result.volume = self.volume + other.volume
mass1 = self.concentration * self.volume
mass2 = other.concentration * other.volume
result.concentration = (mass1 + mass2) / result.volume
return result
def split(self):
d1, d2 = super().split()
d1.volume = self.volume / 2
d2.volume = self.volume / 2
d1.concentration = self.concentration
d2.concentration = self.concentration
return d1, d2
arch_path = project_path('tests/arches/arch-big.json')
with mk_session(arch_path) as session:
# FIXME this needs arch big for now because place and route is bad
# also, you just can't do that many iterations
c_low = 0
c_high = 1
c_target = .37
eps = 0.1
def d_low_factory():
return session.create(
location=None,
volume=1,
dimensions=None,
# no test
from puddle import mk_session, project_path
# def thermocycle(droplet, temps_and_times):
arch_path = project_path('tests/arches/purpledrop-thermocycle.yaml')
with mk_session(arch_path) as session:
# a = session.input('water', volume=15.0, dimensions=(1,1))
# a.move((2,2))
# session._flush()
a = session.create(location=(14, 5), volume=1.0, dimensions=(1, 1))
for i in range(10):
print('python loop ', i)
if i > 0:
a = session.heat(a, temp=98, seconds=200)
print('post 98 volume: ', a.volume())
if a.volume() < 1.0:
r = session.input('water', volume=15, dimensions=(1, 1))
session._flush()
a = session.combine_into(a, r)
a = session.heat(a, temp=62, seconds=30)
print('post 62 volume: ', a.volume())
a = session.heat(a, temp=72, seconds=20)
print('post 72 volume: ', a.volume())
# initial_volume = c.volume()
# from https://docs.python.org/3.6/library/readline.html#example
class HistoryConsole(code.InteractiveConsole):
def __init__(self,
locals=None,
filename="<console>",
histfile=os.path.expanduser("~/.console-history")):
code.InteractiveConsole.__init__(self, locals, filename)
self.init_history(histfile)
def init_history(self, histfile):
readline.parse_and_bind("tab: complete")
if hasattr(readline, "read_history_file"):
try:
readline.read_history_file(histfile)
except IOError:
pass
atexit.register(self.save_history, histfile)
def save_history(self, histfile):
readline.set_history_length(1000)
readline.write_history_file(histfile)
arch_path = project_path('tests/arches/purpledrop.yaml')
with mk_session(arch_path) as session:
HistoryConsole(locals=session.prelude()).interact()
print(session.droplets())
result.volume = self.volume + other.volume
mass1 = self.concentration * self.volume
mass2 = other.concentration * other.volume
result.concentration = (mass1 + mass2) / result.volume
return result
def split(self):
d1, d2 = super().split()
d1.volume = self.volume / 2
d2.volume = self.volume / 2
d1.concentration = self.concentration
d2.concentration = self.concentration
return d1, d2
arch_path = project_path('tests/arches/arch-big.yaml')
with mk_session(arch_path) as session:
# FIXME this needs arch big for now because place and route is bad
# also, you just can't do that many iterations
c_low = 0
c_high = 1
c_target = .25
eps = 0.1
def d_low_factory():
return session.create(
location=None,
volume=1,
dimensions=None,
def session():
arch_path = puddle.project_path('tests/arches/arch01.json')
with puddle.mk_session(arch_path) as sess:
yield sess
corners = [corner1, corner2, corner3, corner4]
def try_move(d, corner):
try:
old_id = d._id
d.move(corner[0])
session._flush()
except puddle.SessionError:
corner.pop(0)
d._id = old_id
d.valid = True
print("python: ERROR")
arch_path = puddle.project_path('tests/arches/purpledrop.json')
def endurance(session):
globals().update(session.prelude())
d = create((6, 6))
for i in range(100):
for j, c in enumerate(corners):
if not c:
print("python: corners{} is empty!".format(j))
return
try_move(d, corner1)
try_move(d, corner2)
# no test
from puddle import mk_session, project_path
arch_path = project_path('tests/arches/purpledrop-nanopore.yaml')
with mk_session(arch_path) as session:
dna = session.create(location=(1, 0), volume=10.0, dimensions=(1, 1))
session._flush()
buf = session.input('buffer', volume=350.0, dimensions=(2, 2))
session._flush()
mixture = session.mix(dna, buf)
session._flush()
session.output('minion', mixture)
session._flush()
def setUp(self):
arch_path = puddle.project_path('tests/arches/arch01.yaml')
session = puddle.mk_session(arch_path)
self.session = session.__enter__()
self.addCleanup(session.__exit__, None, None, None)
