def test_GGAG_at_same_position(self):
library = ("AGGAGCCATCTTCTATCT",
"AGGAGAGAGTTATCCGAC")
motif = "GGAG"
expected = [0, 2, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0]
results = Sequences.motif_position_counts(library, motif)
self.assertEqual(expected, results)
def test_nothing(self):
library = ("A"*18, "G"*18, "C"*18)
motif = "UUU"
results = Sequences.motif_position_counts(library, motif)
self.assertEqual([0]*18, results)
