def main():
buzzer = RNNBuzzer()
# setup questions
questions = list(QuestionDatabase().all_questions().values())
dev_questions = [x for x in questions if x.fold == 'dev']
# setup machine agent
gspec = AbstractGuesser.list_enabled_guessers()[0]
guesser_dir = AbstractGuesser.output_path(gspec.guesser_module,
gspec.guesser_class, '')
guesser = ElasticSearchWikidataGuesser.load(guesser_dir)
guesser = ESGuesserWrapper(guesser)
machine_agent = GuesserBuzzerAgent(guesser, buzzer)
# setup human agent
human_agent = HumanAgent()
# setup hook
hooks = []
hooks.append(hook.NotifyBuzzingHook)
hooks.append(hook.GameInterfaceHook)
hooks.append(hook.VisualizeGuesserBuzzerHook(machine_agent))
hooks.append(hook.HighlightHook)
# setup game
game = Game(dev_questions, [human_agent, machine_agent], hooks)
game.run(10)
def output(self):
targets = []
for g_spec in AbstractGuesser.list_enabled_guessers():
guesser = f"{g_spec.guesser_module}.{g_spec.guesser_class}"
targets.append(
LocalTarget(f"output/guesser/best/{guesser}/best.touch"))
return targets
def merge_dfs():
GUESSERS = ["{0}.{1}".format(
x.guesser_module, x.guesser_class) \
for x in AbstractGuesser.list_enabled_guessers()]
log.info("Merging guesser DataFrames.")
merged_dir = os.path.join(c.GUESSER_TARGET_PREFIX, 'merged')
if not os.path.exists(merged_dir):
os.makedirs(merged_dir)
for fold in c.BUZZER_INPUT_FOLDS:
if os.path.exists(AbstractGuesser.guess_path(merged_dir, fold)):
log.info("Merged {0} exists, skipping.".format(fold))
continue
new_guesses = pd.DataFrame(columns=[
'fold', 'guess', 'guesser', 'qnum', 'score', 'sentence', 'token'
],
dtype='object')
for guesser in GUESSERS:
guesser_dir = os.path.join(c.GUESSER_TARGET_PREFIX, guesser)
guesses = AbstractGuesser.load_guesses(guesser_dir, folds=[fold])
new_guesses = new_guesses.append(guesses)
for col in ['qnum', 'sentence', 'token', 'score']:
new_guesses[col] = pd.to_numeric(new_guesses[col],
downcast='integer')
AbstractGuesser.save_guesses(new_guesses, merged_dir, folds=[fold])
log.info("Merging: {0} finished.".format(fold))
def test():
gspec = AbstractGuesser.list_enabled_guessers()[0]
guesser_dir = AbstractGuesser.output_path(gspec.guesser_module,
gspec.guesser_class, '')
guesser = ElasticSearchWikidataGuesser.load(guesser_dir)
torch.cuda.set_device(0)
predictor = Predictor()
predictor.cuda()
dataset = BonusPairsDataset()
examples = [x for x in dataset.examples if x['start'] != -1]
guesses = []
for example in tqdm(examples):
document = example['content']
question = example['query']
answer = example['answer']
predictions = predictor.predict(document, question, top_n=1)
prediction = predictions[0][0]
gs = guesser.guess_single(example['query'])
gs = sorted(gs.items(), key=lambda x: x[1])[::-1]
guess = gs[0][0].replace('_', ' ')
guesses.append((prediction, guess, example['answer']))
with open('results.pkl', 'wb') as f:
pickle.dump(guesses, f)
def requires(self):
for g_spec in AbstractGuesser.list_enabled_guessers():
yield TrainGuesser(
guesser_module=g_spec.guesser_module,
guesser_class=g_spec.guesser_class,
dependency_module=g_spec.dependency_module,
dependency_class=g_spec.dependency_class,
)
def requires(self):
yield AllSingleGuesserReports()
for g_spec in AbstractGuesser.list_enabled_guessers():
yield GenerateGuesses(guesser_module=g_spec.guesser_module,
guesser_class=g_spec.guesser_class,
dependency_module=g_spec.dependency_module,
dependency_class=g_spec.dependency_class,
fold='expo')
def requires(self):
for g_spec in AbstractGuesser.list_enabled_guessers():
for fold in c.GUESSER_GENERATION_FOLDS:
yield GenerateGuesses(
guesser_module=g_spec.guesser_module,
guesser_class=g_spec.guesser_class,
dependency_module=g_spec.dependency_module,
dependency_class=g_spec.dependency_class,
fold=fold)
def requires(self):
for g_spec in AbstractGuesser.list_enabled_guessers():
yield GuesserPerformance(
guesser_module=g_spec.guesser_module,
guesser_class=g_spec.guesser_class,
dependency_module=g_spec.dependency_module,
dependency_class=g_spec.dependency_class,
config_num=g_spec.config_num,
)
def run(self):
guesser_types = set()
for g_spec in AbstractGuesser.list_enabled_guessers():
guesser_types.add(
f"{g_spec.guesser_module}.{g_spec.guesser_class}")
_, _, all_dfs, _ = merge_reports(guesser_types)
best_guessers = find_best_guessers(all_dfs)
for g, config_num in best_guessers.items():
inp = f"output/guesser/{g}/{config_num}"
out = f"output/guesser/best/{g}/"
