def create_da_bry_std(filename,
eta_rho=10,
xi_rho=10,
s_rho=1,
bry=4,
reftime=default_epoch,
clobber=False,
cdl=None,
title="My BRY STD"):
"""
Create a boundaries standard deviation file
Parameters
----------
filename : string
name and path of file to create
eta_rho: int, optional
number of rows in the eta direction
xi_rho: int, optional
number of columns in the xi direction
s_rho: int, optional
number of s-levels
bry: int, optional
number of open boundaries to specify
reftime: datetime, optional
date of epoch for time origin in netcdf
clobber: bool, optional
If True, clobber any existing files and recreate. If False, use
the existing file definition
cdl: string, optional,
Use the specified CDL file as the definition for the new
netCDF file.
title: string, optional
netcdf attribute title
Returns
-------
nc, netCDF4 object
"""
# Generate the Structure
dims, vars, attr = cdl_parser(_cdl_dir +
"s4dvar_std_b.cdl" if cdl is None else cdl)
# Fill in the appropriate dimension values
dims = _set_grid_dimensions(dims, eta_rho, xi_rho, s_rho)
dims["IorJ"] = max(eta_rho, xi_rho)
dims["boundary"] = bry
vars = _set_time_ref(vars, "ocean_time", reftime)
# Create the file
_nc = ncgen(filename,
dims=dims,
vars=vars,
attr=attr,
clobber=clobber,
title=title)
# Return the new file
return _nc
def _create_generic_file(filename,
cdl,
eta_rho,
xi_rho,
s_rho,
reftime=None,
clobber=False,
title="ROMS"):
"""
internal method: Generic file creator that uses ocean_time
"""
# Generate the Structure
dims, vars, attr = cdl_parser(cdl)
# Fill in the appropriate dimension values
dims = _set_grid_dimensions(dims, eta_rho, xi_rho, s_rho)
if reftime is not None:
vars = _set_time_ref(vars, "ocean_time", reftime)
# Create the file
_nc = ncgen(filename,
dims=dims,
vars=vars,
attr=attr,
clobber=clobber,
title=title)
# Return the new file
return _nc
def create_frc_direct(filename,
eta_rho=10,
xi_rho=10,
reftime=default_epoch,
clobber=False,
cdl=None,
title="My Forcing"):
"""
Create a direct surface forcing file
Parameters
----------
filename : string
name and path of file to create
eta_rho: int, optional
number of rows in the eta direction
xi_rho: int, optional
number of columns in the xi direction
reftime: datetime, optional
date of epoch for time origin in netcdf
clobber: bool, optional
If True, clobber any existing files and recreate. If False, use
the existing file definition
cdl: string, optional,
Use the specified CDL file as the definition for the new
netCDF file.
title: string, optional
netcdf attribute title
Returns
-------
nc, netCDF4 object
"""
# Generate the Structure
dims, vars, attr = cdl_parser(_cdl_dir +
"frc_direct.cdl" if cdl is None else cdl)
# Fill in the appropriate dimension values
dims = {
'y_rho': eta_rho,
'y_u': eta_rho,
'y_v': eta_rho - 1,
'x_rho': xi_rho,
'x_u': xi_rho - 1,
'x_v': xi_rho,
'frc_time': 0
}
vars = _set_time_ref(vars, 'frc_time', reftime)
# Create the file
_nc = ncgen(filename,
dims=dims,
vars=vars,
attr=attr,
clobber=clobber,
title=title)
# Return the new file
return _nc
def create_zlevel(filename, lat=10, lon=10, depth=1,
reftime=default_epoch,
clobber=False, cdl=None,
title="Zlevel Model Data", dims=2):
"""
Create an time varying model standard deviation file
Parameters
----------
filename : string
name and path of file to create
lat: int, optional
number of latitudinal rows
lon: int, optional
number of longitudinal columns
depth: int, optional
number of z-levels
reftime: datetime, optional
date of epoch for time origin in netcdf
clobber: bool, optional
If True, clobber any existing files and recreate. If False, use
the existing file definition
cdl: string, optional,
Use the specified CDL file as the definition for the new
netCDF file.
