def createOutputStep(self):
if os.path.exists(self._getFileName('out_vol3DFSC')):
inputVol = self.inputVolume.get()
vol = Volume()
vol.setObjLabel('3D FSC')
vol.setFileName(self._getFileName('out_vol3DFSC'))
vol.setSamplingRate(inputVol.getSamplingRate())
# remove useless output
cleanPath(self._getExtraPath('Results_vol/ResEMvolOut.mrc'))
self._defineOutputs(outputVolume=vol)
self._defineSourceRelation(self.inputVolume, vol)
def createOutputStep(self):
partSet = self._getInputParticles()
vol = Volume()
vol.setSamplingRate(partSet.getSamplingRate())
vol.setObjLabel('real space PSF')
vol.setFileName(self._getFileName('real space PSF'))
vol2 = Volume()
vol2.setSamplingRate(partSet.getSamplingRate())
vol2.setObjLabel('fourier space PSF')
vol2.setFileName(self._getFileName('fourier space PSF'))
outputs = {'outputVolume1': vol, 'outputVolume2': vol2}
self._defineOutputs(**outputs)
self._defineSourceRelation(self.inputParticles, vol)
self._defineSourceRelation(self.inputParticles, vol2)
def createOutputStep(self):
inputVol = self.protRefine.get().outputVolume
ps = inputVol.getSamplingRate()
vol = Volume()
vol.setSamplingRate(ps)
vol.setObjLabel('Filtered half-map 1')
vol.setFileName(self._getFileName('outHalf1Fn'))
vol2 = Volume()
vol2.setSamplingRate(ps)
vol2.setObjLabel('Filtered half-map 2')
vol2.setFileName(self._getFileName('outHalf2Fn'))
outputs = {'outputVolume1': vol, 'outputVolume2': vol2}
self._defineOutputs(**outputs)
self._defineSourceRelation(inputVol, vol)
self._defineSourceRelation(inputVol, vol2)