def assign_xyzp_keys(nets):
"""Return a dictionary mapping a net to a unique key indicating the XYZP
co-ordinate of the source of the net.
"""
# Create the XYZP-formatted bit field
xyzp_bf = BitField()
xyzp_bf.add_field("x", length=8, start_at=24)
xyzp_bf.add_field("y", length=8, start_at=16)
xyzp_bf.add_field("z", length=8, start_at=8)
xyzp_bf.add_field("p", length=5, start_at=3)
xyzp_bf.assign_fields() # Fix the bitfield sizing
# Prepare to store the nets and keys
net_keys = dict()
# For each net look at the placement of the source vertex and hence
# generate a key.
for net in nets:
# Get the originating co-ordinates
x, y, p = net.source
# Get the minimal xyz co-ordinate
x, y, z = minimise_xyz(to_xyz((x, y)))
# Generate the key and mask
bf = xyzp_bf(x=x, y=y, z=abs(z), p=p)
net_keys[net] = bf.get_value(), bf.get_mask()
return net_keys
def assign_hilbert_keys(nets, machine):
"""Return a dictionary mapping a net to a unique key indicating the
position of the originating chip along a Hilbert curve mapped to the
SpiNNaker machine.
"""
# Create the Hilbert-formatted bit field
hilbert_bf = BitField()
hilbert_bf.add_field("index", length=16, start_at=16)
hilbert_bf.add_field("p", length=5, start_at=3)
hilbert_bf.assign_fields() # Fix the bitfield sizing
# Prepare to store the nets and keys
net_keys = dict()
# Generate an appropriately scaled Hilbert curve
curve = {(x, y): i
for i, (x, y) in enumerate(chip
for chip in hilbert_chip_order(machine)
if chip in machine)}
# For each net look at the placement of the source vertex and hence
# generate a key.
for net in nets:
# Get the originating co-ordinates
x, y, p = net.source
# Generate the key and mask
bf = hilbert_bf(index=curve[(x, y)], p=p)
net_keys[net] = bf.get_value(), bf.get_mask()
return net_keys
def assign_hilbert_keys(nets, machine):
"""Return a dictionary mapping a net to a unique key indicating the
position of the originating chip along a Hilbert curve mapped to the
SpiNNaker machine.
"""
# Create the Hilbert-formatted bit field
hilbert_bf = BitField()
hilbert_bf.add_field("index", length=16, start_at=16)
hilbert_bf.add_field("p", length=5, start_at=3)
hilbert_bf.assign_fields() # Fix the bitfield sizing
# Prepare to store the nets and keys
net_keys = dict()
# Generate an appropriately scaled Hilbert curve
curve = {(x, y): i for i, (x, y) in enumerate(
chip for chip in hilbert_chip_order(machine) if chip in machine)
}
# For each net look at the placement of the source vertex and hence
# generate a key.
for net in nets:
# Get the originating co-ordinates
x, y, p = net.source
# Generate the key and mask
bf = hilbert_bf(index=curve[(x, y)], p=p)
net_keys[net] = bf.get_value(), bf.get_mask()
return net_keys
def assign_random_keys(nets, machine, seed, n_bits):
"""Return a dictionary mapping a net to a unique randomly-assigned key.
"""
# Ensure sufficient bits available
assert n_bits >= np.ceil(np.log2(machine.width * machine.height * 17))
# Create the RND-formatted bit field
rnd_bf = BitField()
rnd_bf.add_field("index", length=n_bits)
rnd_bf.assign_fields() # Fix the bitfield sizing
# Prepare to store the nets and keys
net_keys = dict()
# Assign a unique random ID to each core
random.seed(seed)
ids = random.sample(range(1 << n_bits),
machine.width * machine.height * 17)
# For each net look at the placement of the source vertex and hence
# generate a key.
for net, index in zip(nets, ids):
# Generate the key and mask
bf = rnd_bf(index=index)
net_keys[net] = bf.get_value(), bf.get_mask()
return net_keys
def assign_xyzp_keys(nets):
"""Return a dictionary mapping a net to a unique key indicating the XYZP
co-ordinate of the source of the net.