title: string, optional
netcdf attribute title
dims: int, optional
number of dimensions to use for lat/lon
Returns
-------
nc, netCDF4 object
"""
if cdl == None:
if dims == 1:
cdlfile = _cdl_dir + "zlevel_1d.cdl"
else:
cdlfile = _cdl_dir + "zlevel_2d.cdl"
else:
cdlfile = cdl
# Generate the Structure
dims, vars, attr = cdl_parser(cdlfile)
# Fill in the appropriate dimension values
dims["lat"] = lat
dims["lon"] = lon
dims["depth"] = depth
vars = _set_time_ref(vars, "time", reftime)
# Create the file
_nc = ncgen(filename, dims=dims, vars=vars, attr=attr, clobber=clobber,
title=title)
# Return the new file
return _nc
def create_frc_wind(filename,
eta_rho=10,
xi_rho=10,
s_rho=1,
cycle=None,
reftime=default_epoch,
clobber=False,
cdl=None,
title="My Winds"):
"""
Create a surface wind stress forcing file
Parameters
----------
filename : string
name and path of file to create
eta_rho: int, optional
number of rows in the eta direction
xi_rho: int, optional
number of columns in the xi direction
s_rho: int, optional
number of s-levels
cycle: int or None, optional
The number of days before cycling the forcing records
reftime: datetime, optional
date of epoch for time origin in netcdf
clobber: bool, optional
If True, clobber any existing files and recreate. If False, use
the existing file definition
cdl: string, optional,
Use the specified CDL file as the definition for the new
netCDF file.
title: string, optional
netcdf attribute title
Returns
-------
nc, netCDF4 object
"""
# Generate the Structure
dims, vars, attr = cdl_parser(_cdl_dir +
"frc_windstress.cdl" if cdl is None else cdl)
# Fill in the appropriate dimension values
dims = _set_grid_dimensions(dims, eta_rho, xi_rho, s_rho)
vars = _set_time_ref(vars, "sms_time", reftime, cycle)
# Create the file
_nc = ncgen(filename,
dims=dims,
vars=vars,
attr=attr,
clobber=clobber,
title=title)
# Return the new file
return _nc
def create_da_ray_obs(filename,
ray_datum=1,
provenance="None",
reftime=default_epoch,
clobber=False,
cdl=None,
title="My Observations"):
"""
Create an acoustic ray assimilation observations file
Parameters
----------
filename : string
name and path of file to create
ray_datum: int, optional
Number of rays to assimilate
provenance: string, optional
Description of the provenance values
reftime: datetime, optional
date of epoch for time origin in netcdf
clobber: bool, optional
If True, clobber any existing files and recreate. If False, use
the existing file definition
cdl: string, optional,
Use the specified CDL file as the definition for the new
netCDF file.
title: string, optional
netcdf attribute title
Returns
-------
nc, netCDF4 object
"""
# Generate the Structure
dims, vars, attr = cdl_parser(_cdl_dir +
"s4dvar_obs_ray.cdl" if cdl is None else cdl)
# Fill in the appropriate dimension values
dims["ray_datum"] = ray_datum
vars = _set_time_ref(vars, "obs_time", reftime)
# Set the provenance values in the global attributes
attr["obs_provenance"] = provenance
# Create the file
_nc = ncgen(filename,
dims=dims,
vars=vars,
attr=attr,
clobber=clobber,
title=title)
# Return the new file
return _nc
def create_zlevel_grid(filename, lat=10, lon=10, depth=1,
clobber=False, cdl=None,
title="Zlevel Grid", dims=2):
"""
Create z-level grid file
Parameters
----------
filename : string
name and path of file to create
lat: int, optional
number of latitudinal rows
lon: int, optional
number of longitudinal columns
depth: int, optional
number of z-levels
clobber: bool, optional
If True, clobber any existing files and recreate. If False, use
the existing file definition
cdl: string, optional,
Use the specified CDL file as the definition for the new
netCDF file.
