def L_left_lindblad(H, PARAMS):
I = qeye(PARAMS['N'])
d_h = tensor(PARAMS['A_L'], I)
J_leads = J_Lorentzian
Lambda_up = lambda x : Lamdba_complex_rate(x, J_leads, PARAMS['mu_L'], PARAMS['T_L'], PARAMS['Gamma_L'],
PARAMS['delta_L'], PARAMS['Omega_L'], type='p', real_only=True)
Lambda_down = lambda x : Lamdba_complex_rate(x, J_leads, PARAMS['mu_L'], PARAMS['T_L'], PARAMS['Gamma_L'],
PARAMS['delta_L'], PARAMS['Omega_L'], type='m', real_only=True)
energies, states = H.eigenstates()
L=0
for i in range(len(energies)):
for j in range(len(energies)):
eta_ij = energies[i] - energies[j]
if (abs(eta_ij)>0):# take limit of rates going to zero
d_h_ij = d_h.matrix_element(states[i].dag(), states[j])
d_h_ij_sq = d_h_ij*d_h_ij.conjugate() # real by construction
if (abs(d_h_ij_sq)>0): # No need to do anything if the matrix element is zero
IJ = states[i]*states[j].dag()
JI = states[j]*states[i].dag()
JJ = states[j]*states[j].dag()
II = states[i]*states[i].dag()
rate_up = Lambda_up(-eta_ij) # evaluated at positive freq diffs
rate_down = Lambda_down(-eta_ij)
print(rate_down)
T1 = rate_up*spre(II)+rate_down*spre(JJ)
T2 = rate_up.conjugate()*spost(II)+rate_down.conjugate()*spost(JJ)
T3 = (rate_up*sprepost(JI, IJ)+rate_down*sprepost(IJ,JI))
L += d_h_ij_sq*(0.5*(T1 + T2) - T3)
return -L
def L_nonsecular_old(H_vib, A, eps, Gamma, T, J, time_units='cm', silent=False):
#Construct non-secular liouvillian
ti = time.time()
d = H_vib.shape[0]
evals, evecs = H_vib.eigenstates()
X1, X2, X3, X4 = 0, 0, 0, 0
for i in range(int(d)):
for j in range(int(d)):
eps_ij = abs(evals[i]-evals[j])
A_ij = A.matrix_element(evecs[i].dag(), evecs[j])
A_ji = (A.dag()).matrix_element(evecs[j].dag(), evecs[i])
Occ = Occupation(eps_ij, T, time_units)
IJ = evecs[i]*evecs[j].dag()
JI = evecs[j]*evecs[i].dag()
# 0.5*np.pi*alpha*(N+1)
if abs(A_ij)>0 or abs(A_ji)>0:
r_up = 2*np.pi*J(eps_ij, Gamma, eps)*Occ
r_down = 2*np.pi*J(eps_ij, Gamma, eps)*(Occ+1)
X3+= r_down*A_ij*IJ
X4+= r_up*A_ij*IJ
X1+= r_up*A_ji*JI
X2+= r_down*A_ji*JI
L = spre(A*X1) -sprepost(X1,A)+spost(X2*A)-sprepost(A,X2)
L+= spre(A.dag()*X3)-sprepost(X3, A.dag())+spost(X4*A.dag())-sprepost(A.dag(), X4)
if not silent:
print(("It took ", time.time()-ti, " seconds to build the Non-secular RWA Liouvillian"))
return -0.5*L
def L_full_secular(H_vib, A, eps, Gamma, T, J, time_units='cm', silent=False):
'''
Initially assuming that the vibronic eigenstructure has no
degeneracy and the secular approximation has been made
'''
ti = time.time()
d = H_vib.shape[0]
L = 0
eVals, eVecs = H_vib.eigenstates()
A_dag = A.dag()
terms = 0
for l in range(int(d)):
for m in range(int(d)):
for p in range(int(d)):
for q in range(int(d)):
secular_freq = (eVals[l] - eVals[m]) - (eVals[p] -
eVals[q])
if abs(secular_freq) < 1E-10:
terms += 1
A_lm = A.matrix_element(eVecs[l].dag(), eVecs[m])
A_lm_star = A_dag.matrix_element(
eVecs[m].dag(), eVecs[l])
A_pq = A.matrix_element(eVecs[p].dag(), eVecs[q])
A_pq_star = A_dag.matrix_element(
eVecs[q].dag(), eVecs[p])
coeff_1 = A_lm * A_pq_star
coeff_2 = A_lm_star * A_pq
eps_pq = abs(eVals[p] - eVals[q])
Occ = Occupation(eps_pq, T, time_units)
r_up = np.pi * J(eps_pq, Gamma, eps) * Occ
r_down = np.pi * J(eps_pq, Gamma, eps) * (Occ + 1)
LM = eVecs[l] * eVecs[m].dag()
ML = LM.dag()
PQ = eVecs[p] * eVecs[q].dag()
QP = PQ.dag()
"""
if abs(secular_freq) !=0:
print (abs(secular_freq), r_up, A_lm, A_lm_star,
A_pq, A_pq_star, r_down, l,m,p,q, m==q, l==p)
"""
if abs(r_up * coeff_1) > 0:
L += r_up * coeff_1 * (spre(LM * QP) -
sprepost(QP, LM))
if abs(r_up * coeff_2) > 0:
L += r_up * coeff_2 * (spost(PQ * ML) -
sprepost(ML, PQ))
if abs(r_down * coeff_1) > 0:
L += r_down * coeff_1 * (spre(ML * PQ) -
sprepost(PQ, ML))
if abs(r_down * coeff_2) > 0:
L += r_down * coeff_2 * (spost(QP * LM) -
sprepost(LM, QP))
if not silent:
print(("It took ", time.time() - ti,
" seconds to build the secular Liouvillian"))
print((
"Secular approximation kept {:0.2f}% of total ME terms. \n".format(
100 * float(terms) / (d * d * d * d))))
return -L
def test_general_stochastic():
"Stochastic: general_stochastic"
"Reproduce smesolve homodyne"
tol = 0.025
N = 4
gamma = 0.25
ntraj = 20
nsubsteps = 50
a = destroy(N)
H = [[a.dag() * a, f]]
psi0 = coherent(N, 0.5)
sc_ops = [np.sqrt(gamma) * a, np.sqrt(gamma) * a * 0.5]
e_ops = [a.dag() * a, a + a.dag(), (-1j) * (a - a.dag())]
L = liouvillian(QobjEvo([[a.dag() * a, f]], args={"a": 2}), c_ops=sc_ops)
L.compile()
sc_opsM = [QobjEvo(spre(op) + spost(op.dag())) for op in sc_ops]
[op.compile() for op in sc_opsM]
e_opsM = [spre(op) for op in e_ops]
def d1(t, vec):
return L.mul_vec(t, vec)
def d2(t, vec):
out = []
for op in sc_opsM:
out.append(op.mul_vec(t, vec) - op.expect(t, vec) * vec)
return np.stack(out)
times = np.linspace(0, 0.5, 13)
res_ref = mesolve(H, psi0, times, sc_ops, e_ops, args={"a": 2})
list_methods_tol = ['euler-maruyama', 'platen', 'explicit15']
for solver in list_methods_tol:
res = general_stochastic(ket2dm(psi0),
times,
d1,
d2,
len_d2=2,
e_ops=e_opsM,
normalize=False,
ntraj=ntraj,
nsubsteps=nsubsteps,
solver=solver)
assert_(
all([
np.mean(abs(res.expect[idx] - res_ref.expect[idx])) < tol
for idx in range(len(e_ops))
]))
assert_(len(res.measurement) == ntraj)
def liouvillian_build(H_0, A, gamma, wRC, T_C):
# Now this function has to construct the liouvillian so that it can be passed to mesolve
H_0, A, Chi, Xi = RCME_operators(H_0, A, gamma, beta_f(T_C))
L = 0
L -= spre(A * Chi)
L += sprepost(A, Chi)
L += sprepost(Chi, A)
L -= spost(Chi * A)
L += spre(A * Xi)
L += sprepost(A, Xi)
L -= sprepost(Xi, A)
L -= spost(Xi * A)
return L, Chi + Xi
def _convert_superoperator_to_qutip(expr, full_space, mapping):
if full_space != expr.space:
all_spaces = full_space.local_factors
own_space_index = all_spaces.index(expr.space)
return qutip.tensor(
*([qutip.qeye(s.dimension) for s in all_spaces[:own_space_index]] +
