSL'] = True
except ImportError:
self['systemSec.pythonSSL'] = False
# pyo for sound:
if PY3:
import importlib.util
if importlib.util.find_spec('pyo') is not None:
self['systemPyoVersion'] = '-'
else:
import imp
try:
imp.find_module('pyo')
self['systemPyoVersion'] = '-'
except:
pass
# try:
# travis = bool(str(os.environ.get('TRAVIS')).lower() == 'true')
# assert not travis # skip sound-related stuff on travis-ci.org
#
# import pyo
# self['systemPyoVersion'] = '%i.%i.%i' % pyo.getVersion()
# try:
# # requires pyo svn r1024 or higher:
# import psychopy.sound
# inp, out = psychopy.sound.get_devices_infos()
# for devList in [inp, out]:
# for key in devList:
# if isinstance(devList[key]['name'], str):
# devList[key]['name'] = devList[key]['name']
# self['systemPyo.InputDevices'] = inp
# self['systemPyo.OutputDevices'] = out
# except AttributeError:
# pass
# except (AssertionError, ImportError):
# pass
# flac (free lossless audio codec) for google-speech:
flacv = ''
if sys.platform == 'win32':
flacexe = 'C:\\Program Files\\FLAC\\flac.exe'
if os.path.exists(flacexe):
flacv = core.shellCall(flacexe + ' --version')
else:
flac, se = core.shellCall('which flac', stderr=True)
if not se and flac and not flac.find('Command not found') > -1:
flacv = core.shellCall('flac --version')
if flacv:
self['systemFlacVersion'] = flacv
# detect internet access or fail quickly:
# web.setupProxy() & web.testProxy(web.proxies) # can be slow
# to fail if there's no connection
self['systemHaveInternetAccess'] = web.haveInternetAccess()
if not self['systemHaveInternetAccess']:
self['systemHaveInternetAccess'] = 'False (proxies not attempted)'
def _setCurrentProcessInfo(self, verbose=False, userProcsDetailed=False):
"""What other processes are currently active for this user?
"""
appFlagList = [
# flag these apps if active, case-insensitive match:
# web browsers can burn CPU cycles
'Firefox', 'Safari', 'Explorer', 'Netscape', 'Opera',
'Google Chrome',
# but also matches iTunesHelper (add to ignore-list)
'Dropbox', 'BitTorrent', 'iTunes',
'mdimport', 'mdworker', 'mds', # can have high CPU
# productivity; on mac, MS Office (Word etc) can be launched by
# 'LaunchCFMApp'
'Office', 'KeyNote', 'Pages', 'LaunchCFMApp',
'Skype',
'VirtualBox', 'VBoxClient', # virtual machine as host or client
'Parallels', 'Coherence', 'prl_client_app', 'prl_tools_service',
'VMware'] # just a guess
appIgnoreList = [ # always ignore these, exact match:
'ps', 'login', '-tcsh', 'bash', 'iTunesHelper']
# assess concurrently active processes owner by the current user:
try:
# ps = process status, -c to avoid full path (potentially having
# spaces) & args, -U for user
if sys.platform not in ['win32']:
proc = shellCall("ps -c -U " + os.environ['USER'])
else:
# "tasklist /m" gives modules as well
proc, err = shellCall("tasklist", stderr=True)
if err:
logging.error('tasklist error:', err)
# raise
systemProcPsu = []
systemProcPsuFlagged = []
systemUserProcFlaggedPID = []
procLines = proc.splitlines()
headerLine = procLines.pop(0) # column labels
if sys.platform not in ['win32']:
try:
# columns and column labels can vary across platforms
cmd = headerLine.upper().split().index('CMD')
except ValueError:
cmd = headerLine.upper().split().index('COMMAND')
# process id's extracted in case you want to os.kill() them
# from psychopy
pid = headerLine.upper().split().index('PID')
else: # this works for win XP, for output from 'tasklist'
procLines.pop(0) # blank
procLines.pop(0) # =====
pid = -5 # pid next after command, which can have
# command is first, but can have white space, so end up taking
# line[0:pid]
cmd = 0
for p in procLines:
pr = p.split() # info fields for this process
if pr[cmd] in appIgnoreList:
continue
if sys.platform in ['win32']: # allow for spaces in app names
# later just count these unless want details
systemProcPsu.append([' '.join(pr[cmd:pid]), pr[pid]])
else:
systemProcPsu.append([' '.join(pr[cmd:]), pr[pid]])
matchingApp = [
a for a in appFlagList if a.lower() in p.lower()]
for app in matchingApp:
systemProcPsuFlagged.append([app, pr[pid]])
systemUserProcFlaggedPID.append(pr[pid])
self['systemUserProcCount'] = len(systemProcPsu)
self['systemUserProcFlagged'] = systemProcPsuFlagged
if verbose and userProcsDetailed:
self['systemUserProcCmdPid'] = systemProcPsu
self['systemUserProcFlaggedPID'] = systemUserProcFlaggedPID
except Exception:
if verbose:
self['systemUserProcCmdPid'] = None
self['systemUserProcFlagged'] = None
# CPU speed (will depend on system busy-ness)
d = numpy.array(numpy.linspace(0., 1., 1000000))
t0 = core.getTime()
numpy.std(d)
t = core.getTime() - t0
del d
self['systemTimeNumpySD1000000_sec'] = t