title: string, optional
netcdf attribute title
dims: int, optional
number of dimensions to use for lat/lon
Returns
-------
nc, netCDF4 object
"""
if cdl == None:
if dims == 1:
cdlfile = _cdl_dir + "zlevel_1d_grid.cdl"
else:
cdlfile = _cdl_dir + "zlevel_2d_grid.cdl"
else:
cdlfile = cdl
# Generate the Structure
dims, vars, attr = cdl_parser(cdlfile)
# Fill in the appropriate dimension values
dims["lat"] = lat
dims["lon"] = lon
dims["depth"] = depth
# Create the file
_nc = ncgen(filename, dims=dims, vars=vars, attr=attr, clobber=clobber,
title=title)
# Return the new file
return _nc
def create_grid(filename,
eta_rho=10,
xi_rho=10,
s_rho=1,
clobber=False,
cdl=None,
title="My Grid"):
"""
Create a new, blank grid file
Parameters
----------
filename : string
name and path of file to create
eta_rho: int, optional
number of rows in the eta direction
xi_rho: int, optional
number of columns in the xi direction
s_rho: int, optional
number of s-levels
clobber: bool, optional
If True, clobber any existing files and recreate. If False, use
the existing file definition
cdl: string, optional,
Use the specified CDL file as the definition for the new
netCDF file.
title: string, optional
netcdf attribute title
Returns
-------
nc, netCDF4 object
"""
# Generate the Structure
dims, vars, attr = cdl_parser(_cdl_dir +
"roms_grid.cdl" if cdl is None else cdl)
# Fill in the appropriate dimension values
dims = _set_grid_dimensions(dims, eta_rho, xi_rho, s_rho)
print(dims)
# Create the grid file
_nc = ncgen(filename,
dims=dims,
vars=vars,
attr=attr,
clobber=clobber,
title=title)
# Return the new file
return _nc
def create_frc_flux(filename, eta_rho=10, xi_rho=10, ntimes=1,
cycle=None, reftime=default_epoch, clobber=False,
cdl=None, title="My Flux"):
"""
Create a surface flux forcing file
Parameters
----------
filename : string
name and path of file to create
eta_rho: int, optional
number of rows in the eta direction
xi_rho: int, optional
number of columns in the xi direction
s_rho: int, optional
number of s-levels
ntimes: int, optional
number of time records (climatology files do not have unlimited
dimension)
cycle: int or None, optional
The number of days before cycling the forcing records
reftime: datetime, optional
date of epoch for time origin in netcdf
clobber: bool, optional
If True, clobber any existing files and recreate. If False, use
the existing file definition
cdl: string, optional,
Use the specified CDL file as the definition for the new
netCDF file.
