def set_ponifile(self, ponifile=None):
if ponifile is None:
ponifile = self.poni.text()
print ponifile
try:
self.ai = pyFAI.load(ponifile)
except Exception as error:
logger.error("file %s does not look like a poni-file, error %s" %
(ponifile, error))
return
self.pixel1.setText(str_(self.ai.pixel1))
self.pixel2.setText(str_(self.ai.pixel2))
self.dist.setText(str_(self.ai.dist))
self.poni1.setText(str_(self.ai.poni1))
self.poni2.setText(str_(self.ai.poni2))
self.rot1.setText(str_(self.ai.rot1))
self.rot2.setText(str_(self.ai.rot2))
self.rot3.setText(str_(self.ai.rot3))
self.splineFile.setText(str_(self.ai.detector.splineFile))
self.wavelength.setText(str_(self.ai._wavelength))
name = self.ai.detector.name.lower()
if name in self.all_detectors:
self.detector.setCurrentIndex(self.all_detectors.index(name))
else:
self.detector.setCurrentIndex(self.all_detectors.index("detector"))
def select_flatfield(self):
logger.debug("select_flatfield")
flatfield = str(QtGui.QFileDialog.getOpenFileName())
if flatfield:
self.flat_field.setText(str_(flatfield))
self.do_flat.setChecked(True)
if is_hdf5(flatfield):
path = HDF5Dialog.getPath(flatfield)
self.flat_field_hdf5.setText(path or "")
def select_darkcurrent(self):
logger.debug("select_darkcurrent")
darkcurrent = str(QtGui.QFileDialog.getOpenFileName())
if darkcurrent:
self.dark_current.setText(str_(darkcurrent))
self.do_dark.setChecked(True)
if is_hdf5(darkcurrent):
path = HDF5Dialog.getPath(darkcurrent)
self.dark_current_hdf5.setText(path or "")
def select_flatfield(self):
logger.debug("select_flatfield")
flatfield = str(QtGui.QFileDialog.getOpenFileName())
if flatfield:
self.flat_field.setText(str_(flatfield))
self.do_flat.setChecked(True)
if is_hdf5(flatfield):
path = HDF5Dialog.getPath(flatfield)
self.flat_field_hdf5.setText(path or "")
def select_darkcurrent(self):
logger.debug("select_darkcurrent")
darkcurrent = str(QtGui.QFileDialog.getOpenFileName())
if darkcurrent:
self.dark_current.setText(str_(darkcurrent))
self.do_dark.setChecked(True)
if is_hdf5(darkcurrent):
path = HDF5Dialog.getPath(darkcurrent)
self.dark_current_hdf5.setText(path or "")
def set_ponifile(self, ponifile=None):
if ponifile is None:
ponifile = self.poni.text()
print ponifile
try:
self.ai = pyFAI.load(ponifile)
except Exception as error:
logger.error("file %s does not look like a poni-file, error %s" % (ponifile, error))
return
self.pixel1.setText(str_(self.ai.pixel1))
self.pixel2.setText(str_(self.ai.pixel2))
self.dist.setText(str_(self.ai.dist))
self.poni1.setText(str_(self.ai.poni1))
self.poni2.setText(str_(self.ai.poni2))
self.rot1.setText(str_(self.ai.rot1))
self.rot2.setText(str_(self.ai.rot2))
self.rot3.setText(str_(self.ai.rot3))
self.splineFile.setText(str_(self.ai.detector.splineFile))
self.wavelength.setText(str_(self.ai._wavelength))
name = self.ai.detector.name.lower()
if name in self.all_detectors:
self.detector.setCurrentIndex(self.all_detectors.index(name))
else:
self.detector.setCurrentIndex(self.all_detectors.index("detector"))
def dump(self, filename=None):
"""
Reads all parameters and returns them as a python dictionary
@param filename: dump the content to a file as a JSON string
@return: dictionary
"""
logger.debug("InputWidget.dump")
res = {}
res["wavelength"] = float_(self.wavelength.text()) * 1e-10
calibrant = {"do_dspacing": bool(self.do_dspacing.isChecked())}
calibrant["file"] = str_(self.dspacing.text()).strip()
calibrant["calibrant"] = str_(self.detector.currentText())
res["calibrant"] = calibrant
detector = {"name": str_(self.detector.currentText()),
"file":str(self.detectorfile.text()).strip(),
"pixel1": float_(self.pixel1.text()),
"pixel2":float_(self.pixel2.text())}
res[detector] = detector
data = {"file": str_(self.data_file.text()).strip(),
"hdf5": str_(self.data_file_hdf5.text()).strip() or None}
res["data"] = data
mask = {"file": str_(self.mask_file.text()).strip(),
"hdf5": str_(self.mask_file_hdf5.text()).strip() or None,
"apply": bool(self.do_mask.isChecked())}
res["mask"] = mask
dark = {"file": str_(self.dark_current.text()).strip(),
"hdf5": str_(self.dark_file_hdf5.text()).strip() or None,
