def CheckInputFile(self, inputfile, hdfsinputdir, outputdir, force, uncompress):
input_file_list = ""
if (inputfile.endswith(".gz") and uncompress):
input_filename = os.path.basename(inputfile).replace(".gz","")
else:
input_filename = os.path.basename(inputfile)
pyutil.printDebug(1, "Processing input " + input_filename + "\n")
# Copy the input data to HDFS
# Check that the input data exists and move to HDFS if necessary.
hdfsinputfile = hdfsinputdir + "/" + input_filename
if (not self.CheckHDFSFile(hdfsinputfile) or force):
pyutil.printInfo("Regenerating HDFS input: " + hdfsinputfile)
if (not self.CheckHDir(hdfsinputdir)):
pyutil.runCommand(self.hadoopmkdir_ + hdfsinputdir)
if (inputfile.endswith(".gz") and uncompress):
new_input = outputdir + "/" + input_filename
unzipcmd = "gunzip -c " + inputfile + " > " + new_input
if (pyutil.runCommand(unzipcmd) != 0):
pyutil.printError(12, "Unable to unzip file: " + inputfile)
pyutil.runCommand(self.hadoopmove_ + new_input + " " + hdfsinputdir)
input_file_list += " --input " + hdfsinputdir + "/" + input_filename
else:
pyutil.runCommand(self.hadoopput_ + inputfile + " " + hdfsinputdir)
input_file_list += " --input " + hdfsinputdir + "/" + input_filename
if (not self.CheckHDFSFile(hdfsinputfile)):
pyutil.printError(10, "Unable to create input on HDFS: " + hdfsinputfile)
else:
input_file_list += " --input " + hdfsinputdir + "/" + input_filename
pyutil.printDebug(5, "Found file on HDFS: " + hdfsinputdir + "/" + input_filename)
return input_file_list
def RunMR(self, input_files, outputdir, reduce_tasks, reducer, mapper, mroptions):
mr_str = self.hadoopmr_
if (mroptions):
mr_str += mroptions + " "
mr_str += self.hadooplibpath_ + input_files
if not reducer:
mr_str += " -numReduceTasks 0 --reducer None "
#mr_str += " -numReduceTasks 100 --reducer cat "
else:
if (int(reduce_tasks) >= 0):
mr_str += " -numReduceTasks " + str(reduce_tasks)
mr_str += " --reducer " + reducer
mr_str += " --output " + outputdir
mr_str += " --mapper " + mapper
pyutil.printInfo("Running MR on: " + input_files)
if (pyutil.runCommand(mr_str) != 0):
pyutil.printError(33, "Error running MR" + mr_str)
"--streamingloc does not specify a valid jar files for the " +
"streaming interface (checked: " + streamingloc)
if (not os.path.isdir(options.refrbin)
or not os.path.exists(options.refrbin + "/run-model")):
optParse.error("--refrbin directory must be the Reranker Framework bin " +
"direcotry. Checked: " + options.refrbin)
## Collect input filenames.
filenames = []
for inputstring in options.inputlist:
for tmpfile in inputstring.split():
filenames += glob.glob(tmpfile)
for input in filenames:
pyutil.printInfo("Input file: " + input)
if (not os.path.exists(input)):
pyutil.printError(130, "Input file not found: " + input)
if (options.develdata and not os.path.exists(options.develdata)):
pyutil.printError(
131, "Specified devel data file not found: " + options.develdata)
## Create output directory if it does not exist.
if (not os.path.isdir(options.outputdir)):
os.makedirs(options.outputdir)
## @var hdproc
# HadoopInterface object used to process all Hadoop MR utils.
hdproc = hadooputil.HadoopInterface(hadooproot, streamingloc,
options.minsplitsize, options.tasktimeout,
"streaming interface (checked: " + streamingloc)
if (not os.path.isdir(options.refrbin) or
not os.path.exists(options.refrbin + "/run-model")):
optParse.error("--refrbin directory must be the Reranker Framework bin " +
"direcotry. Checked: " + options.refrbin)
## Collect input filenames.
filenames = []
for inputstring in options.inputlist:
for tmpfile in inputstring.split():
filenames += glob.glob(tmpfile)
for input in filenames:
pyutil.printInfo("Input file: " + input)
if (not os.path.exists(input)):
pyutil.printError(130, "Input file not found: " + input)
if (options.develdata and not os.path.exists(options.develdata)):
pyutil.printError(131, "Specified devel data file not found: " + options.develdata)
## Create output directory if it does not exist.
if (not os.path.isdir(options.outputdir)):
os.makedirs(options.outputdir)
## @var hdproc
# HadoopInterface object used to process all Hadoop MR utils.
hdproc = hadooputil.HadoopInterface(hadooproot,
streamingloc,
options.minsplitsize,