title: string, optional
netcdf attribute title
Returns
-------
nc, netCDF4 object
"""
# Generate the Structure
dims, vars, attr = cdl_parser(
_cdl_dir + "frc_fluxclm.cdl" if cdl is None else cdl)
# Fill in the appropriate dimension values
dims = _set_grid_dimensions(dims, eta_rho, xi_rho, 1)
times = ("srf_time", "shf_time", "swf_time", "sss_time")
for n in times:
dims[n] = ntimes
vars = _set_time_ref(vars, times, reftime)
# Create the file
_nc = ncgen(filename, dims=dims, vars=vars, attr=attr, clobber=clobber,
title=title)
# Return the new file
return _nc
def create_tide(filename,
eta_rho=10,
xi_rho=10,
s_rho=1,
ntides=1,
reftime=default_epoch,
clobber=False,
title="My Tides"):
"""
Create a barotropic tide forcing file
Parameters
----------
filename : string
name and path of file to create
eta_rho: int, optional
number of rows in the eta direction
xi_rho: int, optional
number of columns in the xi direction
s_rho: int, optional
number of s-levels
ntides: int, optional
number of tidal frequencies to force with
reftime: datetime, optional
date of epoch for time origin in netcdf
clobber: bool, optional
If True, clobber any existing files and recreate. If False, use
the existing file definition
title: string, optional
netcdf attribute title
Returns
-------
nc, netCDF4 object
"""
# Generate the Structure
dims, vars, attr = cdl_parser(_cdl_dir + "frc_tides.cdl")
# Fill in the appropriate dimension values
dims = _set_grid_dimensions(dims, eta_rho, xi_rho, s_rho)
dims["tide_period"] = ntides
# Create the file
_nc = ncgen(filename,
dims=dims,
vars=vars,
attr=attr,
clobber=clobber,
title=title)
# Return the new file
return _nc
def create_psource(filename,
nriver=1,
s_rho=5,
reftime=default_epoch,
clobber=False,
cdl=None,
title="My River"):
"""
Create a new, blank point source file
Parameters
----------
filename : string
name and path of file to create
nriver : int, optional
number of rivers to put in file
s_rho: int, optional
number of s-levels
reftime: datetime, optional
date of epoch for time origin in netcdf
clobber: bool, optional
If True, clobber any existing files and recreate. If False, use
the existing file definition
cdl: string, optional,
Use the specified CDL file as the definition for the new
netCDF file.
title: string, optional
netcdf attribute title
Returns
-------
nc, netCDF4 object
"""
# Generate the Structure
dims, vars, attr = cdl_parser(_cdl_dir +
"frc_rivers.cdl" if cdl is None else cdl)
# Fill in the appropriate river values
dims["river"] = nriver
dims["s_rho"] = s_rho
vars = _set_time_ref(vars, "river_time", reftime)
# Create the river file
_nc = ncgen(filename,
dims=dims,
vars=vars,
attr=attr,
clobber=clobber,
title=title)
# Return the new file
return _nc
def create_da_obs(filename, state_variable=20, survey=1, provenance=None,
clobber=False, cdl=None, title="My Observations"):
"""
Create an assimilation observations file
Parameters
----------
filename : string
name and path of file to create
survey: int, optional
number of surveys in the file
state_variable: int, optional
number of state variables in the observations
provenance: string, optional
Description of the provenance values
reftime: datetime, optional
date of epoch for time origin in netcdf
clobber: bool, optional
If True, clobber any existing files and recreate. If False, use
the existing file definition
cdl: string, optional,
Use the specified CDL file as the definition for the new
netCDF file.