shell(f"touch {inp}/best.touch")
shell(f"mkdir -p {out}")
shell(f"cp -r {inp}/* {out}")
def __init__(self, buzzer_model_dir='data/neo_0.npz'):
gspec = AbstractGuesser.list_enabled_guessers()[0]
guesser_dir = 'data/guesser'
self.guesser = ElasticSearchWikidataGuesser.load(guesser_dir)
if chainer.cuda.available:
self.buzzer = RNNBuzzer(model_dir=buzzer_model_dir,
word_skip=conf['buzzer_word_skip'])
else:
self.buzzer = StupidBuzzer()
self.ok_to_buzz = True
self.answer = ''
self.guesses = []
self.evidence = dict()
def requires(self):
for g_spec in AbstractGuesser.list_enabled_guessers():
for fold in [c.GUESSER_DEV_FOLD, c.GUESSER_TEST_FOLD]:
yield GuesserReport(guesser_module=g_spec.guesser_module,
guesser_class=g_spec.guesser_class,
dependency_module=g_spec.dependency_module,
dependency_class=g_spec.dependency_class,
config_num=g_spec.config_num,
fold=fold)
if os.path.exists(c.QANTA_EXPO_DATASET_PATH):
yield GuesserReport(guesser_module=g_spec.guesser_module,
guesser_class=g_spec.guesser_class,
dependency_module=g_spec.dependency_module,
dependency_class=g_spec.dependency_class,
config_num=g_spec.config_num,
fold=c.EXPO_FOLD)
def test_buzzer():
questions = QuestionDatabase().all_questions()
buzzer = RNNBuzzer(word_skip=conf['buzzer_word_skip'])
# setup machine agent
gspec = AbstractGuesser.list_enabled_guessers()[0]
guesser_dir = AbstractGuesser.output_path(gspec.guesser_module,
gspec.guesser_class, '')
guesser = ElasticSearchWikidataGuesser.load(guesser_dir)
guesser = ESGuesserWrapper(guesser)
key = list(questions.keys())[4]
question = questions[key].flatten_text().split()
for i, word in enumerate(question):
clue = ' '.join(question[:i])
guesses = guesser.guess(clue)
buzz = buzzer.buzz(guesses)
print(buzz)
def generate_guesser_slurm(slurm_config_file, task, output_dir):
with open(slurm_config_file) as f:
slurm_config = yaml.load(f)
default_slurm_config = slurm_config['default']
env = Environment(loader=PackageLoader('qanta', 'slurm/templates'))
template = env.get_template('guesser-luigi-template.sh')
enabled_guessers = list(AbstractGuesser.list_enabled_guessers())
for i, gs in enumerate(enabled_guessers):
if gs.guesser_class == 'ElasticSearchGuesser':
raise ValueError(
'ElasticSearchGuesser is not compatible with slurm')
elif gs.guesser_class in slurm_config:
guesser_slurm_config = slurm_config[gs.guesser_class]
else:
guesser_slurm_config = None
partition = get_slurm_config_value('partition', default_slurm_config,
guesser_slurm_config)
qos = get_slurm_config_value('qos', default_slurm_config,
guesser_slurm_config)
mem_per_cpu = get_slurm_config_value('mem_per_cpu',
default_slurm_config,
guesser_slurm_config)
gres = get_slurm_config_value('gres', default_slurm_config,
guesser_slurm_config)
max_time = get_slurm_config_value('max_time', default_slurm_config,
guesser_slurm_config)
cpus_per_task = get_slurm_config_value('cpus_per_task',
default_slurm_config,
guesser_slurm_config)
account = get_slurm_config_value('account', default_slurm_config,
guesser_slurm_config)
if task == 'GuesserReport':
folds = GUESSER_GENERATION_FOLDS
else:
folds = []
script = template.render({
'task': task,
'guesser_module': gs.guesser_module,
'guesser_class': gs.guesser_class,
'dependency_module': gs.dependency_module,
'dependency_class': gs.dependency_class,
'config_num': gs.config_num,
'partition': partition,
'qos': qos,
'mem_per_cpu': mem_per_cpu,
'max_time': max_time,
'gres': gres,
'cpus_per_task': cpus_per_task,
'account': account,
'folds': folds
})
slurm_file = path.join(output_dir, f'slurm-{i}.sh')
with safe_open(slurm_file, 'w') as f:
f.write(script)
singleton_path = 'qanta/slurm/templates/guesser-singleton.sh'
singleton_output = path.join(output_dir, 'guesser-singleton.sh')
shell(f'cp {singleton_path} {singleton_output}')
master_template = env.get_template('guesser-master-template.sh')
master_script = master_template.render({
'script_list': [
path.join(output_dir, f'slurm-{i}.sh')
for i in range(len(enabled_guessers))
] + [singleton_output],
'gres':
gres,
'partition':
partition,
'qos':
qos,
'mem_per_cpu':
mem_per_cpu,
'max_time':
max_time,
'gres':
gres,
'cpus_per_task':
cpus_per_task,
'account':
account
})
with safe_open(path.join(output_dir, 'slurm-master.sh'), 'w') as f:
f.write(master_script)
def generate_guesser_slurm(slurm_config_file, task, output_dir):
with open(slurm_config_file) as f:
slurm_config = yaml.load(f)
