def _getClassesSqlite(self, blockName, fn):
""" Read the classes from Xmipp metadata and write as sqlite file. """
fnSqlite = fn + '.sqlite'
if not os.path.exists(fnSqlite):
classesSet = SetOfClasses2D(filename=fnSqlite)
classesSet.setImages(self._getInputParticles())
readSetOfClasses(classesSet, fn, blockName)
classesSet.write()
return fnSqlite
def _getClassesSqlite(self, blockName, fn):
""" Read the classes from Xmipp metadata and write as sqlite file. """
fnSqlite = fn + "_" + blockName + ".sqlite"
# Generate the sqlite file from classes xmd if either
# 1) Sqlite files has not been generated or
# 2) Xmd file is newer than sqlite (using modification time)
if os.path.exists(fnSqlite):
if os.path.getmtime(fn) > os.path.getmtime(fnSqlite) - 10:
pwutils.cleanPath(fnSqlite) # Clean to load from scratch
if not os.path.exists(fnSqlite):
classesSet = SetOfClasses2D(filename=fnSqlite)
classesSet.setImages(self._getInputParticles())
readSetOfClasses(classesSet, fn, blockName, preprocessClass=self._setClassOrder)
classesSet.write()
return fnSqlite
def _getClassesSqlite(self, blockName, fn):
""" Read the classes from Xmipp metadata and write as sqlite file. """
fnSqlite = fn + '_'+blockName+'.sqlite'
# Generate the sqlite file from classes xmd if either
# 1) Sqlite files has not been generated or
# 2) Xmd file is newer than sqlite (using modification time)
if os.path.exists(fnSqlite):
if os.path.getmtime(fn) > os.path.getmtime(fnSqlite)-10:
pwutils.cleanPath(fnSqlite) # Clean to load from scratch
if not os.path.exists(fnSqlite):
classesSet = SetOfClasses2D(filename=fnSqlite)
classesSet.setImages(self._getInputParticles())
readSetOfClasses(classesSet, fn, blockName,
preprocessClass=self._setClassOrder)
classesSet.write()
return fnSqlite