title: string, optional
netcdf attribute title
Returns
-------
nc, netCDF4 object
"""
# Generate the Structure
dims, vars, attr = cdl_parser(
_cdl_dir + "s4dvar_obs.cdl" if cdl is None else cdl)
# Fill in the appropriate dimension values
dims["survey"] = survey
dims["state_variable"] = state_variable
# Set the provenance values in the global attributes
if provenance is not None:
attr["obs_provenance"] = str(provenance)
# Create the file
_nc = ncgen(filename, dims=dims, vars=vars, attr=attr, clobber=clobber,
title=title, format="NETCDF3_64BIT")
# Return the new file
return _nc
def create_frc_flux(filename, eta_rho=10, xi_rho=10, ntimes=1,
cycle=None, reftime=default_epoch, clobber=False,
title="My Flux"):
"""
Create a surface flux forcing file
Parameters
----------
filename : string
name and path of file to create
eta_rho: int, optional
number of rows in the eta direction
xi_rho: int, optional
number of columns in the xi direction
s_rho: int, optional
number of s-levels
ntimes: int, optional
number of time records (climatology files do not have unlimited
dimension)
cycle: int or None, optional
The number of days before cycling the forcing records
reftime: datetime, optional
date of epoch for time origin in netcdf
clobber: bool, optional
If True, clobber any existing files and recreate. If False, use
the existing file definition
title: string, optional
netcdf attribute title
Returns
-------
nc, netCDF4 object
"""
# Generate the Structure
dims, vars, attr = cdl_parser(_cdl_dir + "frc_fluxclm.cdl")
# Fill in the appropriate dimension values
dims = _set_grid_dimensions(dims, eta_rho, xi_rho, 1)
times = ("srf_time", "shf_time", "swf_time", "sss_time")
for n in times:
dims[n] = ntimes
vars = _set_time_ref(vars, times, reftime)
# Create the file
_nc = ncgen(filename, dims=dims, vars=vars, attr=attr, clobber=clobber,
title=title)
# Return the new file
return _nc
def create_da_bry_std(filename, eta_rho=10, xi_rho=10, s_rho=1, bry=4,
reftime=default_epoch, clobber=False, cdl=None,
title="My BRY STD"):
"""
Create a boundaries standard deviation file
Parameters
----------
filename : string
name and path of file to create
eta_rho: int, optional
number of rows in the eta direction
xi_rho: int, optional
number of columns in the xi direction
s_rho: int, optional
number of s-levels
bry: int, optional
number of open boundaries to specify
reftime: datetime, optional
date of epoch for time origin in netcdf
clobber: bool, optional
If True, clobber any existing files and recreate. If False, use
the existing file definition
cdl: string, optional,
Use the specified CDL file as the definition for the new
netCDF file.
title: string, optional
netcdf attribute title
Returns
-------
nc, netCDF4 object
"""
# Generate the Structure
dims, vars, attr = cdl_parser(
_cdl_dir + "s4dvar_std_b.cdl" if cdl is None else cdl)
# Fill in the appropriate dimension values
dims = _set_grid_dimensions(dims, eta_rho, xi_rho, s_rho)
dims["IorJ"] = max(eta_rho, xi_rho)
dims["boundary"] = bry
vars = _set_time_ref(vars, "ocean_time", reftime)
# Create the file
_nc = ncgen(filename, dims=dims, vars=vars, attr=attr, clobber=clobber,
title=title)
# Return the new file
return _nc
def create_frc_direct(filename, eta_rho=10, xi_rho=10,
reftime=default_epoch, clobber=False, cdl=None,
title="My Forcing"):
"""
Create a direct surface forcing file
Parameters
----------
filename : string
name and path of file to create
eta_rho: int, optional
number of rows in the eta direction
xi_rho: int, optional
number of columns in the xi direction
reftime: datetime, optional
date of epoch for time origin in netcdf
clobber: bool, optional
If True, clobber any existing files and recreate. If False, use
the existing file definition
cdl: string, optional,
Use the specified CDL file as the definition for the new
netCDF file.
title: string, optional
netcdf attribute title
Returns
-------
nc, netCDF4 object
"""
# Generate the Structure
dims, vars, attr = cdl_parser(
_cdl_dir + "frc_direct.cdl" if cdl is None else cdl)
# Fill in the appropriate dimension values
dims = {'y_rho': eta_rho,
'y_u': eta_rho,
'y_v': eta_rho - 1,
'x_rho': xi_rho,
'x_u': xi_rho - 1,
'x_v': xi_rho,
'frc_time': 0}
vars = _set_time_ref(vars, 'frc_time', reftime)
# Create the file
_nc = ncgen(filename, dims=dims, vars=vars, attr=attr, clobber=clobber,
title=title)
# Return the new file
return _nc
def create_da_ray_obs(filename, ray_datum=1, provenance="None",
reftime=default_epoch, clobber=False,
cdl=None, title="My Observations"):
"""
Create an acoustic ray assimilation observations file
Parameters
----------
filename : string
name and path of file to create
ray_datum: int, optional
Number of rays to assimilate
provenance: string, optional
Description of the provenance values
reftime: datetime, optional
date of epoch for time origin in netcdf
clobber: bool, optional
If True, clobber any existing files and recreate. If False, use
the existing file definition
cdl: string, optional,
Use the specified CDL file as the definition for the new
netCDF file.