"apply": bool(self.do_dark.isChecked())}
res["dark"] = dark
flat = {"file": str_(self.flat_field.text()).strip(),
"hdf5": str_(self.flat_file_hdf5.text()).strip() or None,
"apply": bool(self.do_flat.isChecked())}
res["flat"] = flat
try:
with open(filename, "w") as myFile:
json.dump(res, myFile, indent=4)
except IOError as error:
logger.error("Error while saving config: %s" % error)
else:
logger.debug("Saved")
return res
def select_flatfield(self):
logger.debug("select_flatfield")
flatfield = str(QtGui.QFileDialog.getOpenFileName())
if flatfield:
self.flat_field.setText(str_(flatfield))
self.do_flat.setChecked(True)
def select_darkcurrent(self):
logger.debug("select_darkcurrent")
darkcurrent = str(QtGui.QFileDialog.getOpenFileName())
if darkcurrent:
self.dark_current.setText(str_(darkcurrent))
self.do_dark.setChecked(True)
def restore(self, filename=".azimint.json"):
"""
restore from JSON file the status of the current widget
@param filename: path where the config was saved
@type filename: str
"""
logger.debug("Restore")
if not os.path.isfile(filename):
logger.error("No such file: %s" % filename)
return
data = json.load(open(filename))
setup_data = { "poni": self.poni.setText,
# "detector": self.all_detectors[self.detector.getCurrentIndex()],
"wavelength":lambda a:self.wavelength.setText(str_(a)),
"splineFile":lambda a:self.splineFile.setText(str_(a)),
"pixel1":lambda a: self.pixel1.setText(str_(a)),
"pixel2":lambda a:self.pixel2.setText(str_(a)),
"dist":lambda a:self.dist.setText(str_(a)),
"poni1":lambda a:self.poni1.setText(str_(a)),
"poni2":lambda a:self.poni2.setText(str_(a)),
"rot1":lambda a:self.rot1.setText(str_(a)),
"rot2":lambda a:self.rot2.setText(str_(a)),
"rot3":lambda a:self.rot3.setText(str_(a)),
"do_dummy": self.do_dummy.setChecked,
"do_dark": self.do_dark.setChecked,
"do_flat": self.do_flat.setChecked,
"do_polarization": self.do_polarization.setChecked,
"val_dummy":lambda a: self.val_dummy.setText(str_(a)),
"delta_dummy":lambda a: self.delta_dummy.setText(str_(a)),
"do_mask": self.do_mask.setChecked,
"mask_file":lambda a:self.mask_file.setText(str_(a)),
"dark_current":lambda a:self.dark_current.setText(str_(a)),
"flat_field":lambda a:self.flat_field.setText(str_(a)),
"polarization_factor":self.polarization_factor.setValue,
"rad_pt":lambda a:self.rad_pt.setText(str_(a)),
"do_2D":self.do_2D.setChecked,
"azim_pt":lambda a:self.azim_pt.setText(str_(a)),
"chi_discontinuity_at_0": self.chi_discontinuity_at_0.setChecked,
"do_radial_range": self.do_radial_range.setChecked,
"do_azimuthal_range": self.do_azimuthal_range.setChecked,
"do_poisson": self.do_poisson.setChecked,
"radial_range_min":lambda a:self.radial_range_min.setText(str_(a)),
"radial_range_max":lambda a:self.radial_range_max.setText(str_(a)),
"azimuth_range_min":lambda a:self.azimuth_range_min.setText(str_(a)),
"azimuth_range_max":lambda a:self.azimuth_range_max.setText(str_(a)),
"do_solid_angle": self.do_solid_angle.setChecked,
}
for key, value in setup_data.items():
if key in data:
value(data[key])
if "unit" in data:
unit = data["unit"].lower()
if unit == "q_nm^-1":
self.q_nm.setChecked(1)
elif unit == "q_A^-1":
self.q_A.setChecked(1)
elif unit == "2th_deg":
self.tth_deg.setChecked(1)
elif unit == "2th_rad":
self.tth_rad.setChecked(1)
elif unit == "r_mm":
self.r_mm.setChecked(1)
if "detector" in data:
detector = data["detector"].lower()
if detector in self.all_detectors:
self.detector.setCurrentIndex(self.all_detectors.index(detector))
def dump(self, filename=None):
"""
Reads all parameters and returns them as a python dictionary
@param filename: dump the content to a file as a JSON string
@return: dictionary
"""
logger.debug("InputWidget.dump")
res = {}
res["wavelength"] = float_(self.wavelength.text()) * 1e-10
calibrant = {"do_dspacing": bool(self.do_dspacing.isChecked())}
calibrant["file"] = str_(self.dspacing.text()).strip()
calibrant["calibrant"] = str_(self.detector.currentText())
res["calibrant"] = calibrant
detector = {
"name": str_(self.detector.currentText()),
"file": str(self.detectorfile.text()).strip(),