"""
# Create the XYZP-formatted bit field
xyzp_bf = BitField()
xyzp_bf.add_field("x", length=8, start_at=24)
xyzp_bf.add_field("y", length=8, start_at=16)
xyzp_bf.add_field("z", length=8, start_at=8)
xyzp_bf.add_field("p", length=5, start_at=3)
xyzp_bf.assign_fields() # Fix the bitfield sizing
# Prepare to store the nets and keys
net_keys = dict()
# For each net look at the placement of the source vertex and hence
# generate a key.
for net in nets:
# Get the originating co-ordinates
x, y, p = net.source
# Get the minimal xyz co-ordinate
x, y, z = minimise_xyz(to_xyz((x, y)))
# Generate the key and mask
bf = xyzp_bf(x=x, y=y, z=abs(z), p=p)
net_keys[net] = bf.get_value(), bf.get_mask()
return net_keys
def assign_random_keys(nets, machine, seed, n_bits):
"""Return a dictionary mapping a net to a unique randomly-assigned key.
"""
# Ensure sufficient bits available
assert n_bits >= np.ceil(np.log2(machine.width * machine.height * 17))
# Create the RND-formatted bit field
rnd_bf = BitField()
rnd_bf.add_field("index", length=n_bits)
rnd_bf.assign_fields() # Fix the bitfield sizing
# Prepare to store the nets and keys
net_keys = dict()
# Assign a unique random ID to each core
random.seed(seed)
ids = random.sample(range(1 << n_bits),
machine.width * machine.height * 17)
# For each net look at the placement of the source vertex and hence
# generate a key.
for net, index in zip(nets, ids):
# Generate the key and mask
bf = rnd_bf(index=index)
net_keys[net] = bf.get_value(), bf.get_mask()
return net_keys
def ks():
keyspace = BitField()
keyspace.add_field("x", length=8, start_at=24, tags="routing")
keyspace.add_field("y", length=8, start_at=16, tags="routing")
keyspace.add_field("p", length=5, start_at=11, tags="routing")
keyspace.add_field("c", length=11, start_at=0)
keyspace.assign_fields()
return keyspace
def ks():
keyspace = BitField()
keyspace.add_field("x", length=8, start_at=24, tags="routing")
keyspace.add_field("y", length=8, start_at=16, tags="routing")
keyspace.add_field("p", length=5, start_at=11, tags="routing")
keyspace.add_field("c", length=11, start_at=0)
keyspace.assign_fields()
return keyspace
class ConvNet(object):
def __init__(self, neuron_threshold, neuron_decay, test_data,
timer_period_us=20000, sim_ticks=200, num_profile_samples=None):
# Cache network parameters
self._neuron_threshold = neuron_threshold
self._neuron_decay = neuron_decay
self._test_data = test_data
self._timer_period_us = timer_period_us
self._sim_ticks = sim_ticks
self._num_profile_samples = num_profile_samples
self._vert_index = 0
# Create data structures
self._layers = []
self._vertex_applications = {}
self._vertex_resources = {}
# Create a 32-bit keyspace
self._keyspace = BitField(32)
self._keyspace.add_field("vert_index", tags="routing")
self._keyspace.add_field("z", start_at=16)
self._keyspace.add_field("y", length=8, start_at=8)
self._keyspace.add_field("x", length=8, start_at=0)
# ------------------------------------------------------------------------
# Public methods
# ------------------------------------------------------------------------
def add_layer(self, output_width, output_height, padding, stride, weights,
record_spikes):
# Get index of new layer
layer_index = len(self._layers)
# Add layer to conv net
self._layers.append(