convert_to_qutip(expr, expr.space, mapping=mapping) + [
qutip.qeye(s.dimension)
for s in all_spaces[own_space_index + 1:]
]))
if isinstance(expr, IdentitySuperOperator):
return qutip.spre(
qutip.tensor(
*[qutip.qeye(s.dimension) for s in full_space.local_factors]))
elif isinstance(expr, SuperOperatorPlus):
return sum(
(convert_to_qutip(op, full_space, mapping=mapping)
for op in expr.operands),
0,
)
elif isinstance(expr, SuperOperatorTimes):
ops_qutip = [
convert_to_qutip(o, full_space, mapping=mapping)
for o in expr.operands
]
return reduce(lambda a, b: a * b, ops_qutip, 1)
elif isinstance(expr, ScalarTimesSuperOperator):
return complex(expr.coeff) * convert_to_qutip(
expr.term, full_space, mapping=mapping)
elif isinstance(expr, SPre):
return qutip.spre(
convert_to_qutip(expr.operands[0], full_space, mapping))
elif isinstance(expr, SPost):
return qutip.spost(
convert_to_qutip(expr.operands[0], full_space, mapping))
elif isinstance(expr, SuperOperatorTimesOperator):
sop, op = expr.operands
return convert_to_qutip(sop, full_space,
mapping=mapping) * convert_to_qutip(
op, full_space, mapping=mapping)
elif isinstance(expr, ZeroSuperOperator):
return qutip.spre(
convert_to_qutip(ZeroOperator, full_space, mapping=mapping))
else:
raise ValueError("Cannot convert '%s' of type %s" %
(str(expr), type(expr)))
def test_terminator(self, combine):
Q = sigmaz()
op = -2 * spre(Q) * spost(Q.dag()) + spre(Q.dag() * Q) + spost(
Q.dag() * Q)
bath = DrudeLorentzPadeBath(
Q=Q,
lam=0.025,
T=1 / 0.95,
Nk=1,
gamma=0.05,
combine=combine,
)
delta, terminator = bath.terminator()
assert np.abs(delta - (0.0 / 4.0)) < 1e-8
assert isequal(terminator, -(0.0 / 4.0) * op, tol=1e-8)
def test_sprepost(self):
U1 = rand_unitary(3)
U2 = rand_unitary(3)
S1 = spre(U1) * spost(U2)
S2 = sprepost(U1, U2)
assert_(S1 == S2)
def test_sprepost(self):
U1 = rand_unitary(3)
U2 = rand_unitary(3)
S1 = spre(U1) * spost(U2)
S2 = sprepost(U1, U2)
assert_(S1 == S2)
def L_vib_lindblad(H_vib, A, eps, Gamma, T, J, time_units='cm', silent=False):
'''
Initially assuming that the vibronic eigenstructure has no
degeneracy and the secular approximation has been made
'''
ti = time.time()
d = H_vib.shape[0]
ti = time.time()
L = 0
eig = H_vib.eigenstates()
eVals = eig[0]
eVecs = eig[1] # come out like kets
l = 0
occs = []
for i in range(int(d)):
l = 0
for j in range(int(d)):
t_0 = time.time(
) # initial time reference for tracking slow calculations
lam_ij = A.matrix_element(eVecs[i].dag(), eVecs[j])
#lam_mn = (A.dag()).matrix_element(eVecs[n].dag(), eVecs[m])
lam_ij_sq = lam_ij * lam_ij.conjugate() # real by construction
eps_ij = abs(eVals[i] - eVals[j])
if abs(lam_ij_sq) > 0:
IJ = eVecs[i] * eVecs[j].dag()
JI = eVecs[j] * eVecs[i].dag()
JJ = eVecs[j] * eVecs[j].dag()
II = eVecs[i] * eVecs[i].dag()
Occ = Occupation(eps_ij, T, time_units)
r_up = 2 * np.pi * J(eps_ij, Gamma, eps) * Occ
r_down = 2 * np.pi * J(eps_ij, Gamma, eps) * (Occ + 1)
T1 = r_up * spre(II) + r_down * spre(JJ)
T2 = r_up.conjugate() * spost(II) + r_down.conjugate() * spost(
JJ)
T3 = (r_up * sprepost(JI, IJ) + r_down * sprepost(IJ, JI))
L += lam_ij_sq * (0.5 * (T1 + T2) - T3)
l += 1
if not silent:
print(("It took ", time.time() - ti,
" seconds to build the vibronic Lindblad Liouvillian"))
return -L
def test_general_stochastic():
"Stochastic: general_stochastic"
"Reproduce smesolve homodyne"
tol = 0.025
N = 4
gamma = 0.25
ntraj = 20
nsubsteps = 50
a = destroy(N)
H = [[a.dag() * a,f]]
psi0 = coherent(N, 0.5)
sc_ops = [np.sqrt(gamma) * a, np.sqrt(gamma) * a * 0.5]
e_ops = [a.dag() * a, a + a.dag(), (-1j)*(a - a.dag())]
L = liouvillian(QobjEvo([[a.dag() * a,f]], args={"a":2}), c_ops = sc_ops)
L.compile()
sc_opsM = [QobjEvo(spre(op) + spost(op.dag())) for op in sc_ops]
[op.compile() for op in sc_opsM]
e_opsM = [spre(op) for op in e_ops]
def d1(t, vec):
return L.mul_vec(t,vec)
def d2(t, vec):
out = []
for op in sc_opsM:
out.append(op.mul_vec(t,vec)-op.expect(t,vec)*vec)
return np.stack(out)
times = np.linspace(0, 0.5, 13)
res_ref = mesolve(H, psi0, times, sc_ops, e_ops, args={"a":2})
list_methods_tol = ['euler-maruyama',
'platen',
'explicit15']
for solver in list_methods_tol:
res = general_stochastic(ket2dm(psi0),times,d1,d2,len_d2=2, e_ops=e_opsM,
normalize=False, ntraj=ntraj, nsubsteps=nsubsteps,
solver=solver)
assert_(all([np.mean(abs(res.expect[idx] - res_ref.expect[idx])) < tol
for idx in range(len(e_ops))]))
assert_(len(res.measurement) == ntraj)
def L_EM_lindblad(splitting,
col_em,
Gamma,
T,
J,
time_units='cm',
silent=False):
# col_em is collapse operator
ti = time.time()
L = 0
EMnb = Occupation(splitting, T, time_units)
L += 2 * np.pi * J(splitting, Gamma, splitting) * (EMnb + 1) * (
sprepost(col_em, col_em.dag()) - 0.5 *
(spre(col_em.dag() * col_em) + spost(col_em.dag() * col_em)))
L += 2 * np.pi * J(splitting, Gamma, splitting) * EMnb * (
sprepost(col_em.dag(), col_em) - 0.5 *
(spre(col_em * col_em.dag()) + spost(col_em * col_em.dag())))
if not silent:
print(("It took ", time.time() - ti,
" seconds to build the electronic-Lindblad Liouvillian"))
return L
def testOperatorUnitaryTransform(self):
"""
Superoperator: Unitary transformation with operators and superoperators
"""
N = 3
rho = rand_dm(N)
U = rand_unitary(N)
rho1 = U * rho * U.dag()
rho2_vec = spre(U) * spost(U.dag()) * operator_to_vector(rho)
rho2 = vector_to_operator(rho2_vec)
assert_((rho1 - rho2).norm() < 1e-8)
def testOperatorSpreAppl(self):
"""
Superoperator: apply operator and superoperator from left (spre)
"""
N = 3
rho = rand_dm(N)
U = rand_unitary(N)
rho1 = U * rho
rho2_vec = spre(U) * operator_to_vector(rho)
rho2 = vector_to_operator(rho2_vec)
assert_((rho1 - rho2).norm() < 1e-8)
def _spectrum_pi(H, wlist, c_ops, a_op, b_op, use_pinv=False):
"""
Internal function for calculating the spectrum of the correlation function
:math:`\left<A(\\tau)B(0)\\right>`.