title: string, optional
netcdf attribute title
Returns
-------
nc, netCDF4 object
"""
# Generate the Structure
dims, vars, attr = cdl_parser(
_cdl_dir + "s4dvar_obs_ray.cdl" if cdl is None else cdl)
# Fill in the appropriate dimension values
dims["ray_datum"] = ray_datum
vars = _set_time_ref(vars, "obs_time", reftime)
# Set the provenance values in the global attributes
attr["obs_provenance"] = provenance
# Create the file
_nc = ncgen(filename, dims=dims, vars=vars, attr=attr, clobber=clobber,
title=title)
# Return the new file
return _nc
def create_frc_qcorr(filename, eta_rho=10, xi_rho=10, s_rho=1, cycle=None,
reftime=default_epoch, clobber=False, cdl=None,
title="My Qcorrection"):
"""
Create a Q Correction forcing file
Parameters
----------
filename : string
name and path of file to create
eta_rho: int, optional
number of rows in the eta direction
xi_rho: int, optional
number of columns in the xi direction
s_rho: int, optional
number of s-levels
cycle: int or None, optional
The number of days before cycling the forcing records
reftime: datetime, optional
date of epoch for time origin in netcdf
clobber: bool, optional
If True, clobber any existing files and recreate. If False, use
the existing file definition
cdl: string, optional,
Use the specified CDL file as the definition for the new
netCDF file.
title: string, optional
netcdf attribute title
Returns
-------
nc, netCDF4 object
"""
# Generate the Structure
dims, vars, attr = cdl_parser(
_cdl_dir + "frc_qcorr.cdl" if cdl is None else cdl)
# Fill in the appropriate dimension values
dims = _set_grid_dimensions(dims, eta_rho, xi_rho, s_rho)
vars = _set_time_ref(vars, "sst_time", reftime, cycle)
# Create the file
_nc = ncgen(filename, dims=dims, vars=vars, attr=attr, clobber=clobber,
title=title)
# Return the new file
return _nc
def create_grid(filename, eta_rho=10, xi_rho=10, s_rho=1, clobber=False,
cdl=None, title="My Grid"):
"""
Create a new, blank grid file
Parameters
----------
filename : string
name and path of file to create
eta_rho: int, optional
number of rows in the eta direction
xi_rho: int, optional
number of columns in the xi direction
s_rho: int, optional
number of s-levels
clobber: bool, optional
If True, clobber any existing files and recreate. If False, use
the existing file definition
cdl: string, optional,
Use the specified CDL file as the definition for the new
netCDF file.
