def setUp(self):
(self.image, self.labels, self.binary, self.stack) = generate_image()
self.network = generate_probe_graph()
self.regions = generate_regions()
self.segments = [
ProbeSegment(region=region) for region in self.regions
]
def setUp(self):
self.regions = generate_regions()
self.fibre_network = ProbeFibreNetwork()
self.fibres = [ProbeFibre(), ProbeFibre(), ProbeFibre()]
self.segment = ProbeSegment()
self.segments = [self.segment]
self.image, _, _, _ = generate_image()
def setUp(self):
self.image, _, _, _ = generate_image()
self.network = generate_probe_graph()
self.pos_2D = np.array([[1, 3], [4, 2], [1, 5]])
self.answer_d_2D = np.array([[[0, 0], [3, -1], [0, 2]],
[[-3, 1], [0, 0], [-3, 3]],
[[0, -2], [3, -3], [0, 0]]])
self.answer_r2_2D = np.array([[0, 10, 4], [10, 0, 18], [4, 18, 0]])
self.answer_cos_the = np.array([0, 0.9486833])
def setUp(self):
(self.image, labels, self.binary, _) = generate_image()
self.segments = regionprops(labels)
self.fibre_network = ProbeFibreNetwork()