"""
#print issuper(H)
L = H if issuper(H) else liouvillian(H, c_ops)
tr_mat = tensor([qeye(n) for n in L.dims[0][0]])
N = prod(L.dims[0][0])
A = L.full()
b = spre(b_op).full()
a = spre(a_op).full()
tr_vec = transpose(mat2vec(tr_mat.full()))
rho_ss = steadystate(L)
rho = transpose(mat2vec(rho_ss.full()))
I = identity(N * N)
P = kron(transpose(rho), tr_vec)
Q = I - P
spectrum = zeros(len(wlist))
for idx, w in enumerate(wlist):
if use_pinv:
MMR = pinv(-1.0j * w * I + A)
else:
MMR = dot(Q, solve(-1.0j * w * I + A, Q))
s = dot(tr_vec,
dot(a, dot(MMR, dot(b, transpose(rho)))))
spectrum[idx] = -2 * real(s[0, 0])
return spectrum
def testOperatorSpreAppl(self):
"""
Superoperator: apply operator and superoperator from left (spre)
"""
N = 3
rho = rand_dm(N)
U = rand_unitary(N)
rho1 = U * rho
rho2_vec = spre(U) * operator_to_vector(rho)
rho2 = vector_to_operator(rho2_vec)
assert_((rho1 - rho2).norm() < 1e-8)
def testOperatorUnitaryTransform(self):
"""
Superoperator: Unitary transformation with operators and superoperators
"""
N = 3
rho = rand_dm(N)
U = rand_unitary(N)
rho1 = U * rho * U.dag()
rho2_vec = spre(U) * spost(U.dag()) * operator_to_vector(rho)
rho2 = vector_to_operator(rho2_vec)
assert_((rho1 - rho2).norm() < 1e-8)
def test_qpt_snot():
"quantum process tomography for snot gate"
U_psi = snot()
U_rho = spre(U_psi) * spost(U_psi.dag())
N = 1
op_basis = [[qeye(2), sigmax(), 1j * sigmay(), sigmaz()] for i in range(N)]
# op_label = [["i", "x", "y", "z"] for i in range(N)]
chi1 = qpt(U_rho, op_basis)
chi2 = np.zeros((2 ** (2 * N), 2 ** (2 * N)), dtype=complex)
chi2[1, 1] = chi2[1, 3] = chi2[3, 1] = chi2[3, 3] = 0.5
assert_(norm(chi2 - chi1) < 1e-8)
def test_qpt_snot():
"quantum process tomography for snot gate"
U_psi = snot()
U_rho = spre(U_psi) * spost(U_psi.dag())
N = 1
op_basis = [[qeye(2), sigmax(), 1j * sigmay(), sigmaz()] for i in range(N)]
# op_label = [["i", "x", "y", "z"] for i in range(N)]
chi1 = qpt(U_rho, op_basis)
chi2 = np.zeros((2**(2 * N), 2**(2 * N)), dtype=complex)
chi2[1, 1] = chi2[1, 3] = chi2[3, 1] = chi2[3, 3] = 0.5
assert_(norm(chi2 - chi1) < 1e-8)
def liouvillian_build_new(H_0, A, gamma, wRC, T_C):
# Now this function has to construct the liouvillian so that it can be passed to mesolve
H_0, A, Chi, Xi = RCME_operators(H_0, A, gamma, beta_f(T_C))
Z = Chi + Xi
Z_dag = Z.dag()
L = 0
#L+=spre(A*Z_dag)
#L-=sprepost(A, Z)
#L-=sprepost(Z_dag, A)
#L+=spost(Z_dag*A)
L -= spre(A * Z_dag)
L += sprepost(A, Z)
L += sprepost(Z_dag, A)
L -= spost(Z * A)
print("new L built")
return L, Z
def liouvillian(self):
"""Build the total Liouvillian using the Dicke basis.
Returns
-------
liouv: :class: qutip.Qobj
The Liouvillian matrix for the system.
"""
lindblad = self.lindbladian()
if self.hamiltonian is None:
liouv = lindblad
else:
hamiltonian = self.hamiltonian
hamiltonian_superoperator = - 1j * \
spre(hamiltonian) + 1j * spost(hamiltonian)
liouv = lindblad + hamiltonian_superoperator
return liouv
def liouvillian(self):
"""Build the total Liouvillian in the Dicke basis.
Returns
-------
liouv: :class: qutip.Qobj
The Liouvillian matrix for the system.
"""
lindblad = self.lindbladian()
if self.hamiltonian is None:
liouv = lindblad
else:
hamiltonian = self.hamiltonian
hamiltonian_superoperator = - 1j * \
spre(hamiltonian) + 1j * spost(hamiltonian)
liouv = lindblad + hamiltonian_superoperator
return liouv
def generator(k,H,L1,L2):
"""
Create the generator for the cascaded chain of k system copies
"""
# create bare operators
id = qt.qeye(H.dims[0][0])
Id = qt.spre(id)*qt.spost(id)
Hlist = []
L1list = []
L2list = []
for l in range(1,k+1):
h = H
l1 = L1
l2 = L2
for i in range(1,l):
h = qt.tensor(h,id)
l1 = qt.tensor(l1,id)
l2 = qt.tensor(l2,id)
for i in range(l+1,k+1):
h = qt.tensor(id,h)
l1 = qt.tensor(id,l1)
l2 = qt.tensor(id,l2)
Hlist.append(h)
L1list.append(l1)
L2list.append(l2)
# create Lindbladian
L = qt.Qobj()
H0 = 0.5*Hlist[0]
L0 = L2list[0]
#L0 = 0.*L2list[0]
L += qt.liouvillian(H0,[L0])
E0 = Id
for l in range(k-1):
E0 = qt.composite(Id,E0)
Hl = 0.5*(Hlist[l]+Hlist[l+1]+1j*(L1list[l].dag()*L2list[l+1]
-L2list[l+1].dag()*L1list[l]))
Ll = L1list[l] + L2list[l+1]
L += qt.liouvillian(Hl,[Ll])
Hk = 0.5*Hlist[k-1]
Hk = 0.5*Hlist[k-1]
Lk = L1list[k-1]
L += qt.liouvillian(Hk,[Lk])
E0.dims = L.dims
return L,E0
def L_wc_analytic(detuning=0.,
Rabi=0,
alpha=0.,
w0=0.,
Gamma=0.,
T=0.,
tol=1e-7):
energies, states = exciton_states(detuning, Rabi)
dark_proj = states[0] * states[0].dag()
bright_proj = states[1] * states[1].dag()
ct_p = states[1] * states[0].dag()
ct_m = states[0] * states[1].dag()
cross_term = (ct_p + ct_m)
epsilon = -detuning
V = Rabi / 2
eta = sqrt(epsilon**2 + 4 * V**2)
# Bath 1 (only one bath)
G = (lambda x: (DecayRate(x,
beta_f(T),
_J_underdamped,
Gamma,
w0,
imag_part=True,
alpha=alpha,
tol=tol)))
G_0 = G(0.)
G_p = G(eta)
G_m = G(-eta)
site_1 = (0.5 / eta) * ((eta + epsilon) * bright_proj +
(eta - epsilon) * dark_proj + 2 * V * cross_term)
Z_1 = (0.5 / eta) * (G_0 * ((eta + epsilon) * bright_proj +
(eta - epsilon) * dark_proj) + 2 * V *
(ct_p * G_p + ct_m * G_m))
L = -qt.spre(site_1 * Z_1) + qt.sprepost(Z_1, site_1)
L += -qt.spost(Z_1.dag() * site_1) + qt.sprepost(site_1, Z_1.dag())
return L
def L_non_rwa(H_vib,
A,
w_0,
Gamma,
T_EM,
J,
principal=False,
silent=False,
alpha=0.,
tol=1e-5):
ti = time.time()
beta = beta_f(T_EM)
eVals, eVecs = H_vib.eigenstates()
#J=J_minimal # J_minimal(omega, Gamma, omega_0)
d_dim = len(eVals)
G = 0
for i in range(d_dim):
for j in range(d_dim):
eta = eVals[i] - eVals[j]
s = eVecs[i] * (eVecs[j].dag())
#print A.matrix_element(eVecs[i].dag(), eVecs[j])
overlap = A.matrix_element(eVecs[i].dag(), eVecs[j])
s *= A.matrix_element(eVecs[i].dag(), eVecs[j])
s *= DecayRate(eta,
beta,
J,
Gamma,
w_0,
imag_part=principal,
alpha=alpha,
tol=tol)
G += s
G_dag = G.dag()
# Initialise liouvilliian
L = qt.spre(A * G) - qt.sprepost(G, A)
L += qt.spost(G_dag * A) - qt.sprepost(A, G_dag)
if not silent:
print(("Calculating non-RWA Liouvilliian took {} seconds.".format(
time.time() - ti)))
return -L
def liouvillian(epsilon, delta, J, T):
L = 0 # Initialise liouvilliian
Z = 0 # initialise operator Z
#beta = 1 /(T* 0.695)
beta = 7.683/T
eta = np.sqrt(epsilon**2 + delta**2)
# Here I define the eigenstates of the H_s
H = qt.Qobj([[-epsilon/2., delta/2],[delta/2, epsilon/2.]])