title: string, optional
netcdf attribute title
Returns
-------
nc, netCDF4 object
"""
# Generate the Structure
dims, vars, attr = cdl_parser(
_cdl_dir + "roms_grid.cdl" if cdl is None else cdl)
# Fill in the appropriate dimension values
dims = _set_grid_dimensions(dims, eta_rho, xi_rho, s_rho)
print(dims)
# Create the grid file
_nc = ncgen(filename, dims=dims, vars=vars, attr=attr, clobber=clobber,
title=title)
# Return the new file
return _nc
def create_tide(filename, eta_rho=10, xi_rho=10, s_rho=1, ntides=1,
reftime=default_epoch, clobber=False,
title="My Tides"):
"""
Create a barotropic tide forcing file
Parameters
----------
filename : string
name and path of file to create
eta_rho: int, optional
number of rows in the eta direction
xi_rho: int, optional
number of columns in the xi direction
s_rho: int, optional
number of s-levels
ntides: int, optional
number of tidal frequencies to force with
reftime: datetime, optional
date of epoch for time origin in netcdf
clobber: bool, optional
If True, clobber any existing files and recreate. If False, use
the existing file definition
title: string, optional
netcdf attribute title
Returns
-------
nc, netCDF4 object
"""
# Generate the Structure
dims, vars, attr = cdl_parser(_cdl_dir + "frc_tides.cdl")
# Fill in the appropriate dimension values
dims = _set_grid_dimensions(dims, eta_rho, xi_rho, s_rho)
dims["tide_period"] = ntides
# Create the file
_nc = ncgen(filename, dims=dims, vars=vars, attr=attr, clobber=clobber,
title=title)
# Return the new file
return _nc
def create_psource(filename, nriver=1, s_rho=5,
reftime=default_epoch, clobber=False, cdl=None, title="My River"):
"""
Create a new, blank point source file
Parameters
----------
filename : string
name and path of file to create
nriver : int, optional
number of rivers to put in file
s_rho: int, optional
number of s-levels
reftime: datetime, optional
date of epoch for time origin in netcdf
clobber: bool, optional
If True, clobber any existing files and recreate. If False, use
the existing file definition
cdl: string, optional,
Use the specified CDL file as the definition for the new
netCDF file.
title: string, optional
netcdf attribute title
Returns
-------
nc, netCDF4 object
"""
# Generate the Structure
dims, vars, attr = cdl_parser(
_cdl_dir + "frc_rivers.cdl" if cdl is None else cdl)
# Fill in the appropriate river values
dims["river"] = nriver
dims["s_rho"] = s_rho
vars = _set_time_ref(vars, "river_time", reftime)
# Create the river file
_nc = ncgen(filename, dims=dims, vars=vars, attr=attr, clobber=clobber,
title=title)
# Return the new file
return _nc
def _create_generic_file(filename, cdl, eta_rho, xi_rho, s_rho,
reftime=None, clobber=False, title="ROMS"):
"""
internal method: Generic file creator that uses ocean_time
"""
# Generate the Structure
dims, vars, attr = cdl_parser(_cdl_dir + cdl)
# Fill in the appropriate dimension values
dims = _set_grid_dimensions(dims, eta_rho, xi_rho, s_rho)
if reftime is not None:
vars = _set_time_ref(vars, "ocean_time", reftime)
# Create the file
_nc = ncgen(filename, dims=dims, vars=vars, attr=attr, clobber=clobber,
title=title)
# Return the new file
return _nc
def create_da_frc_std(filename, eta_rho=10, xi_rho=10, s_rho=1,
reftime=default_epoch, clobber=False,
title="My FRC STD"):
"""
Create a forcing standard deviation file
Parameters
----------
filename : string
name and path of file to create
eta_rho: int, optional
number of rows in the eta direction
xi_rho: int, optional
number of columns in the xi direction
s_rho: int, optional
number of s-levels
reftime: datetime, optional
date of epoch for time origin in netcdf
clobber: bool, optional
If True, clobber any existing files and recreate. If False, use
the existing file definition
title: string, optional
netcdf attribute title
Returns
-------
nc, netCDF4 object
"""
# Generate the Structure
dims, vars, attr = cdl_parser(_cdl_dir + "s4dvar_std_f.cdl")
# Fill in the appropriate dimension values
dims = _set_grid_dimensions(dims, eta_rho, xi_rho, s_rho)