"pixel1": float_(self.pixel1.text()),
"pixel2": float_(self.pixel2.text())
}
res[detector] = detector
data = {
"file": str_(self.data_file.text()).strip(),
"hdf5": str_(self.data_file_hdf5.text()).strip() or None
}
res["data"] = data
mask = {
"file": str_(self.mask_file.text()).strip(),
"hdf5": str_(self.mask_file_hdf5.text()).strip() or None,
"apply": bool(self.do_mask.isChecked())
}
res["mask"] = mask
dark = {
"file": str_(self.dark_current.text()).strip(),
"hdf5": str_(self.dark_file_hdf5.text()).strip() or None,
"apply": bool(self.do_dark.isChecked())
}
res["dark"] = dark
flat = {
"file": str_(self.flat_field.text()).strip(),
"hdf5": str_(self.flat_file_hdf5.text()).strip() or None,
"apply": bool(self.do_flat.isChecked())
}
res["flat"] = flat
try:
with open(filename, "w") as myFile:
json.dump(res, myFile, indent=4)
except IOError as error:
logger.error("Error while saving config: %s" % error)
else:
logger.debug("Saved")
return res
def qfile_path_handl(self):
self.load_img(str_(self.qfile_path.text()))
def select_flatfield(self):
logger.debug("select_flatfield")
flatfield = str(QtGui.QFileDialog.getOpenFileName())
if flatfield:
self.flat_field.setText(str_(flatfield))
self.do_flat.setChecked(True)
def select_darkcurrent(self):
logger.debug("select_darkcurrent")
darkcurrent = str(QtGui.QFileDialog.getOpenFileName())
if darkcurrent:
self.dark_current.setText(str_(darkcurrent))
self.do_dark.setChecked(True)
def restore(self, filename=".azimint.json"):
"""
restore from JSON file the status of the current widget
@param filename: path where the config was saved
@type filename: str
"""
logger.debug("Restore")
if not op.isfile(filename):
logger.error("No such file: %s" % filename)
return
data = json.load(open(filename))
setup_data = {
"poni": self.poni.setText,
# "detector": self.all_detectors[self.detector.getCurrentIndex()],
"wavelength": lambda a: self.wavelength.setText(str_(a)),
"splineFile": lambda a: self.splineFile.setText(str_(a)),
"pixel1": lambda a: self.pixel1.setText(str_(a)),
"pixel2": lambda a: self.pixel2.setText(str_(a)),
"dist": lambda a: self.dist.setText(str_(a)),
"poni1": lambda a: self.poni1.setText(str_(a)),
"poni2": lambda a: self.poni2.setText(str_(a)),
"rot1": lambda a: self.rot1.setText(str_(a)),
"rot2": lambda a: self.rot2.setText(str_(a)),
"rot3": lambda a: self.rot3.setText(str_(a)),
"do_dummy": self.do_dummy.setChecked,
"do_dark": self.do_dark.setChecked,
"do_flat": self.do_flat.setChecked,
"do_polarization": self.do_polarization.setChecked,
"val_dummy": lambda a: self.val_dummy.setText(str_(a)),
"delta_dummy": lambda a: self.delta_dummy.setText(str_(a)),
"do_mask": self.do_mask.setChecked,
"mask_file": lambda a: self.mask_file.setText(str_(a)),
"dark_current": lambda a: self.dark_current.setText(str_(a)),
"flat_field": lambda a: self.flat_field.setText(str_(a)),
"polarization_factor": self.polarization_factor.setValue,
"rad_pt": lambda a: self.rad_pt.setText(str_(a)),
"do_2D": self.do_2D.setChecked,
"azim_pt": lambda a: self.azim_pt.setText(str_(a)),
"chi_discontinuity_at_0": self.chi_discontinuity_at_0.setChecked,
"do_radial_range": self.do_radial_range.setChecked,
"do_azimuthal_range": self.do_azimuthal_range.setChecked,
"do_poisson": self.do_poisson.setChecked,
"radial_range_min":
lambda a: self.radial_range_min.setText(str_(a)),
"radial_range_max":
lambda a: self.radial_range_max.setText(str_(a)),
"azimuth_range_min":
lambda a: self.azimuth_range_min.setText(str_(a)),
"azimuth_range_max":
lambda a: self.azimuth_range_max.setText(str_(a)),
"do_solid_angle": self.do_solid_angle.setChecked,
}
for key, value in setup_data.items():
if key in data:
value(data[key])
if "unit" in data:
unit = data["unit"].lower()
if unit == "q_nm^-1":
self.q_nm.setChecked(1)
elif unit == "q_A^-1":
self.q_A.setChecked(1)
elif unit == "2th_deg":
self.tth_deg.setChecked(1)
elif unit == "2th_rad":
self.tth_rad.setChecked(1)
elif unit == "r_mm":
self.r_mm.setChecked(1)
if "detector" in data:
detector = data["detector"].lower()
if detector in self.all_detectors:
self.detector.setCurrentIndex(
self.all_detectors.index(detector))