eVecs = H.eigenstates()[1]
psi_p = (1/np.sqrt(2*eta))*(np.sqrt(eta-epsilon)*qt.basis(2,0) + np.sqrt(eta+epsilon)*qt.basis(2,1))
psi_m = (-1/np.sqrt(2*eta))*(np.sqrt(eta+epsilon)*qt.basis(2,0) - np.sqrt(eta-epsilon)*qt.basis(2,1))
#print H.eigenstates()
# Jake's eigenvectors
#psi_p = (1/np.sqrt(2*eta))*(np.sqrt(eta+epsilon)*qt.basis(2,0) - np.sqrt(eta-epsilon)*qt.basis(2,1))
#psi_m = (1/np.sqrt(2*eta))*(np.sqrt(eta-epsilon)*qt.basis(2,0) + np.sqrt(eta+epsilon)*qt.basis(2,1))
sigma_z = (1/eta)*(epsilon*(psi_p*psi_p.dag()-psi_m*psi_m.dag()) + delta*(psi_p*psi_m.dag() + psi_m*psi_p.dag()))
Z = (1/eta)*(epsilon*(psi_p*psi_p.dag()-psi_m*psi_m.dag() )*Gamma(0, beta, J) + delta*(Gamma(eta, beta, J)*psi_p*psi_m.dag() + Gamma(-eta,beta, J)*psi_m*psi_p.dag()))
L += qt.spre(sigma_z*Z) - qt.sprepost(Z, sigma_z)
L += qt.spost(Z.dag()*sigma_z) - qt.sprepost(sigma_z, Z.dag())
return -L
def secular_term(state_j, state_k):
jk = state_j*state_k.dag()
kj = jk.dag()
jj = state_j*state_j.dag()
return 2*sprepost(kj, jk) - (spre(jj) + spost(jj))
a=destroy(N)
adag=a.dag()
It= qeye(N)
tm = diag(sqrt(range(1, N)),1) # Lowering operator for the transmon.
print tm
print a
#tdiag = sparse(diag(0:2:2*(Nt-1))); % Operator for dephasing.
#tdiag = Qobj(diag(range(0, N))) # Diagonal matrix for the transmon.
#tdiag_l = kron(It,tdiag) # tdiag operator multiplying rho from the left.
tm_l = spre(a) #kron(It, a) # tm operator multiplying rho from the left.
#print
#print tm_l[1]
#print
#print kron(eye(N), tm)[1]
#raise Exception
c_op_list = []
rate = gamma * (1 + N_gamma)
c_op_list.append(sqrt(rate) * a) # decay operators
Lindblad_tm = rate*(kron(a.conj(),a) -
0.5*kron(It,adag*a) -
def commutator_term1(O1, O2):
# [O1, O2*rho]
return spre(O1*O2)-sprepost(O2, O1)
def _to_qutip(self, full_space):
return qutip.spre(self.operands[0].to_qutip(full_space))
def ttmsolve(dynmaps, rho0, times, e_ops=[], learningtimes=None, tensors=None,
**kwargs):
"""
Solve time-evolution using the Transfer Tensor Method, based on a set of
precomputed dynamical maps.
Parameters
----------
dynmaps : list of :class:`qutip.Qobj`
List of precomputed dynamical maps (superoperators),
or a callback function that returns the
superoperator at a given time.
rho0 : :class:`qutip.Qobj`
Initial density matrix or state vector (ket).
times : array_like
list of times :math:`t_n` at which to compute :math:`\\rho(t_n)`.
Must be uniformily spaced.
e_ops : list of :class:`qutip.Qobj` / callback function
single operator or list of operators for which to evaluate
expectation values.
learningtimes : array_like
list of times :math:`t_k` for which we have knowledge of the dynamical
maps :math:`E(t_k)`.
tensors : array_like
optional list of precomputed tensors :math:`T_k`
kwargs : dictionary
Optional keyword arguments. See
:class:`qutip.nonmarkov.ttm.TTMSolverOptions`.
Returns
-------
output: :class:`qutip.solver.Result`
An instance of the class :class:`qutip.solver.Result`.
"""
opt = TTMSolverOptions(dynmaps=dynmaps, times=times,
learningtimes=learningtimes, **kwargs)
diff = None
if isket(rho0):
rho0 = ket2dm(rho0)
output = Result()
e_sops_data = []
if callable(e_ops):
n_expt_op = 0
expt_callback = True
else:
try:
tmp = e_ops[:]
del tmp
n_expt_op = len(e_ops)
expt_callback = False
if n_expt_op == 0:
# fall back on storing states
opt.store_states = True
for op in e_ops:
e_sops_data.append(spre(op).data)
if op.isherm and rho0.isherm:
output.expect.append(np.zeros(len(times)))
else:
output.expect.append(np.zeros(len(times), dtype=complex))
except TypeError:
raise TypeError("Argument 'e_ops' should be a callable or" +
"list-like.")
if tensors is None:
tensors, diff = _generatetensors(dynmaps, learningtimes, opt=opt)
if rho0.isoper:
# vectorize density matrix
rho0vec = operator_to_vector(rho0)
else:
# rho0 might be a super in which case we should not vectorize
rho0vec = rho0
K = len(tensors)
states = [rho0vec]
for n in range(1, len(times)):
states.append(None)
for k in range(n):
if n-k < K:
states[-1] += tensors[n-k]*states[k]
for i, r in enumerate(states):
if opt.store_states or expt_callback:
if r.type == 'operator-ket':
states[i] = vector_to_operator(r)
else:
states[i] = r
if expt_callback:
# use callback method
e_ops(times[i], states[i])
for m in range(n_expt_op):
if output.expect[m].dtype == complex:
output.expect[m][i] = expect_rho_vec(e_sops_data[m], r, 0)
else:
output.expect[m][i] = expect_rho_vec(e_sops_data[m], r, 1)
output.solver = "ttmsolve"
output.times = times
output.ttmconvergence = diff
if opt.store_states:
output.states = states
return output
def ttmsolve(dynmaps, rho0, times, e_ops=[], learningtimes=None, tensors=None,
**kwargs):
"""
Solve time-evolution using the Transfer Tensor Method, based on a set of
precomputed dynamical maps.
Parameters
----------
dynmaps : list of :class:`qutip.Qobj`
List of precomputed dynamical maps (superoperators),
or a callback function that returns the
superoperator at a given time.
rho0 : :class:`qutip.Qobj`
Initial density matrix or state vector (ket).
times : array_like
list of times :math:`t_n` at which to compute :math:`\\rho(t_n)`.
Must be uniformily spaced.
e_ops : list of :class:`qutip.Qobj` / callback function
single operator or list of operators for which to evaluate
expectation values.
learningtimes : array_like
list of times :math:`t_k` for which we have knowledge of the dynamical
maps :math:`E(t_k)`.
tensors : array_like
optional list of precomputed tensors :math:`T_k`
kwargs : dictionary
Optional keyword arguments. See
:class:`qutip.nonmarkov.ttm.TTMSolverOptions`.
Returns
-------
output: :class:`qutip.solver.Result`
An instance of the class :class:`qutip.solver.Result`.
"""
opt = TTMSolverOptions(dynmaps=dynmaps, times=times,
learningtimes=learningtimes, **kwargs)
diff = None
if isket(rho0):
rho0 = ket2dm(rho0)
output = Result()
e_sops_data = []
if callable(e_ops):
n_expt_op = 0
expt_callback = True
else:
try:
tmp = e_ops[:]
del tmp
n_expt_op = len(e_ops)
expt_callback = False
if n_expt_op == 0:
# fall back on storing states
opt.store_states = True
for op in e_ops:
e_sops_data.append(spre(op).data)
if op.isherm and rho0.isherm:
output.expect.append(np.zeros(len(times)))
else:
output.expect.append(np.zeros(len(times), dtype=complex))
except TypeError:
raise TypeError("Argument 'e_ops' should be a callable or" +
"list-like.")
if tensors is None:
tensors, diff = _generatetensors(dynmaps, learningtimes, opt=opt)
rho0vec = operator_to_vector(rho0)
K = len(tensors)
states = [rho0vec]
for n in range(1, len(times)):
states.append(None)
for k in range(n):
if n-k < K:
states[-1] += tensors[n-k]*states[k]
for i, r in enumerate(states):
if opt.store_states or expt_callback:
if r.type == 'operator-ket':
states[i] = vector_to_operator(r)
else:
states[i] = r
if expt_callback:
# use callback method
e_ops(times[i], states[i])
for m in range(n_expt_op):
if output.expect[m].dtype == complex:
output.expect[m][i] = expect_rho_vec(e_sops_data[m], r, 0)
else:
output.expect[m][i] = expect_rho_vec(e_sops_data[m], r, 1)
output.solver = "ttmsolve"
output.times = times
output.ttmconvergence = diff
if opt.store_states:
output.states = states
return output
def rcsolve(Hsys, psi0, tlist, e_ops, Q, wc, alpha, N, w_th, sparse=False,
options=None):
"""
Function to solve for an open quantum system using the
reaction coordinate (RC) model.