default_slurm_config = slurm_config['default']
env = Environment(loader=PackageLoader('qanta', 'slurm/templates'))
template = env.get_template('guesser-luigi-template.sh')
enabled_guessers = list(AbstractGuesser.list_enabled_guessers())
for i, gs in enumerate(enabled_guessers):
if gs.guesser_class == 'ElasticSearchGuesser':
raise ValueError('ElasticSearchGuesser is not compatible with slurm')
elif gs.guesser_class in slurm_config:
guesser_slurm_config = slurm_config[gs.guesser_class]
else:
guesser_slurm_config = None
partition = get_slurm_config_value('partition', default_slurm_config, guesser_slurm_config)
qos = get_slurm_config_value('qos', default_slurm_config, guesser_slurm_config)
mem_per_cpu = get_slurm_config_value('mem_per_cpu', default_slurm_config, guesser_slurm_config)
gres = get_slurm_config_value('gres', default_slurm_config, guesser_slurm_config)
max_time = get_slurm_config_value('max_time', default_slurm_config, guesser_slurm_config)
cpus_per_task = get_slurm_config_value('cpus_per_task', default_slurm_config, guesser_slurm_config)
account = get_slurm_config_value('account', default_slurm_config, guesser_slurm_config)
if task == 'GuesserReport':
folds = GUESSER_GENERATION_FOLDS
else:
folds = []
script = template.render({
'task': task,
'guesser_module': gs.guesser_module,
'guesser_class': gs.guesser_class,
'dependency_module': gs.dependency_module,
'dependency_class': gs.dependency_class,
'config_num': gs.config_num,
'partition': partition,
'qos': qos,
'mem_per_cpu': mem_per_cpu,
'max_time': max_time,
'gres': gres,
'cpus_per_task': cpus_per_task,
'account': account,
'folds': folds
})
slurm_file = path.join(output_dir, f'slurm-{i}.sh')
with safe_open(slurm_file, 'w') as f:
f.write(script)
singleton_path = 'qanta/slurm/templates/guesser-singleton.sh'
singleton_output = path.join(output_dir, 'guesser-singleton.sh')
shell(f'cp {singleton_path} {singleton_output}')
master_template = env.get_template('guesser-master-template.sh')
master_script = master_template.render({
'script_list': [
path.join(output_dir, f'slurm-{i}.sh') for i in range(len(enabled_guessers))
] + [singleton_output],
'gres': gres,
'partition': partition,
'qos': qos,
'mem_per_cpu': mem_per_cpu,
'max_time': max_time,
'gres': gres,
'cpus_per_task': cpus_per_task,
'account': account
})
with safe_open(path.join(output_dir, 'slurm-master.sh'), 'w') as f:
f.write(master_script)
import json
import textwrap
from collections import defaultdict, Counter, namedtuple
import argparse
import itertools
from csv import DictReader
from time import sleep
import os
from qanta.datasets.quiz_bowl import QuizBowlDataset, QuestionDatabase
from qanta.guesser.abstract import AbstractGuesser
GUESSERS = [x.guesser_class for x in AbstractGuesser.list_enabled_guessers()]
kSHOW_RIGHT = False
kPAUSE = .25
kSYSTEM = "OUSIA"
kBIGNUMBERS = {
-1:
"""
88888888
88888888
from tqdm import tqdm
from elasticsearch_dsl.connections import connections
from elasticsearch_dsl import DocType, Text, Keyword, Search, Index
from qanta.util.constants import GUESSER_DEV_FOLD
from qanta.guesser.abstract import AbstractGuesser
from qanta.datasets.quiz_bowl import QuizBowlDataset
from qanta.guesser.experimental.elasticsearch_instance_of import ElasticSearchWikidataGuesser
from qanta.guesser.experimental.elasticsearch_instance_of import ElasticSearchIndex
INDEX_NAME = 'qb_ir_instance_of'
gspec = AbstractGuesser.list_enabled_guessers()[0]
guesser_dir = AbstractGuesser.output_path(gspec.guesser_module,
gspec.guesser_class, '')
guesser = ElasticSearchWikidataGuesser.load(guesser_dir)
es_index = ElasticSearchIndex()
def recursive_guess(question, k=0):
p_class, p_prob = guesser.test_instance_of([question])[0]
first_guesses = search_not(question, p_class)
print('First round')
for x in first_guesses:
print(x)
print()
print('Second round')
new_guesses = []
for i in range(k):
guess = first_guesses[i][0]
question += ' ' + ' '.join(guess.split('_'))
guesses = es_index.search(question, p_class, p_prob, 0.6)
import random
import pickle
from qanta.config import conf
from qanta.util.io import safe_path
from qanta.util.multiprocess import _multiprocess
from qanta.guesser.abstract import AbstractGuesser
from qanta.datasets.quiz_bowl import QuizBowlDataset, Question
from qanta.guesser.experimental.elasticsearch_instance_of import ElasticSearchWikidataGuesser
'''Randomly shuffle the word order and see if it changes the guesses.
