def main(par): verb = par.bool('verb', False) dryrun = par.bool('dryrun', False) # sfbyte arguments: bytepars = {} for key in ['gainpanel', 'pclip', 'clip']: bytepars[key] = par.string(key, None) # sfgrey3 arguments: color = par.string('color', None) lbl = int(100000000 * random.random()) suffix = '.' + str(lbl) + ivlad.ext prefix = sys.argv[0].rstrip('.py') + '.' tmp_filenm = prefix + 'inp' + suffix bar_filenm = prefix + 'bar' + suffix # Redirect the input if not dryrun: tmp_file = open(tmp_filenm, 'w') tmp_file.write(sys.stdin.read()) tmp_file.close() sf._set_xmode('l') cmd_list = [ '# Redirect input to ' + tmp_filenm, sf.bar(tmp_filenm, bar_filenm) ] ivlad.exe(cmd_list, verb, dryrun) if dryrun: cmd = '<' + tmp_filenm + ' sfbyte | sfgrey3 scalebar=y bar=' cmd += bar_filenm + ' >stdout' ivlad.msg(cmd, verb) else: p1 = subprocess.Popen(['sfbyte'], stdin=subprocess.PIPE, stdout=subprocess.PIPE) tmp_file = open(tmp_filenm, 'r') p1.stdin.write(tmp_file.read()) p2 = subprocess.Popen(['sfgrey3', 'scalebar=y', 'bar=' + bar_filenm], stdin=p1.stdout, stdout=subprocess.PIPE) sys.stdout.write(p2.stdout.read()) p1.stdin.close() tmp_file.close() p2.stdout.close() cmd = sf.rm([tmp_filenm, bar_filenm]) ivlad.exe(cmd, verb, dryrun) return ivlad.unix_success
def main(par): verb = par.bool('verb' , False) dryrun = par.bool('dryrun', False) # sfbyte arguments: bytepars = {} for key in ['gainpanel', 'pclip', 'clip']: bytepars[key] = par.string(key, None) # sfgrey3 arguments: color = par.string('color', None) lbl = int(100000000*random.random()) suffix = '.' + str(lbl) + ivlad.ext prefix = sys.argv[0].rstrip('.py') + '.' tmp_filenm = prefix + 'inp' + suffix bar_filenm = prefix + 'bar' + suffix # Redirect the input if not dryrun: tmp_file = open(tmp_filenm, 'w') tmp_file.write(sys.stdin.read()) tmp_file.close() sf._set_xmode('l') cmd_list = ['# Redirect input to ' + tmp_filenm, sf.bar(tmp_filenm, bar_filenm)] ivlad.exe(cmd_list, verb, dryrun) if dryrun: cmd = '<' + tmp_filenm + ' sfbyte | sfgrey3 scalebar=y bar=' cmd+= bar_filenm + ' >stdout' ivlad.msg(cmd, verb) else: p1 = subprocess.Popen(['sfbyte'], stdin=subprocess.PIPE, stdout=subprocess.PIPE) tmp_file = open(tmp_filenm, 'r') p1.stdin.write(tmp_file.read()) p2 = subprocess.Popen(['sfgrey3', 'scalebar=y', 'bar='+bar_filenm], stdin=p1.stdout, stdout=subprocess.PIPE) sys.stdout.write(p2.stdout.read()) p1.stdin.close() tmp_file.close() p2.stdout.close() cmd = sf.rm([tmp_filenm, bar_filenm]) ivlad.exe(cmd, verb, dryrun) return ivlad.unix_success
def main(par): verb = par.bool('verb', False) # Display headers and binaries being deleted mydir = par.string('dir') # Directory with files recursive = par.bool('rec', False) # Whether to go down recursively # Clean up headers with existing binaries valid_files_list = [] if recursive: for root, dirs, files in mydir: valid_files_list += \ ivlad.list_valid_rsf_files(root, files, chk4nan) else: files = [x for x in os.listdir(mydir) if os.path.isfile(x)] valid_files_list += \ ivlad.list_valid_rsf_files(mydir, files, chk4nan=False) for f in valid_files_list: ivlad.msg(f + ': ' + ivlad.getout('sfin', ['info=n', f]), verb) sf.rm(f, verb) # Clean up headers with no binaries if recursive: hdr_str = ivlad.getout('find', [mydir, '-type', 'f', '-name', '"*.rsf"']) hdr_list = hdr_str.split('\n') else: hdr_list = [ x for x in glob.glob(os.path.join(mydir, '*.rsf')) if os.path.isfile(x) ] for f in hdr_list: ivlad.msg(f) os.remove(f) return ivlad.unix_success