Parameters
----------
Hsys: Qobj
The system hamiltonian.
psi0: Qobj
Initial state of the system.
tlist: List.
Time over which system evolves.
e_ops: list of :class:`qutip.Qobj` / callback function single
Single operator or list of operators for which to evaluate
expectation values.
Q: Qobj
The coupling between system and bath.
wc: Float
Cutoff frequency.
alpha: Float
Coupling strength.
N: Integer
Number of cavity fock states.
w_th: Float
Temperature.
sparse: Boolean
Optional argument to call the sparse eigenstates solver if needed.
options : :class:`qutip.Options`
With options for the solver.
Returns
-------
output: Result
System evolution.
"""
if options is None:
options = Options()
dot_energy, dot_state = Hsys.eigenstates(sparse=sparse)
deltaE = dot_energy[1] - dot_energy[0]
if (w_th < deltaE/2):
warnings.warn("Given w_th might not provide accurate results")
gamma = deltaE / (2 * np.pi * wc)
wa = 2 * np.pi * gamma * wc # reaction coordinate frequency
g = np.sqrt(np.pi * wa * alpha / 2.0) # reaction coordinate coupling
nb = (1 / (np.exp(wa/w_th) - 1))
# Reaction coordinate hamiltonian/operators
dimensions = dims(Q)
a = tensor(destroy(N), qeye(dimensions[1]))
unit = tensor(qeye(N), qeye(dimensions[1]))
Nmax = N * dimensions[1][0]
Q_exp = tensor(qeye(N), Q)
Hsys_exp = tensor(qeye(N), Hsys)
e_ops_exp = [tensor(qeye(N), kk) for kk in e_ops]
na = a.dag() * a
xa = a.dag() + a
# decoupled Hamiltonian
H0 = wa * a.dag() * a + Hsys_exp
# interaction
H1 = (g * (a.dag() + a) * Q_exp)
H = H0 + H1
L = 0
PsipreEta = 0
PsipreX = 0
all_energy, all_state = H.eigenstates(sparse=sparse)
Apre = spre((a + a.dag()))
Apost = spost(a + a.dag())
for j in range(Nmax):
for k in range(Nmax):
A = xa.matrix_element(all_state[j].dag(), all_state[k])
delE = (all_energy[j] - all_energy[k])
if abs(A) > 0.0:
if abs(delE) > 0.0:
X = (0.5 * np.pi * gamma*(all_energy[j] - all_energy[k])
* (np.cosh((all_energy[j] - all_energy[k]) /
(2 * w_th))
/ (np.sinh((all_energy[j] - all_energy[k]) /
(2 * w_th)))) * A)
eta = (0.5 * np.pi * gamma *
(all_energy[j] - all_energy[k]) * A)
PsipreX = PsipreX + X * all_state[j] * all_state[k].dag()
PsipreEta = PsipreEta + (eta * all_state[j]
* all_state[k].dag())
else:
X = 0.5 * np.pi * gamma * A * 2 * w_th
PsipreX = PsipreX + X * all_state[j] * all_state[k].dag()
A = a + a.dag()
L = ((-spre(A * PsipreX)) + (sprepost(A, PsipreX))
+ (sprepost(PsipreX, A)) + (-spost(PsipreX * A))
+ (spre(A * PsipreEta)) + (sprepost(A, PsipreEta))
+ (-sprepost(PsipreEta, A)) + (-spost(PsipreEta * A)))
# Setup the operators and the Hamiltonian and the master equation
# and solve for time steps in tlist
rho0 = (tensor(thermal_dm(N, nb), psi0))
output = mesolve(H, rho0, tlist, [L], e_ops_exp, options=options)
return output
N_gamma = 1/(exp(wd/T)-1)# % Thermal population of the transmon phonon bath around wd. print N_gamma N = 5 # number of basis states to consider phi_arr=linspace(0.2, 0.35, 51) Ej_arr=linspace(10078, 17960, 51) w0_arr=linspace(4211, 5622, 301) a = destroy(N) adag=a.dag() #Qobj(diag(range(0, 2*N, 2))) #dephasing operator, tdiag print spre(a) #tm_l = kron(Itot,tm); tm operator multiplying rho from the left. p = -1.0j*(adag - a) # "P" operator. print p print spre(p) #p_l = kron(Itot,p) % "P" operator multiplying rho from the left. print spost(p) #p_r = kron(transpose(p),Itot) % "P" operator multiplying rho from the right. #It= qeye(N) c_op_list = [] rate = gamma * (1 + N_gamma)
def test_spre_td(self):
"Superoperator: spre, time-dependent"
assert_(spre(self.t1)(.5) == spre(self.t1(.5)))
def _to_qutip(self, full_space):
return qutip.spre(qutip.tensor(*[qutip.qeye(s.dimension) for s in full_space.local_factors()]))
def rcsolve(Hsys,
psi0,
tlist,
e_ops,
Q,
wc,
alpha,
N,
w_th,
sparse=False,
options=None):
"""
Function to solve for an open quantum system using the
reaction coordinate (RC) model.
Parameters
----------
Hsys: Qobj
The system hamiltonian.
psi0: Qobj
Initial state of the system.
tlist: List.
Time over which system evolves.
e_ops: list of :class:`qutip.Qobj` / callback function single
Single operator or list of operators for which to evaluate
expectation values.
Q: Qobj
The coupling between system and bath.
wc: Float
Cutoff frequency.
alpha: Float
Coupling strength.
N: Integer
Number of cavity fock states.
w_th: Float
Temperature.
sparse: Boolean
Optional argument to call the sparse eigenstates solver if needed.
options : :class:`qutip.Options`
With options for the solver.
Returns
-------
output: Result
System evolution.