ConvNeuronLayer(start_vert_index=self._vert_index,
output_width=output_width,
output_height=output_height,
padding=padding, stride=stride,
neuron_decay=self._neuron_decay,
neuron_threshold=self._neuron_threshold,
record_spikes=record_spikes,
weights=weights, parent_keyspace=self._keyspace,
input_data=(self._test_data if layer_index == 0
else None),
vertex_applications=self._vertex_applications,
vertex_resources=self._vertex_resources,
timer_period_us=self._timer_period_us,
sim_ticks=self._sim_ticks,
num_profile_samples=self._num_profile_samples))
# **YUCK** update vertex index
self._vert_index += len(self._layers[-1].vertices)
def run(self, spinnaker_hostname, disable_software_watchdog=False):
logger.info("Assigning keyspaces")
# Finalise keyspace fields
self._keyspace.assign_fields()
# Extract position and length of z-field in keyspace
z_loc, z_length = self._keyspace.get_location_and_length("z")
z_mask = (1 << z_length) - 1
logger.debug("Z location:%u, length:%u, mask:%08x",
z_loc, z_length, z_mask)
# Loop through layers and their successors
logger.info("Building nets")
nets = []
net_keys = {}
for layer, next_layer in zip(self._layers[:-1], self._layers[1:]):
# Loop through all vertices in layer
for vertex in layer.vertices:
# Create a key for the vertex feeding forward
net_key = (vertex.routing_key, vertex.routing_mask)
# Create a net connecting vertex
# to all vertices in next layer
net = Net(vertex, next_layer.vertices)
# Add net to list and associate with key
nets.append(net)
net_keys[net] = net_key
machine_controller = None
try:
# Get machine controller from connected SpiNNaker board and boot
machine_controller = MachineController(spinnaker_hostname)
machine_controller.boot()
# Get system info
system_info = machine_controller.get_system_info()
logger.debug("Found %u chip machine", len(system_info))
# Place-and-route
logger.info("Placing and routing")
placements, allocations, run_app_map, routing_tables =\
place_and_route_wrapper(self._vertex_resources,
self._vertex_applications,
nets, net_keys, system_info)
# Convert placement values to a set to get unique list of chips
unique_chips = set(itervalues(placements))
logger.info("Placed on %u cores (%u chips)",
len(placements), len(unique_chips))
logger.debug(list(itervalues(placements)))
# If software watchdog is disabled, write zero to each chip in
# placement's SV struct, otherwise, write default from SV struct file
wdog = (0 if disable_software_watchdog else
machine_controller.structs["sv"]["soft_wdog"].default)
for x, y in unique_chips:
logger.debug("Setting software watchdog to %u for chip %u, %u",
wdog, x, y)
machine_controller.write_struct_field("sv", "soft_wdog",
wdog, x, y)
logger.info("Loading layers")
for i, l in enumerate(self._layers):
logger.info("\tLayer %u", i)
l.load(placements, allocations, machine_controller, z_mask)
# Load routing tables and applications
logger.info("Loading routing tables")
machine_controller.load_routing_tables(routing_tables)
logger.info("Loading applications")
machine_controller.load_application(run_app_map)
# Wait for all cores to hit SYNC0
logger.info("Waiting for synch")
num_verts = len(self._vertex_resources)
self._wait_for_transition(placements, allocations,
machine_controller,
AppState.init, AppState.sync0,
num_verts)