def main(par): verb = par.bool('verb', False) # Display headers and binaries being deleted mydir = par.string('dir') # Directory with files recursive = par.bool('rec', False) # Whether to go down recursively # Clean up headers with existing binaries valid_files_list = [] if recursive: for root, dirs, files in mydir: valid_files_list += \ ivlad.list_valid_rsf_files(root, files, chk4nan) else: files = filter(lambda x:os.path.isfile(x),os.listdir(mydir)) valid_files_list += \ ivlad.list_valid_rsf_files(mydir, files, chk4nan=False) for f in valid_files_list: ivlad.msg(f + ': ' + ivlad.getout('sfin',['info=n',f]), verb) sf.rm(f, verb) # Clean up headers with no binaries if recursive: hdr_str = ivlad.getout('find',[mydir, '-type', 'f', '-name', '"*.rsf"']) hdr_list = hdr_str.split('\n') else: hdr_list = filter(lambda x:os.path.isfile(x), glob.glob(os.path.join(mydir,'*.rsf'))) for f in hdr_list: ivlad.msg(f) os.remove(f) return ivlad.unix_success
def main(par): inp = par.string('inp') # input file out = par.string('out') # output file verb = par.bool('verb', False) # if y, print system commands, outputs ivlad.chk_file_dims(inp, 2) n1 = ivlad.getout('sfget',['parform=n','n1'], inp, verb) n2 = ivlad.getout('sfget',['parform=n','n2'], inp, verb) n1 = int(n1) n2 = int(n2) h = par.int('h', 768) # output height w = par.int('w', 1024) # output width has_h = par.string('h') has_w = par.string('w') if has_h and has_w: # both w and h were read. Check for sanity: ivlad.chk_param_limit(w, 'w') ivlad.chk_param_limit(h, 'h') if (h,w) == (n1,n2): ivlad.msg('Change h or w if you want out != inp') sf.cp(inp, out, verb) return ivlad.unix_success # Transform h and w to pixels, if they are not # No default value for par.string -- Quirk of rsf, replicated in rsfbak unit = par.string('unit', 'px') # unit of h and w. Can be: px, mm, cm, in ivlad.chk_par_in_list(unit,['mm','cm','in','px']) if unit != 'px': ppi = par.int('ppi') # outp. resolution (px/in). Necessary when unit!=px ivlad.chk_param_limit(ppi, 'ppi') # Transform w and h to px if unit == 'in': scale = 1 elif unit == 'mm': scale = 254 elif unit == 'cm': scale = 25.4 w *= ppi / float(scale) h *= ppi / float(scale) # Don't worry, we'll convert to int after prar block del scale # Now h and w are in pixels # If prar=y, then h and/or w define a bounding box. # Find the dimensions of the image inside this box prar = par.bool('prar', True) # if y, PReserve Aspect Ratio of input if prar: # preserve aspect ratio if has_h and not has_w: w = n2 * float(h) / n1 elif has_w and not has_h: h = n1 * float(w) / n2 else: # Full bounding box specified hscale = float(h) / n1 wscale = float(w) / n2 if hscale < wscale: w = n2 * hscale else: h = n1 * wscale h = int(h) w = int(w) assert h > 1 assert w > 1 h = ivlad.valswitch(h, n1, None) w = ivlad.valswitch(w, n2, None) tmp = tempfile.mktemp(dir=rsf.path.datapath()) # Interpolation and, if needed, bandpass if h != None: d1 = ivlad.getout('sfget', ['parform=n','d1'], inp, verb) d1 = float(d1) * (n1-1)/float(h-1) if h < n1: ready_for_remap_1 = tmp + '1' sf.bandpass(inp, ready_for_remap_1, fhi=0.5/d1, verb=verb) rem2del_junk1 = True else: ready_for_remap_1 = inp rem2del_junk1 = False if w: out_remap1 = tmp + '2' rem2del_junk2 = True else: out_remap1 = out rem2del_junk2 = False sf.remap1(ready_for_remap_1, out_remap1, n1=h, d1=d1, verb=verb) if rem2del_junk1: sf.rm(ready_for_remap_1, verb) else: # no action on axis 1 out_remap1 = inp rem2del_junk2 = False if w != None: d2 = ivlad.getout('sfget', ['parform=n','d2'], inp, verb) d2 = float(d2) * (n2-1)/float(w-1) out_transp1 = tmp + '3' sf.transp(out_remap1, out_transp1, verb=verb) if rem2del_junk2: sf.rm(out_remap1, verb) if w < n2: ready_for_remap_2 = tmp + '4' sf.bandpass(out_transp1, ready_for_remap_2, fhi=0.5/d2, verb=verb) rem2del_junk4 = True else: ready_for_remap_2 = out_transp1 rem2del_junk4 = False ready_for_transp2 = tmp + '5' sf.remap1(ready_for_remap_2,ready_for_transp2,n1=w,d1=d2,verb=verb) sf.rm(out_transp1, verb) if rem2del_junk4: sf.rm(ready_for_remap_2, verb) sf.transp(ready_for_transp2, out, verb=verb) sf.rm(ready_for_transp2, verb) return ivlad.unix_success