vars = _set_time_ref(vars, "ocean_time", reftime)
# Create the file
_nc = ncgen(filename, dims=dims, vars=vars, attr=attr, clobber=clobber,
title=title)
# Return the new file
return _nc
def create_da_model_std(filename, eta_rho=10, xi_rho=10, s_rho=1,
reftime=default_epoch, clobber=False,
title="My Model STD"):
"""
Create an time varying model standard deviation file
Parameters
----------
filename : string
name and path of file to create
eta_rho: int, optional
number of rows in the eta direction
xi_rho: int, optional
number of columns in the xi direction
s_rho: int, optional
number of s-levels
reftime: datetime, optional
date of epoch for time origin in netcdf
clobber: bool, optional
If True, clobber any existing files and recreate. If False, use
the existing file definition
title: string, optional
netcdf attribute title
Returns
-------
nc, netCDF4 object
"""
# Generate the Structure
dims, vars, attr = cdl_parser(_cdl_dir + "s4dvar_std_m.cdl")
# Fill in the appropriate dimension values
dims = _set_grid_dimensions(dims, eta_rho, xi_rho, s_rho)
vars = _set_time_ref(vars, "ocean_time", reftime)
# Create the file
_nc = ncgen(filename, dims=dims, vars=vars, attr=attr, clobber=clobber,
title=title)
# Return the new file
return _nc
def create_frc_bulk(filename, lat=10, lon=10,
reftime=default_epoch, clobber=False,
title="My Forcing"):
"""
Create a bulk flux forcing file
Parameters
----------
filename : string
name and path of file to create
eta_rho: int, optional
number of rows in the eta direction
xi_rho: int, optional
number of columns in the xi direction
reftime: datetime, optional
date of epoch for time origin in netcdf
clobber: bool, optional
If True, clobber any existing files and recreate. If False, use
the existing file definition
title: string, optional
netcdf attribute title
Returns
-------
nc, netCDF4 object
"""
# Generate the Structure
dims, vars, attr = cdl_parser(_cdl_dir + "frc_bulk.cdl")
# Fill in the appropriate dimension values
dims["lat"] = lat
dims["lon"] = lon
vars = _set_time_ref(vars, "frc_time", reftime)
# Create the file
_nc = ncgen(filename, dims=dims, vars=vars, attr=attr, clobber=clobber,
title=title)
# Return the new file
return _nc
def create_frc_bulk(filename, lat=10, lon=10,
reftime=default_epoch, clobber=False,
title="My Forcing"):
"""
Create a bulk flux forcing file
Parameters
----------
filename : string
name and path of file to create
eta_rho: int, optional
number of rows in the eta direction
xi_rho: int, optional
number of columns in the xi direction
reftime: datetime, optional
date of epoch for time origin in netcdf
clobber: bool, optional
If True, clobber any existing files and recreate. If False, use
the existing file definition
title: string, optional
netcdf attribute title
Returns
-------
nc, netCDF4 object
"""
# Generate the Structure
dims, vars, attr = cdl_parser(_cdl_dir + "frc_bulk.cdl")
# Fill in the appropriate dimension values
dims["lat"] = lat
dims["lon"] = lon
vars = _set_time_ref(vars, "time", reftime)
# Create the file
_nc = ncgen(filename, dims=dims, vars=vars, attr=attr, clobber=clobber,
title=title)
# Return the new file
return _nc
def create_nudge_coef(filename, eta_rho=10, xi_rho=10, s_rho=1, clobber=False, title="My Nudging"):
"""
Create a nudging coefficients file
Parameters
----------
filename : string
name and path of file to create
eta_rho: int, optional
number of rows in the eta direction
xi_rho: int, optional
number of columns in the xi direction
s_rho: int, optional
number of s-levels
clobber: bool, optional
If True, clobber any existing files and recreate. If False, use
the existing file definition
title: string, optional
netcdf attribute title
Returns
-------
nc, netCDF4 object
"""
# Generate the Structure
dims, vars, attr = cdl_parser(_cdl_dir + "nudge_coef.cdl")
# Fill in the appropriate dimension values
dims = _set_grid_dimensions(dims, eta_rho, xi_rho, s_rho)
# Create the file
_nc = ncgen(filename, dims=dims, vars=vars, attr=attr, clobber=clobber,
title=title)
# Return the new file
return _nc