"""
if options is None:
options = Options()
dot_energy, dot_state = Hsys.eigenstates(sparse=sparse)
deltaE = dot_energy[1] - dot_energy[0]
if (w_th < deltaE / 2):
warnings.warn("Given w_th might not provide accurate results")
gamma = deltaE / (2 * np.pi * wc)
wa = 2 * np.pi * gamma * wc # reaction coordinate frequency
g = np.sqrt(np.pi * wa * alpha / 2.0) # reaction coordinate coupling
nb = (1 / (np.exp(wa / w_th) - 1))
# Reaction coordinate hamiltonian/operators
dimensions = dims(Q)
a = tensor(destroy(N), qeye(dimensions[1]))
unit = tensor(qeye(N), qeye(dimensions[1]))
Nmax = N * dimensions[1][0]
Q_exp = tensor(qeye(N), Q)
Hsys_exp = tensor(qeye(N), Hsys)
e_ops_exp = [tensor(qeye(N), kk) for kk in e_ops]
na = a.dag() * a
xa = a.dag() + a
# decoupled Hamiltonian
H0 = wa * a.dag() * a + Hsys_exp
# interaction
H1 = (g * (a.dag() + a) * Q_exp)
H = H0 + H1
L = 0
PsipreEta = 0
PsipreX = 0
all_energy, all_state = H.eigenstates(sparse=sparse)
Apre = spre((a + a.dag()))
Apost = spost(a + a.dag())
for j in range(Nmax):
for k in range(Nmax):
A = xa.matrix_element(all_state[j].dag(), all_state[k])
delE = (all_energy[j] - all_energy[k])
if abs(A) > 0.0:
if abs(delE) > 0.0:
X = (0.5 * np.pi * gamma *
(all_energy[j] - all_energy[k]) * (np.cosh(
(all_energy[j] - all_energy[k]) /
(2 * w_th)) / (np.sinh(
(all_energy[j] - all_energy[k]) /
(2 * w_th)))) * A)
eta = (0.5 * np.pi * gamma *
(all_energy[j] - all_energy[k]) * A)
PsipreX = PsipreX + X * all_state[j] * all_state[k].dag()
PsipreEta = PsipreEta + (eta * all_state[j] *
all_state[k].dag())
else:
X = 0.5 * np.pi * gamma * A * 2 * w_th
PsipreX = PsipreX + X * all_state[j] * all_state[k].dag()
A = a + a.dag()
L = ((-spre(A * PsipreX)) + (sprepost(A, PsipreX)) +
(sprepost(PsipreX, A)) + (-spost(PsipreX * A)) +
(spre(A * PsipreEta)) + (sprepost(A, PsipreEta)) +
(-sprepost(PsipreEta, A)) + (-spost(PsipreEta * A)))
# Setup the operators and the Hamiltonian and the master equation
# and solve for time steps in tlist
rho0 = (tensor(thermal_dm(N, nb), psi0))
output = mesolve(H, rho0, tlist, [L], e_ops_exp, options=options)
return output
#w12_vec(i) = wT_vec(3)- wT_vec(2); #w23_vec(i) = wT_vec(4)- wT_vec(3); #w34_vec(i) = wT_vec(5)- wT_vec(4); H = make_H(0.2, 190, 4000.0) print H L = liouvillian(H, c_op_list) print L tr_mat = tensor([qeye(n) for n in L.dims[0][0]]) print tr_mat tr_vec = transpose(mat2vec(tr_mat.full())) print tr_vec N = prod(L.dims[0][0]) print N A = L.full() a_sup = spre(a).full() b_sup = spre(p).full() D, U = eig(A) print "D", D I = identity(N * N) w = 3.0 MMR1 = pinv(-1.0j * w * I + A) print A * MMR1 * inv(A) print U * MMR1 * inv(U) #raise Exception #A.expm() #MMR1 = pinv(1.0j * w * I + diag(D))
N_gamma = 1 / (exp(wd / T) - 1
) # % Thermal population of the transmon phonon bath around wd.
print N_gamma
N = 5 # number of basis states to consider
phi_arr = linspace(0.2, 0.35, 51)
Ej_arr = linspace(10078, 17960, 51)
w0_arr = linspace(4211, 5622, 301)
a = destroy(N)
adag = a.dag()
#Qobj(diag(range(0, 2*N, 2))) #dephasing operator, tdiag
print spre(
a) #tm_l = kron(Itot,tm); tm operator multiplying rho from the left.
p = -1.0j * (adag - a) # "P" operator.
print p
print spre(
p) #p_l = kron(Itot,p) % "P" operator multiplying rho from the left.
print spost(
p
) #p_r = kron(transpose(p),Itot) % "P" operator multiplying rho from the right.
#It= qeye(N)
c_op_list = []
def test_spre_td(self):
"Superoperator: spre, time-dependent"
assert_(spre(self.t1)(.5) == spre(self.t1(.5)))
def find_expect(phi=0.1, Omega_vec=3.0, wd=wd, use_pinv=True):
Ej = (phi**2) / (
8 * Ec
) #Ejmax*absolute(cos(pi*phi)) #; % Josephson energy as function of Phi.
wTvec = -Ej + sqrt(8.0 * Ej * Ec) * (nvec + 0.5) + Ecvec
#wdvec=nvec*sqrt(8.0*Ej*Ec)
#wdvec=nvec*wd
wT = wTvec - wdvec
transmon_levels = Qobj(diag(wT[range(N)]))
H = transmon_levels + Omega_vec #- 0.5j*(Omega_true*adag - conj(Omega_true)*a)
L = liouvillian(
H, c_op_list) #ends at same thing as L = H_comm + Lindblad_tm ;
rho_ss = steadystate(L) #same as rho_ss_c but that's in column vector form
tr_mat = tensor([qeye(n) for n in L.dims[0][0]])
#N = prod(L.dims[0][0])
A = L.full()
#D, U= L.eigenstates()
#print D.shape, D
#print diag(D)
b = spre(p).full() - spost(p).full()
a2 = spre(a).full()
tr_vec = transpose(mat2vec(tr_mat.full()))
rho = transpose(mat2vec(rho_ss.full()))
I = identity(N * N)
P = kron(transpose(rho), tr_vec)
Q = I - P
#wp=4.9
#w=-(wp-wd)
spectrum = zeros(len(wlist2), dtype=complex)
for idx, w in enumerate(wlist2):
if use_pinv:
MMR = pinv(-1.0j * w * I + A) #eig(MMR)[0] is equiv to Dint
else:
MMR = dot(Q, solve(-1.0j * w * I + A, Q))
#print diag(1.0/(1j*(wp-wd)*ones(N**2)+D)) #Dint = diag(1./(1i*(wp-wd)*diag(eye(dim^2)) + diag(D)))
#print 1.0/(1j*(wp-wd)*ones(N**2)+D) #Dint = diag(1./(1i*(wp-wd)*diag(eye(dim^2)) + diag(D)))
#U2=squeeze([u.full() for u in U]).transpose()
#Dint=eig(MMR)[0]
#print "MMR", eig(MMR)[1]
#print "Umult", U2*Dint*inv(U2)
s = dot(tr_vec, dot(a2, dot(MMR, dot(b, transpose(rho)))))
#spectrum[idx] = -2 * real(s[0, 0])
spectrum[idx] = 1j * s[0][0] #matches Chi_temp result #(1/theta_steps)
return spectrum
#final_state = steadystate(H, c_op_list)
#print H.shape
#print dir(H)
#U,D = eig(H.full())
#print D
#Uinv = Qobj(inv(D))
#U=Qobj(D)
# Doing the chi integral (gives the susceptibility)
#Dint = 1.0/(1.0j*(wp-wd)) #Qobj(1.0/(1.0j*(wp-wd)*diag(qeye(N**2))))# + diag(D))))
#Hint = H.expm() #U*H*Uinv
#Chi_temp(i,j) += (1.0/theta_steps)*1j*trace(reshape(tm_l*Lint*(p_l - p_r)*rho_ss_c,dim,dim))
#exp1=correlation_2op_1t(H, None, wlist2, c_op_list, a, p, solver="es")
#exp2=correlation_2op_1t(H, None, wlist2, c_op_list, p, a, solver="es", reverse=True)
#exp1=correlation_2op_1t(H, None, wlist2, c_op_list, a, p_l-p_r, solver="es")
#exp1=correlation_ss(H, wlist2, c_op_list, a, p)
#exp2=correlation_ss(H, wlist2, c_op_list, p, a, reverse=True)
exp1 = spectrum(H, wlist2, c_op_list, a, p, solver="pi", use_pinv=False)
exp2 = spectrum(H, wlist2, c_op_list, p, a, solver="pi", use_pinv=False)
return exp1 - exp2
return expect(a, final_state) #tm_l
Ej=1.0 wd=4.8 Omega=3.0 #print qeye(N) #print help(qeye) a=destroy(N) #equivalent to tm adag=a.dag() #print a #print a.dag() #equivalent to tp print Qobj(diag(range(0, 2*N, 2))) #dephasing operator, tdiag #print help(diag) print spre(a) #tm_l = kron(Itot,tm); p = -1.0j*(adag - a) # "P" operator. print p print spre(p) #p_l = kron(Itot,p) % "P" operator multiplying rho from the left. print spost(p) #p_r = kron(transpose(p),Itot) % "P" operator multiplying rho from the right. N_gamma=0.0 gamma=0.01 rate = gamma c_op_list=[sqrt(rate) * a,] # decay operators
import qutip as qt
import cascade
gamma = 1.0 # coupling strength to reservoir
phi = 1.*np.pi # phase shift in fb loop
eps = 2.0*np.pi*gamma # eps/2 = Rabi frequency
delta = 0. # detuning
# time delay
tau = np.pi/(eps)
print 'tau =',tau
dim_S = 2
Id = qt.spre(qt.qeye(dim_S))*qt.spost(qt.qeye(dim_S))
# Hamiltonian and jump operators
H_S = delta*qt.sigmap()*qt.sigmam() + eps*(qt.sigmam()+qt.sigmap())
L1 = sp.sqrt(gamma)*qt.sigmam()
L2 = sp.exp(1j*phi)*L1
# initial state
rho0 = qt.ket2dm(qt.basis(2,0))
# times to evaluate rho(t)
tlist=np.arange(0.0001,2*tau,0.01)
def run(rho0=rho0,tau=tau,tlist=tlist):
# run feedback simulation
opts = qt.Options()
def outfieldpropagator(self, blist, tlist, tau, c1=None, c2=None,
notrace=False):
r"""
Compute propagator for computing output field expectation values
<O_n(tn)...O_2(t2)O_1(t1)> for times t1,t2,... and
O_i = I, b_out, b_out^\dagger, b_loop, b_loop^\dagger
Parameters
----------
blist : array_like
List of integers specifying the field operators:
0: I (nothing)
1: b_out
2: b_out^\dagger
3: b_loop
4: b_loop^\dagger
tlist : array_like
list of corresponding times t1,..,tn at which to evaluate the field
operators
tau : float
time-delay
c1 : :class:`qutip.Qobj`
system collapse operator that couples to the in-loop field in
question (only needs to be specified if self.L1 has more than one
element)
c2 : :class:`qutip.Qobj`
system collapse operator that couples to the output field in
question (only needs to be specified if self.L2 has more than one
element)
notrace : bool {False}
If this optional is set to True, a propagator is returned for a
cascade of k systems, where :math:`(k-1) tau < t < k tau`.
