def __init__(self, parent=None, title="Set constraints"):
super(ConstraintsPage, self).__init__(parent)
self.setTitle(title)
self.setToolTip("Disable 'Set constraints' to remove all " +
"constraints on all fit parameters")
self.setCheckable(True)
layout = qt.QVBoxLayout(self)
self.setLayout(layout)
self.positiveHeightCB = qt.QCheckBox("Force positive height/area", self)
self.positiveHeightCB.setToolTip("Fit must find positive peaks")
layout.addWidget(self.positiveHeightCB)
self.positionInIntervalCB = qt.QCheckBox("Force position in interval", self)
self.positionInIntervalCB.setToolTip(
"Fit must position peak within X limits")
layout.addWidget(self.positionInIntervalCB)
self.positiveFwhmCB = qt.QCheckBox("Force positive FWHM", self)
self.positiveFwhmCB.setToolTip("Fit must find a positive FWHM")
layout.addWidget(self.positiveFwhmCB)
self.sameFwhmCB = qt.QCheckBox("Force same FWHM for all peaks", self)
self.sameFwhmCB.setToolTip("Fit must find same FWHM for all peaks")
layout.addWidget(self.sameFwhmCB)
self.quotedEtaCB = qt.QCheckBox("Force Eta between 0 and 1", self)
self.quotedEtaCB.setToolTip(
"Fit must find Eta between 0 and 1 for pseudo-Voigt function")
layout.addWidget(self.quotedEtaCB)
layout.addStretch()
self.setDefault()
def setupUi(self):
# form layout for grid scan inputs
layout = qt.QFormLayout()
self.noChangeBox = qt.QRadioButton()
layout.addRow(qt.QLabel("Export flat list of points:"), self.noChangeBox)
self.reshapeBox = qt.QRadioButton()
self.reshapeBox.setChecked(True)
layout.addRow(qt.QLabel("Try reshaping the data:"), self.reshapeBox)
self.shapeBox = qt.QLineEdit('auto')
layout.addRow(qt.QLabel(" shape:"), self.shapeBox)
self.resampleBox = qt.QRadioButton()
layout.addRow(qt.QLabel("Resample the data on a grid:"), self.resampleBox)
self.oversamplingBox = qt.QSpinBox()
self.oversamplingBox.setValue(1)
layout.addRow(qt.QLabel(" oversampling relative to typical step size:"), self.oversamplingBox)
self.equalBox = qt.QCheckBox()
self.equalBox.setChecked(True)
layout.addRow(qt.QLabel(" equal horizontal and vertical steps"), self.equalBox)
self.formGroupBox = qt.QGroupBox("PyMCA needs data layed out on a regular grid.")
self.formGroupBox.setLayout(layout)
# ok/cancel buttons
buttonBox = qt.QDialogButtonBox(qt.QDialogButtonBox.Ok | qt.QDialogButtonBox.Cancel)
buttonBox.accepted.connect(self.accept)
buttonBox.rejected.connect(self.reject)
# put everything together
mainLayout = qt.QVBoxLayout()
mainLayout.addWidget(self.formGroupBox)
mainLayout.addWidget(buttonBox)
self.setLayout(mainLayout)
self.setWindowTitle("Export for PyMCA...")
def fillSplitterFiles(self):
splitterInner = qt.QWidget(self.splitterFiles)
labelFilter = qt.QLabel('file filter')
self.editFileFilter = qt.QLineEdit()
self.editFileFilter.returnPressed.connect(self.setFileFilter)
if hasattr(self.node, 'fileNameFilters'):
self.editFileFilter.setText(', '.join(self.node.fileNameFilters))
self.files = FileTreeView(self.node)
# self.files.doubleClicked.connect(self.loadFiles)
self.files.model().directoryLoaded.connect(self._directoryIsLoaded)
self.filesAutoAddCB = qt.QCheckBox("auto append fresh file TODO", self)
fileFilterLayout = qt.QHBoxLayout()
fileFilterLayout.addWidget(labelFilter)
fileFilterLayout.addWidget(self.editFileFilter, 1)
layout = qt.QVBoxLayout()
layout.setContentsMargins(2, 0, 0, 0)
layout.addLayout(fileFilterLayout)
layout.addWidget(self.files)
layout.addWidget(self.filesAutoAddCB)
splitterInner.setLayout(layout)
self.columnFormat = ColumnFormatWidget(self.splitterFiles, self.node)
self.splitterFiles.setStretchFactor(0, 1) # don't remove
self.splitterFiles.setStretchFactor(1, 0)
def __init__(self, parent=None, node=None):
super(CombineSpectraWidget, self).__init__(parent, node)
combineDataGroup = self.makeCombineDataGroup()
layout = qt.QVBoxLayout()
layout.setContentsMargins(4, 2, 2, 0)