# Sync!
machine_controller.send_signal("sync0")
# Wait for simulation to complete
logger.info("Simulating")
time.sleep(float(self._timer_period_us * self._sim_ticks) / 1000000.0)
# Wait for all cores to exit
logger.info("Waiting for exit")
self._wait_for_transition(placements, allocations,
machine_controller,
AppState.run, AppState.exit,
num_verts)
logger.info("Reading stats")
for i, l in enumerate(self._layers):
stats = l.read_statistics()
logger.info("\tLayer %u", i)
logger.info("\t\tInput buffer overflows:%u",
np.sum(stats["input_buffer_overflows"]))
logger.info("\t\tTask queue overflows:%u",
np.sum(stats["task_queue_full"]))
logger.info("\t\tTimer event overruns:%u",
np.sum(stats["timer_event_overflows"]))
logger.info("\t\tSpikes emitted:%u",
np.sum(stats["spikes_emitted"]))
logger.info("\t\tSpikes convolved:%u",
np.sum(stats["spikes_convolved"]))
if self._num_profile_samples is not None:
logger.info("Reading profiling data")
timestep_ms = self._timer_period_us / 1000.0
duration_ms = timestep_ms * self._sim_ticks
for i, l in enumerate(self._layers):
profiling_data = l.read_profile()[0][1]
logger.info("\tLayer %u", i)
#print profiling_data
profiling.print_summary(profiling_data, duration_ms,
timestep_ms)
#logger.info("Downloading spikes")
# Save off layer data
for i, l in enumerate(self._layers):
spikes = l.read_recorded_spikes()
np.save("layer_%u.npy" % i, spikes)
finally:
if machine_controller is not None:
logger.info("Stopping SpiNNaker application")
machine_controller.send_signal("stop")
# ------------------------------------------------------------------------
# Private methods
# ------------------------------------------------------------------------
def _wait_for_transition(self, placements, allocations, machine_controller,
from_state, to_state,
num_verts, timeout=5.0):
while True:
# If no cores are still in from_state, stop
if machine_controller.count_cores_in_state(from_state) == 0:
break
# Wait a bit
time.sleep(1.0)
# Wait for all cores to reach to_state
cores_in_to_state =\
machine_controller.wait_for_cores_to_reach_state(
to_state, num_verts, timeout=timeout)
if cores_in_to_state != num_verts:
# Loop through all placed vertices
for vertex, (x, y) in iteritems(placements):
p = allocations[vertex][machine.Cores].start
status = machine_controller.get_processor_status(p, x, y)
if status.cpu_state is not to_state:
print("Core ({}, {}, {}) in state {!s}".format(
x, y, p, status))
print machine_controller.get_iobuf(p, x, y)
raise Exception("Unexpected core failures "
"before reaching %s state (%u/%u)." % (to_state, cores_in_to_state, num_verts))
def __call__(self, application_graph, graph_mapper, machine_graph,
n_keys_map):
"""
:param application_graph: The application graph
:param graph_mapper: the mapping between graphs
:param machine_graph: the machine graph
:param n_keys_map: the mapping between edges and n keys
:return: routing information objects
"""
progress_bar = ProgressBar(
machine_graph.n_outgoing_edge_partitions * 3,
"Allocating routing keys")
# ensure groups are stable and correct
self._determine_groups(
machine_graph, graph_mapper, application_graph, n_keys_map,
progress_bar)
# define the key space
bit_field_space = BitField(32)
field_positions = set()
# locate however many types of constraints there are
seen_fields = deduce_types(machine_graph)
progress_bar.update(machine_graph.n_outgoing_edge_partitions)
if len(seen_fields) > 1:
self._adds_application_field_to_the_fields(seen_fields)
# handle the application space
self._create_application_space_in_the_bit_field_space(
bit_field_space, seen_fields, field_positions)
# assign fields to positions in the space
bit_field_space.assign_fields()
# get positions of the flexible fields:
self._assign_flexi_field_positions(
bit_field_space, seen_fields, field_positions)
# create routing_info_allocator
routing_info = RoutingInfo()
seen_mask_instances = 0
# extract keys and masks for each edge from the bitfield
for partition in machine_graph.outgoing_edge_partitions:
# get keys and masks
keys_and_masks, seen_mask_instances = \
self._extract_keys_and_masks_from_bit_field(
partition, bit_field_space, n_keys_map,
seen_mask_instances)
# update routing info for each edge in the partition
partition_info = PartitionRoutingInfo(keys_and_masks, partition)
routing_info.add_partition_info(partition_info)
# update the progress bar again
progress_bar.update()
progress_bar.end()
return routing_info, field_positions