def main(par): inp = par.string('inp') # input file out = par.string('out') # output file verb = par.bool('verb', False) # if y, print system commands, outputs ivlad.chk_file_dims(inp, 2) n1 = ivlad.getout('sfget', ['parform=n', 'n1'], inp, verb) n2 = ivlad.getout('sfget', ['parform=n', 'n2'], inp, verb) n1 = int(n1) n2 = int(n2) h = par.int('h', 768) # output height w = par.int('w', 1024) # output width has_h = par.string('h') has_w = par.string('w') if has_h and has_w: # both w and h were read. Check for sanity: ivlad.chk_param_limit(w, 'w') ivlad.chk_param_limit(h, 'h') if (h, w) == (n1, n2): ivlad.msg('Change h or w if you want out != inp') sf.cp(inp, out, verb) return ivlad.unix_success # Transform h and w to pixels, if they are not # No default value for par.string -- Quirk of rsf, replicated in rsfbak unit = par.string('unit', 'px') # unit of h and w. Can be: px, mm, cm, in ivlad.chk_par_in_list(unit, ['mm', 'cm', 'in', 'px']) if unit != 'px': ppi = par.int( 'ppi') # outp. resolution (px/in). Necessary when unit!=px ivlad.chk_param_limit(ppi, 'ppi') # Transform w and h to px if unit == 'in': scale = 1 elif unit == 'mm': scale = 254 elif unit == 'cm': scale = 25.4 w *= ppi / float(scale) h *= ppi / float(scale) # Don't worry, we'll convert to int after prar block del scale # Now h and w are in pixels # If prar=y, then h and/or w define a bounding box. # Find the dimensions of the image inside this box prar = par.bool('prar', True) # if y, PReserve Aspect Ratio of input if prar: # preserve aspect ratio if has_h and not has_w: w = n2 * float(h) / n1 elif has_w and not has_h: h = n1 * float(w) / n2 else: # Full bounding box specified hscale = float(h) / n1 wscale = float(w) / n2 if hscale < wscale: w = n2 * hscale else: h = n1 * wscale h = int(h) w = int(w) assert h > 1 assert w > 1 h = ivlad.valswitch(h, n1, None) w = ivlad.valswitch(w, n2, None) tmp = tempfile.mktemp(dir=rsf.path.datapath()) # Interpolation and, if needed, bandpass if h != None: d1 = ivlad.getout('sfget', ['parform=n', 'd1'], inp, verb) d1 = float(d1) * (n1 - 1) / float(h - 1) if h < n1: ready_for_remap_1 = tmp + '1' sf.bandpass(inp, ready_for_remap_1, fhi=0.5 / d1, verb=verb) rem2del_junk1 = True else: ready_for_remap_1 = inp rem2del_junk1 = False if w: out_remap1 = tmp + '2' rem2del_junk2 = True else: out_remap1 = out rem2del_junk2 = False sf.remap1(ready_for_remap_1, out_remap1, n1=h, d1=d1, verb=verb) if rem2del_junk1: sf.rm(ready_for_remap_1, verb) else: # no action on axis 1 out_remap1 = inp rem2del_junk2 = False if w != None: d2 = ivlad.getout('sfget', ['parform=n', 'd2'], inp, verb) d2 = float(d2) * (n2 - 1) / float(w - 1) out_transp1 = tmp + '3' sf.transp(out_remap1, out_transp1, verb=verb) if rem2del_junk2: sf.rm(out_remap1, verb) if w < n2: ready_for_remap_2 = tmp + '4' sf.bandpass(out_transp1, ready_for_remap_2, fhi=0.5 / d2, verb=verb) rem2del_junk4 = True else: ready_for_remap_2 = out_transp1 rem2del_junk4 = False ready_for_transp2 = tmp + '5' sf.remap1(ready_for_remap_2, ready_for_transp2, n1=w, d1=d2, verb=verb) sf.rm(out_transp1, verb) if rem2del_junk4: sf.rm(ready_for_remap_2, verb) sf.transp(ready_for_transp2, out, verb=verb) sf.rm(ready_for_transp2, verb) return ivlad.unix_success