If set to False (default), a generalized partial trace is performed
and a propagator for a single system is returned.
Returns
-------
: :class:`qutip.Qobj`
time-propagator for computing field correlation function
"""
if c1 is None and len(self.L1) == 1:
c1 = self.L1[0]
else:
raise ValueError('Argument c1 has to be specified when more than' +
'one collapse operator couples to the feedback' +
'loop.')
if c2 is None and len(self.L2) == 1:
c2 = self.L2[0]
else:
raise ValueError('Argument c1 has to be specified when more than' +
'one collapse operator couples to the feedback' +
'loop.')
klist = []
slist = []
for t in tlist:
klist.append(int(t/tau)+1)
slist.append(t-(klist[-1]-1)*tau)
kmax = max(klist)
zipped = sorted(zip(slist, klist, blist))
slist = [s for (s, k, b) in zipped]
klist = [k for (s, k, b) in zipped]
blist = [b for (s, k, b) in zipped]
G1, E0 = _generator(kmax, self.H_S, self.L1, self.L2, self.S_matrix,
self.c_ops_markov)
sprev = 0.
E = E0
for i, s in enumerate(slist):
E = _integrate(G1, E, sprev, s, integrator=self.integrator,
parallel=self.parallel, opt=self.options)
if klist[i] == 1:
l1 = 0.*qt.Qobj()
else:
l1 = _localop(c1, klist[i]-1, kmax)
l2 = _localop(c2, klist[i], kmax)
if blist[i] == 0:
superop = self.Id
elif blist[i] == 1:
superop = qt.spre(l1+l2)
elif blist[i] == 2:
superop = qt.spost(l1.dag()+l2.dag())
elif blist[i] == 3:
superop = qt.spre(l1)
elif blist[i] == 4:
superop = qt.spost(l1.dag())
else:
raise ValueError('Allowed values in blist are 0, 1, 2, 3 ' +
'and 4.')
superop.dims = E.dims
E = superop*E
sprev = s
E = _integrate(G1, E, slist[-1], tau, integrator=self.integrator,
parallel=self.parallel, opt=self.options)
E.dims = E0.dims
if not notrace:
E = _genptrace(E, kmax)
return E
def hsolve(H, psi0, tlist, Q, gam, lam0, Nc, N, w_th, options=None):
"""
Function to solve for an open quantum system using the
hierarchy model.
Parameters
----------
H: Qobj
The system hamiltonian.
psi0: Qobj
Initial state of the system.
tlist: List.
Time over which system evolves.
Q: Qobj
The coupling between system and bath.
gam: Float
Bath cutoff frequency.
lam0: Float
Coupling strength.
Nc: Integer
Cutoff parameter.
N: Integer
Number of matsubara terms.
w_th: Float
Temperature.
options : :class:`qutip.Options`
With options for the solver.
Returns
-------
output: Result
System evolution.
"""
if options is None:
options = Options()
# Set up terms of the matsubara and tanimura boundaries
# Parameters and hamiltonian
hbar = 1.
kb = 1.
# Set by system
dimensions = dims(H)
Nsup = dimensions[0][0] * dimensions[0][0]
unit = qeye(dimensions[0])
# Ntot is the total number of ancillary elements in the hierarchy
Ntot = int(round(factorial(Nc+N) / (factorial(Nc) * factorial(N))))
c0 = (lam0 * gam * (_cot(gam * hbar / (2. * kb * w_th)) - (1j))) / hbar
LD1 = (-2. * spre(Q) * spost(Q.dag()) + spre(Q.dag()*Q) + spost(Q.dag()*Q))
pref = ((2. * lam0 * kb * w_th / (gam * hbar)) - 1j * lam0) / hbar
gj = 2 * np.pi * kb * w_th / hbar
L12 = -pref * LD1 + (c0 / gam) * LD1
for i1 in range(1, N):
num = (4 * lam0 * gam * kb * w_th * i1 * gj/((i1 * gj)**2 - gam**2))
ci = num / (hbar**2)
L12 = L12 + (ci / gj) * LD1
# Setup liouvillian
L = liouvillian(H, [L12])
Ltot = L.data
unit = sp.eye(Ntot,format='csr')
Lbig = sp.kron(unit, Ltot)
rho0big1 = np.zeros((Nsup * Ntot), dtype=complex)
# Prepare initial state:
rhotemp = mat2vec(np.array(psi0.full(), dtype=complex))
for idx, element in enumerate(rhotemp):
rho0big1[idx] = element[0]
nstates, state2idx, idx2state = enr_state_dictionaries([Nc+1]*(N), Nc)
for nlabelt in state_number_enumerate([Nc+1]*(N), Nc):
nlabel = list(nlabelt)
ntotalcheck = 0
for ncheck in range(N):
ntotalcheck = ntotalcheck + nlabel[ncheck]
current_pos = int(round(state2idx[tuple(nlabel)]))
Ltemp = sp.lil_matrix((Ntot, Ntot))
Ltemp[current_pos, current_pos] = 1
Ltemp.tocsr()
Lbig = Lbig + sp.kron(Ltemp, (-nlabel[0] * gam * spre(unit).data))
for kcount in range(1, N):
counts = -nlabel[kcount] * kcount * gj * spre(unit).data
Lbig = Lbig + sp.kron(Ltemp, counts)
for kcount in range(N):
if nlabel[kcount] >= 1:
# find the position of the neighbour
nlabeltemp = copy(nlabel)
nlabel[kcount] = nlabel[kcount] - 1
current_pos2 = int(round(state2idx[tuple(nlabel)]))
Ltemp = sp.lil_matrix((Ntot, Ntot))
Ltemp[current_pos, current_pos2] = 1
Ltemp.tocsr()
# renormalized version:
ci = (4 * lam0 * gam * kb * w_th * kcount
* gj/((kcount * gj)**2 - gam**2)) / (hbar**2)
if kcount == 0:
Lbig = Lbig + sp.kron(Ltemp, (-1j
* (np.sqrt(nlabeltemp[kcount]
/ abs(c0)))
* ((c0) * spre(Q).data
- (np.conj(c0))
* spost(Q).data)))
if kcount > 0:
ci = (4 * lam0 * gam * kb * w_th * kcount
* gj/((kcount * gj)**2 - gam**2)) / (hbar**2)
Lbig = Lbig + sp.kron(Ltemp, (-1j
* (np.sqrt(nlabeltemp[kcount]
/ abs(ci)))
* ((ci) * spre(Q).data
- (np.conj(ci))
* spost(Q).data)))
nlabel = copy(nlabeltemp)
for kcount in range(N):
if ntotalcheck <= (Nc-1):
nlabeltemp = copy(nlabel)
nlabel[kcount] = nlabel[kcount] + 1
current_pos3 = int(round(state2idx[tuple(nlabel)]))
if current_pos3 <= (Ntot):
Ltemp = sp.lil_matrix((Ntot, Ntot))
Ltemp[current_pos, current_pos3] = 1
Ltemp.tocsr()
# renormalized
if kcount == 0:
Lbig = Lbig + sp.kron(Ltemp, -1j
* (np.sqrt((nlabeltemp[kcount]+1)
* abs(c0)))
* (spre(Q) - spost(Q)).data)
if kcount > 0:
ci = (4 * lam0 * gam * kb * w_th * kcount
* gj/((kcount * gj)**2 - gam**2)) / (hbar**2)
Lbig = Lbig + sp.kron(Ltemp, -1j
* (np.sqrt((nlabeltemp[kcount]+1)
* abs(ci)))
* (spre(Q) - spost(Q)).data)
nlabel = copy(nlabeltemp)
output = []
for element in rhotemp:
output.append([])
r = scipy.integrate.ode(cy_ode_rhs)
Lbig2 = Lbig.tocsr()
r.set_f_params(Lbig2.data, Lbig2.indices, Lbig2.indptr)
r.set_integrator('zvode', method=options.method, order=options.order,
atol=options.atol, rtol=options.rtol,
nsteps=options.nsteps, first_step=options.first_step,
min_step=options.min_step, max_step=options.max_step)
r.set_initial_value(rho0big1, tlist[0])
dt = tlist[1] - tlist[0]
for t_idx, t in enumerate(tlist):
r.integrate(r.t + dt)
for idx, element in enumerate(rhotemp):
output[idx].append(r.y[idx])
return output
def _to_qutip(self, full_space):
return qutip.spre(ZeroOperator.to_qutip(full_space))
def find_expect(phi=0.1, Omega_vec=3.0, wd=wd, use_pinv=True):
Ej = (phi**2)/(8*Ec) #Ejmax*absolute(cos(pi*phi)) #; % Josephson energy as function of Phi.
