def test_get_shifted_base():
data = np.random.random((6, 7))
tile_origin = np.array((0, 0))
tile_shape = np.array((6, 7))
target_tup, offsets = get_shifted(
arr_shape=np.array(data.shape),
tile_origin=tile_origin,
tile_shape=tile_shape,
shift=np.array((0, 0))
)
print(target_tup)
print(offsets)
(target_slice, source_slice) = to_slices(target_tup, offsets)
print(target_slice, source_slice)
res = np.full(tile_shape, 17, dtype=data.dtype)
res[target_slice] = data[source_slice]
print("result:", res)
print("data:", data)
assert np.all(res == data)
assert res.dtype == data.dtype
assert res.shape == data.shape
def test_get_shifted_minus_partial():
data_shape = np.array((6, 7))
data = np.random.random(data_shape)
tile_origin = np.array((1, 2))
tile_shape = np.array((3, 4))
target_tup, offsets = get_shifted(
arr_shape=np.array(data.shape),
tile_origin=tile_origin,
tile_shape=tile_shape,
shift=np.array((-1, -2))
)
print(target_tup)
print(offsets)
(target_slice, source_slice) = to_slices(target_tup, offsets)
res = np.full(tile_shape, 17, dtype=data.dtype)
res[target_slice] = data[source_slice]
print("result:", res)
print("data:", data)
assert np.all(res == data[:3, :4])
assert res.dtype == data.dtype
def test_get_shifted_plus():
data_shape = np.array((4, 5))
data = np.random.random(data_shape)
tile_origin = np.array((0, 0))
tile_shape = data_shape
target_tup, offsets = get_shifted(
arr_shape=np.array(data.shape),
tile_origin=tile_origin,
tile_shape=tile_shape,
shift=np.array((1, 2))
)
print(target_tup)
print(offsets)
(target_slice, source_slice) = to_slices(target_tup, offsets)
res = np.full(tile_shape, 17, dtype=data.dtype)
res[target_slice] = data[source_slice]
print("result:", res)
print("data:", data)
assert np.all(res[:-1, :-2] == data[1:, 2:])
assert np.all(res[-1:] == 17)
assert np.all(res[:, -2:] == 17)
assert res.dtype == data.dtype
assert res.shape == data.shape
def mask_tile_pair(center_tile, tile_origin, tile_shape, filter_center, sy,
sx):
'''
Numerical work horse for :meth:`mask_pair_shift`, including tiling support.
The tiling support could be used to calculate the mask stack on the fly,
including support for UDF.process_tile().
Parameters
----------
center_tile : numpy.ndarray
Tile cut out from :code:`filter_center` for re-use to increase efficiency
tile_origin : tuple
Origin of the tile to calculate
tile_shape : tuple
Shape of the tile
filter_center : numpy.ndarray
Center illumination, i.e. zero order disk.
sy, sx : float
Trotter shift value in px
Returns
-------
mask_positive : numpy.ndarray
Positive trotter tile
target_tup_p : numpy.ndarray of int
Start and stop indices per axis that were used for shifting the positive trotter tile.
offsets_p : numpy.ndarray
Offsets per axis that were used for shifting the positive trotter tile.
mask_negative : numpy.ndarray
Negative trotter tile
target_tup_n : numpy.ndarray
Start and stop indices per axis that were used for shifting the negative trotter tile.
offsets_n : numpy.ndarray
Offsets per axis that were used for shifting the negative trotter tile.
'''
sy, sx, = np.int(np.round(sy)), np.int(np.round(sx))
positive_tile = np.zeros_like(center_tile)
negative_tile = np.zeros_like(center_tile)
# We get from negative coordinates,
# that means it looks like shifted to positive
target_tup_p, offsets_p = get_shifted(arr_shape=np.array(
filter_center.shape),
tile_origin=tile_origin,
tile_shape=tile_shape,
shift=np.array((-sy, -sx)))
# We get from positive coordinates,
# that means it looks like shifted to negative
target_tup_n, offsets_n = get_shifted(arr_shape=np.array(
filter_center.shape),
tile_origin=tile_origin,
tile_shape=tile_shape,
shift=np.array((sy, sx)))
sta_y, sto_y, sta_x, sto_x = target_tup_p.flatten()
off_y, off_x = offsets_p
positive_tile[sta_y:sto_y,
sta_x:sto_x] = filter_center[sta_y + off_y:sto_y + off_y,
sta_x + off_x:sto_x + off_x]
sta_y, sto_y, sta_x, sto_x = target_tup_n.flatten()
off_y, off_x = offsets_n
negative_tile[sta_y:sto_y,
sta_x:sto_x] = filter_center[sta_y + off_y:sto_y + off_y,
sta_x + off_x:sto_x + off_x]
mask_positive = center_tile * positive_tile * (negative_tile == 0)
mask_negative = center_tile * negative_tile * (positive_tile == 0)
return (mask_positive, target_tup_p, offsets_p, mask_negative,
target_tup_n, offsets_n)