'''
gspec = AbstractGuesser.list_enabled_guessers()[0]
guesser_dir = AbstractGuesser.output_path(gspec.guesser_module,
gspec.guesser_class, '')
guesser = ElasticSearchWikidataGuesser.load(guesser_dir)
def main():
fold = 'guessdev'
db = QuizBowlDataset(1, guesser_train=True, buzzer_train=True)
questions = db.questions_in_folds([fold])
first_n = lambda x: len(x)
print(guesser.guess_single(' '.join(questions[0].text.values())))
'''
s = [0, 0, 0, 0, 0]
for q in questions:
sents = list(q.text.values())
text_before = ' '.join(sents[:first_n(sents)])
words = text.split()
def generate_guesser_slurm(slurm_config_file, task, output_dir):
with open(slurm_config_file) as f:
slurm_config = yaml.load(f)
default_slurm_config = slurm_config["default"]
env = Environment(loader=PackageLoader("qanta", "slurm/templates"))
template = env.get_template("guesser-luigi-template.sh")
enabled_guessers = list(AbstractGuesser.list_enabled_guessers())
for i, gs in enumerate(enabled_guessers):
if gs.guesser_class == "ElasticSearchGuesser":
raise ValueError(
"ElasticSearchGuesser is not compatible with slurm")
elif gs.guesser_class in slurm_config:
guesser_slurm_config = slurm_config[gs.guesser_class]
else:
guesser_slurm_config = None
partition = get_slurm_config_value("partition", default_slurm_config,
guesser_slurm_config)
qos = get_slurm_config_value("qos", default_slurm_config,
guesser_slurm_config)
mem_per_cpu = get_slurm_config_value("mem_per_cpu",
default_slurm_config,
guesser_slurm_config)
gres = get_slurm_config_value("gres", default_slurm_config,
guesser_slurm_config)
max_time = get_slurm_config_value("max_time", default_slurm_config,
guesser_slurm_config)
cpus_per_task = get_slurm_config_value("cpus_per_task",
default_slurm_config,
guesser_slurm_config)
account = get_slurm_config_value("account", default_slurm_config,
guesser_slurm_config)
if task == "GuesserReport":
folds = GUESSER_GENERATION_FOLDS
else:
folds = []
script = template.render({
"task": task,
"guesser_module": gs.guesser_module,
"guesser_class": gs.guesser_class,
"dependency_module": gs.dependency_module,
"dependency_class": gs.dependency_class,
"config_num": gs.config_num,
"partition": partition,
"qos": qos,
"mem_per_cpu": mem_per_cpu,
"max_time": max_time,
"gres": gres,
"cpus_per_task": cpus_per_task,
"account": account,
"folds": folds,
})
slurm_file = path.join(output_dir, f"slurm-{i}.sh")
with safe_open(slurm_file, "w") as f:
f.write(script)
singleton_path = "qanta/slurm/templates/guesser-singleton.sh"
singleton_output = path.join(output_dir, "guesser-singleton.sh")
shell(f"cp {singleton_path} {singleton_output}")
master_template = env.get_template("guesser-master-template.sh")
master_script = master_template.render({
"script_list": [
path.join(output_dir, f"slurm-{i}.sh")
for i in range(len(enabled_guessers))
] + [singleton_output],
"gres":
gres,
"partition":
partition,
"qos":
qos,
"mem_per_cpu":
mem_per_cpu,
"max_time":
max_time,
"gres":
gres,
"cpus_per_task":
cpus_per_task,
"account":
account,
})
with safe_open(path.join(output_dir, "slurm-master.sh"), "w") as f:
f.write(master_script)
