def test_make_plots(self):
"""make_plots: tests whether the average plots are generated and if
dictionary for the html generation is properly formatted"""
filename1='/tmp/test/testSampleIDSample1_ave.png'
filename2='/tmp/test/testSampleIDSample1_raw.png'
folder1='/tmp/test/'
self._paths_to_clean_up = [filename1,filename2]
self._folders_to_cleanup=[folder1]
exp1={'SampleID': {'Sample1': {'test': {'ave': [' 7.000', ' 2.052'], 'err': [' nan', ' 0.000']}}}}
exp2={'test': {'groups': {'SampleID': {'Sample1': {'groupcolor': '#0000ff', 'raw_link': 'html_plots/testSampleIDSample1_raw.png', 'groupsamples': ['Sample1'], 'ave_link': 'html_plots/testSampleIDSample1_ave.png'}}}, 'samples': {'Sample1': {'color': '#0000ff', 'link': 'html_plots/testSample1.png'}}}}
create_dir('/tmp/test/',False)
obs1,obs2 = make_plots(self.background_color,self.label_color, \
self.rare_data,self.ymax, self.xmax,'/tmp/test/', \
self.resolution, self.imagetype,self.groups,\
self.colors,self.data_colors,self.metric_name,\
self.labelname,self.rarefaction_data_mat, \
self.rarefaction_legend_mat,self.sample_dict, \
self.data_colors,self.colors2)
self.assertEqual(obs1,exp1)
self.assertEqual(obs2,exp2)
self.assertTrue(exists(filename1))
self.assertTrue(exists(filename2))
self.assertTrue(exists(folder1))
def test_make_plots(self):
"""make_plots: tests whether the average plots are generated and if
dictionary for the html generation is properly formatted"""
filename1='/tmp/test/testcol_0_row_0_ave.png'
filename2='/tmp/test/testcol_0_row_0_raw.png'
folder1='/tmp/test/'
self._paths_to_clean_up = [filename1,filename2]
self._folders_to_cleanup=[folder1]
exp1={'SampleID': {'Sample1': {'test': {'ave': [' 7.000', ' 2.052'], 'err': [' nan', ' 0.000']}}}}
exp2={'test': {'groups': {'SampleID': {'Sample1': {'groupcolor': '#ff0000', 'raw_link': 'html_plots/testcol_0_row_0_raw.png', 'groupsamples': ['Sample1'], 'ave_link': 'html_plots/testcol_0_row_0_ave.png'}}}, 'samples': {'Sample1': {'color': '#ff0000', 'link': 'html_plots/testcol_0_row_0.png'}}}}
create_dir('/tmp/test/',False)
obs1,obs2 = make_plots(self.background_color,self.label_color, \
self.rare_data,self.ymax, self.xmax,'/tmp/test/', \
self.resolution, self.imagetype,self.groups,\
self.colors,self.data_colors,self.metric_name,\
self.labelname,self.rarefaction_data_mat, \
self.rarefaction_legend_mat,self.sample_dict, \
self.data_colors,self.colors2,self.mapping_lookup)
self.assertEqual(obs1,exp1)
self.assertEqual(obs2,exp2)
self.assertTrue(exists(filename1))
self.assertTrue(exists(filename2))
self.assertTrue(exists(folder1))
def test_make_plots(self):
"""make_plots: tests whether the average plots are generated and if
dictionary for the html generation is properly formatted"""
filename1 = "/tmp/test/testcol_0_row_0_ave.png"
filename2 = "/tmp/test/testcol_0_row_0_raw.png"
folder1 = "/tmp/test/"
self._paths_to_clean_up = [filename1, filename2]
self._folders_to_cleanup = [folder1]
exp1 = {
"SampleID": {
"Sample1": {"test": {"ave": [" 7.000", " 2.052"], "err": [" nan", " 0.000"]}}
}
}
exp2 = {
"test": {
"groups": {
"SampleID": {
"Sample1": {
"groupcolor": "#ff0000",
"raw_link": "html_plots/testcol_0_row_0_raw.png",
"groupsamples": ["Sample1"],
"ave_link": "html_plots/testcol_0_row_0_ave.png",
}
}
},
"samples": {"Sample1": {"color": "#ff0000", "link": "html_plots/testcol_0_row_0.png"}},
}
}
create_dir("/tmp/test/", False)
obs1, obs2 = make_plots(
self.background_color,
self.label_color,
self.rare_data,
self.ymax,
self.xmax,
"/tmp/test/",
self.resolution,
self.imagetype,
self.groups,
self.colors,
self.data_colors,
self.metric_name,
self.labelname,
self.rarefaction_data_mat,
self.rarefaction_legend_mat,
self.sample_dict,
self.data_colors,
self.colors2,
self.mapping_lookup,
)
self.assertEqual(obs1, exp1)
self.assertEqual(obs2, exp2)
self.assertTrue(exists(filename1))
self.assertTrue(exists(filename2))
self.assertTrue(exists(folder1))