wTvec = -Ej + sqrt(8.0*Ej*Ec)*(nvec+0.5)+Ecvec
#wdvec=nvec*sqrt(8.0*Ej*Ec)
#wdvec=nvec*wd
wT = wTvec-wdvec
transmon_levels = Qobj(diag(wT[range(N)]))
H=transmon_levels +Omega_vec #- 0.5j*(Omega_true*adag - conj(Omega_true)*a)
L=liouvillian(H, c_op_list) #ends at same thing as L = H_comm + Lindblad_tm ;
rho_ss = steadystate(L) #same as rho_ss_c but that's in column vector form
tr_mat = tensor([qeye(n) for n in L.dims[0][0]])
#N = prod(L.dims[0][0])
A = L.full()
#D, U= L.eigenstates()
#print D.shape, D
#print diag(D)
b = spre(p).full()-spost(p).full()
a2 = spre(a).full()
tr_vec = transpose(mat2vec(tr_mat.full()))
rho = transpose(mat2vec(rho_ss.full()))
I = identity(N * N)
P = kron(transpose(rho), tr_vec)
Q = I - P
#wp=4.9
#w=-(wp-wd)
spectrum = zeros(len(wlist2), dtype=complex)
for idx, w in enumerate(wlist2):
if use_pinv:
MMR = pinv(-1.0j * w * I + A) #eig(MMR)[0] is equiv to Dint
else:
MMR = dot(Q, solve(-1.0j * w * I + A, Q))
#print diag(1.0/(1j*(wp-wd)*ones(N**2)+D)) #Dint = diag(1./(1i*(wp-wd)*diag(eye(dim^2)) + diag(D)))
#print 1.0/(1j*(wp-wd)*ones(N**2)+D) #Dint = diag(1./(1i*(wp-wd)*diag(eye(dim^2)) + diag(D)))
#U2=squeeze([u.full() for u in U]).transpose()
#Dint=eig(MMR)[0]
#print "MMR", eig(MMR)[1]
#print "Umult", U2*Dint*inv(U2)
s = dot(tr_vec,
dot(a2, dot(MMR, dot(b, transpose(rho)))))
#spectrum[idx] = -2 * real(s[0, 0])
spectrum[idx]=1j*s[0][0] #matches Chi_temp result #(1/theta_steps)
return spectrum
#final_state = steadystate(H, c_op_list)
#print H.shape
#print dir(H)
#U,D = eig(H.full())
#print D
#Uinv = Qobj(inv(D))
#U=Qobj(D)
# Doing the chi integral (gives the susceptibility)
#Dint = 1.0/(1.0j*(wp-wd)) #Qobj(1.0/(1.0j*(wp-wd)*diag(qeye(N**2))))# + diag(D))))
#Hint = H.expm() #U*H*Uinv
#Chi_temp(i,j) += (1.0/theta_steps)*1j*trace(reshape(tm_l*Lint*(p_l - p_r)*rho_ss_c,dim,dim))
#exp1=correlation_2op_1t(H, None, wlist2, c_op_list, a, p, solver="es")
#exp2=correlation_2op_1t(H, None, wlist2, c_op_list, p, a, solver="es", reverse=True)
#exp1=correlation_2op_1t(H, None, wlist2, c_op_list, a, p_l-p_r, solver="es")
#exp1=correlation_ss(H, wlist2, c_op_list, a, p)
#exp2=correlation_ss(H, wlist2, c_op_list, p, a, reverse=True)
exp1=spectrum(H, wlist2, c_op_list, a, p, solver="pi", use_pinv=False)
exp2=spectrum(H, wlist2, c_op_list, p, a, solver="pi", use_pinv=False)
return exp1-exp2
return expect( a, final_state) #tm_l
def outfieldpropagator(self, blist, tlist, tau, c1=None, c2=None,
notrace=False):
"""
Compute propagator for computing output field expectation values
<O_n(tn)...O_2(t2)O_1(t1)> for times t1,t2,... and
O_i = I, b_out, b_out^\dagger, b_loop, b_loop^\dagger
Parameters
----------
blist : array_like
List of integers specifying the field operators:
0: I (nothing)
1: b_out
2: b_out^\dagger
3: b_loop
4: b_loop^\dagger
tlist : array_like
list of corresponding times t1,..,tn at which to evaluate the field
operators
tau : float
time-delay
c1 : :class:`qutip.Qobj`
system collapse operator that couples to the in-loop field in
question (only needs to be specified if self.L1 has more than one
element)
c2 : :class:`qutip.Qobj`
system collapse operator that couples to the output field in
question (only needs to be specified if self.L2 has more than one
element)
notrace : bool {False}
If this optional is set to True, a propagator is returned for a
cascade of k systems, where :math:`(k-1) tau < t < k tau`.
If set to False (default), a generalized partial trace is performed
and a propagator for a single system is returned.
Returns
-------
: :class:`qutip.Qobj`
time-propagator for computing field correlation function
"""
if c1 is None and len(self.L1) == 1:
c1 = self.L1[0]
else:
raise ValueError('Argument c1 has to be specified when more than' +
'one collapse operator couples to the feedback' +
'loop.')
if c2 is None and len(self.L2) == 1:
c2 = self.L2[0]
else:
raise ValueError('Argument c1 has to be specified when more than' +
'one collapse operator couples to the feedback' +
'loop.')
klist = []
slist = []
for t in tlist:
klist.append(int(t/tau)+1)
slist.append(t-(klist[-1]-1)*tau)
kmax = max(klist)
zipped = sorted(zip(slist, klist, blist))
slist = [s for (s, k, b) in zipped]
klist = [k for (s, k, b) in zipped]
blist = [b for (s, k, b) in zipped]
G1, E0 = _generator(kmax, self.H_S, self.L1, self.L2, self.S_matrix,
self.c_ops_markov)
sprev = 0.
E = E0
for i, s in enumerate(slist):
E = _integrate(G1, E, sprev, s, integrator=self.integrator,
parallel=self.parallel, opt=self.options)
if klist[i] == 1:
l1 = 0.*qt.Qobj()
else:
l1 = _localop(c1, klist[i]-1, kmax)
l2 = _localop(c2, klist[i], kmax)
if blist[i] == 0:
superop = self.Id
elif blist[i] == 1:
superop = qt.spre(l1+l2)
elif blist[i] == 2:
superop = qt.spost(l1.dag()+l2.dag())
elif blist[i] == 3:
superop = qt.spre(l1)
elif blist[i] == 4:
superop = qt.spost(l1.dag())
else:
raise ValueError('Allowed values in blist are 0, 1, 2, 3 ' +
'and 4.')
superop.dims = E.dims
E = superop*E
sprev = s
E = _integrate(G1, E, slist[-1], tau, integrator=self.integrator,
parallel=self.parallel, opt=self.options)
E.dims = E0.dims
if not notrace:
E = _genptrace(E, kmax)
return E
def lin_construct(O):
Od = O.dag()
L = 2. * spre(O) * spost(Od) - spre(Od * O) - spost(Od * O)
return L