def main():
# define input directory containing file sto be stacked
dir_in = '/...'
# define output file name
dstfile = '/.../x'
# shapefile (for stack boundaries)
shp = '/../x.shp'
# store results in separate files or one single stack file? If separate then dstfile is used as a directory.
sep = True
# list files to be resampled; those not overlapping with the shapefile geometry will excluded by function stack
srcfiles = finder(dir_in, ['S1*_VV_*norm_db.tif'])
# check whether dstfile is already a file
if os.path.isfile(dstfile):
raise IOError('dstfile already exists')
# create groups of similar time stamps for mosaicking.
# All images with a time stamp of less than 30s difference will be grouped
groups = groupbyTime(srcfiles, seconds, 30)
# final function call
# groups will be mosaicked first
# the resulting images will all have the same extent
stack(srcfiles=groups, dstfile=dstfile, resampling='bilinear',
targetres=[20, 20], srcnodata=-99, dstnodata=-99,
shapefile=shp, sortfun=seconds, separate=sep, overwrite=False)
def test_groupbyTime():
filenames = ['S1__IW___A_20151212T120000',
'S1__IW___A_20151212T120100',
'S1__IW___A_20151212T120300']
groups = anc.groupbyTime(filenames, anc.seconds, 60)
print(groups)
assert len(groups) == 2
assert isinstance(groups[0], list)
assert len(groups[0]) == 2
filenames = ['S1__IW___A_20151212T120000',
'S1__IW___A_20151212T120100',
'S1__IW___A_20151212T120200']
groups = anc.groupbyTime(filenames, anc.seconds, 60)
print(groups)
assert len(groups[0]) == 3
def main():
dirs = [
"stack_savi"
] #, "stack_ndvi", "stack_msavi", "stack_reip", "stack_rvi", "stack_dvi"]
resolution = [30, 30]
# shapefile (for stack boundaries)
shp = 'F:/geodata/geo402/02_features/LADYBRAND_final_enlarged_study_area.shp'
# store results in separate files or one single stack file? If separate then dstfile is used as a directory.
sep = True
for dir in dirs:
# define input directory containing files to be stacked
dir_in = 'F:/geodata/geo402/S2/xx_S2_indices/' + dir
print(dir_in)
os.makedirs(dir_in, exist_ok=True)
# define output file name
dstfile = 'F:/geodata/geo402/S2/xx_S2_indices/mosaics/' + dir
print(dstfile)
# list files to be resampled; those not overlapping with the shapefile geometry will excluded by function stack
srcfiles = finder(dir_in, ['*'])
# check whether dstfile is already a file
if os.path.isfile(dstfile):
raise IOError('dstfile already exists')
# create groups of similar time stamps for mosaicking.
# All images with a time stamp of less than 30s difference will be grouped
groups = groupbyTime(srcfiles, seconds, 30)
# final function call
# groups will be mosaicked first
# the resulting images will all have the same extent
stack(srcfiles=groups,
dstfile=dstfile,
resampling='bilinear',
targetres=resolution,
srcnodata=-9999,
dstnodata=-9999,
shapefile=shp,
sortfun=seconds,
separate=sep,
overwrite=True)
def main():
'''
both polarisations are included in the script but are stored in different folders
'''
resolution = [30, 30]
# shapefile (for stack boundaries)
shp = 'F:/geodata/geo402/##study_area/LADYBRAND_final_enlarged_study_area.shp'
# store results in separate files or one single stack file? If separate then dstfile is used as a directory.
sep = False
# define input directory containing files to be stacked
dir_in = 'F:/geodata/geo402/S1_GRD/xx_new/GRD_VH_vrts/'
print(dir_in)
# os.makedirs(dir_in, exist_ok=True)
# define output file name
dstfile = 'F:/geodata/geo402/S1_GRD/xx_new/S1A_IW_GRD_VH_stack'
print(dstfile)
# list files to be resampled; those not overlapping with the shapefile geometry will excluded by function stack
srcfiles = finder(dir_in, ['*'])
# check whether dstfile is already a file
if os.path.isfile(dstfile):
raise IOError('dstfile already exists')
# create groups of similar time stamps for mosaicking.
# All images with a time stamp of less than 30s difference will be grouped
groups = groupbyTime(srcfiles, seconds, 30)
# final function call
# groups will be mosaicked first
# the resulting images will all have the same extent
stack(srcfiles=groups,
dstfile=dstfile,
resampling='bilinear',
targetres=resolution,
srcnodata=-99,
dstnodata=-99,
shapefile=shp,
sortfun=seconds,
separate=sep,
overwrite=True,
cores=7)