self.stopHereCB = qt.QCheckBox("stop data propagation here (TODO)")
layout.addWidget(self.stopHereCB)
layout.addWidget(combineDataGroup)
layout.addStretch()
self.setLayout(layout)
self.combineTypeChanged(0)
self.combineStopCBChanged(0)
def makeCombineDataGroup(self):
self.combineType = qt.QComboBox()
self.combineType.addItems(csp.combineNames)
self.combineType.currentIndexChanged.connect(self.combineTypeChanged)
self.combineNLabel = qt.QLabel("N=")
self.combineN = qt.QSpinBox()
self.combineN.setMinimum(1)
self.combineStopCB = qt.QCheckBox(
u"stop propagation of\ncontributing data at:")
self.combineStopCB.stateChanged.connect(self.combineStopCBChanged)
self.combineStop = qt.QComboBox()
self.combineStop.addItems(csi.nodes.keys())
self.combineMoveToGroupCB = qt.QCheckBox(
u"move selected data to a new group")
self.combineDo = qt.QPushButton("Combine")
self.combineDo.clicked.connect(self.createCombined)
# layout = qt.QVBoxLayout()
# layout.addWidget(self.combineType)
# layout.addWidget(self.combineStopCB)
# layout.addWidget(self.combineStop)
# layout.addWidget(self.combineDo)
# layout.addStretch()
layout = qt.QGridLayout()
layout.setContentsMargins(2, 0, 2, 2)
layout.addWidget(self.combineType, 0, 0)
layoutN = qt.QHBoxLayout()
layoutN.addStretch()
layoutN.addWidget(self.combineNLabel)
layoutN.addWidget(self.combineN)
layout.addLayout(layoutN, 0, 1)
layout.addWidget(self.combineStopCB, 1, 0)
layout.addWidget(self.combineStop, 1, 1)
layout.addWidget(self.combineMoveToGroupCB, 2, 0, 1, 2)
layout.addWidget(self.combineDo, 3, 0, 1, 2)
group = qt.QGroupBox('combine selected data')
group.setLayout(layout)
# group.setSizePolicy(qt.QSizePolicy.Fixed, qt.QSizePolicy.Fixed)
return group
def __init__(self, parent=None):
qt.QWidget.__init__(self, parent)
self.setWindowTitle("FitConfigGUI")
layout = qt.QGridLayout(self)
layout.setContentsMargins(0, 0, 0, 0)
layout.setSpacing(6)
self.FunLabel = qt.QLabel(self)
self.FunLabel.setText("Function")
layout.addWidget(self.FunLabel, 0, 0)
self.FunComBox = qt.QComboBox(self)
self.FunComBox.addItem("Add Function(s)")
self.FunComBox.setItemData(self.FunComBox.findText("Add Function(s)"),
"Load fit theories from a file",
qt.Qt.ToolTipRole)
layout.addWidget(self.FunComBox, 0, 1)
self.BkgLabel = qt.QLabel(self)
self.BkgLabel.setText("Background")
layout.addWidget(self.BkgLabel, 1, 0)
self.BkgComBox = qt.QComboBox(self)
self.BkgComBox.addItem("Add Background(s)")
self.BkgComBox.setItemData(
self.BkgComBox.findText("Add Background(s)"),
"Load background theories from a file", qt.Qt.ToolTipRole)
layout.addWidget(self.BkgComBox, 1, 1)
self.FunConfigureButton = qt.QPushButton(self)
self.FunConfigureButton.setText("Configure")
self.FunConfigureButton.setToolTip(
"Open a configuration dialog for the selected function")
layout.addWidget(self.FunConfigureButton, 0, 2)
self.BgConfigureButton = qt.QPushButton(self)
self.BgConfigureButton.setText("Configure")
self.BgConfigureButton.setToolTip(
"Open a configuration dialog for the selected background")
layout.addWidget(self.BgConfigureButton, 1, 2)
self.WeightCheckBox = qt.QCheckBox(self)
self.WeightCheckBox.setText("Weighted fit")
self.WeightCheckBox.setToolTip(
"Enable usage of weights in the least-square problem.\n Use" +
" the uncertainties (sigma) if provided, else use sqrt(y).")
layout.addWidget(self.WeightCheckBox, 0, 3, 2, 1)
layout.setColumnStretch(4, 1)
def makeColorGroup(self):
self.colorIndividual = qt.QRadioButton("individual")
self.colorIndividualButton = QColorLoop(self, [self.color])
self.colorIndividualButton.clicked.connect(
partial(self.openColorDialog, gco.COLOR_POLICY_INDIVIDUAL))
self.colorLoop1 = qt.QRadioButton("loop1")
self.colorLoop1Button = QColorLoop(self, gco.colorCycle1)
self.colorLoop1Button.clicked.connect(
partial(self.openColorDialog, gco.COLOR_POLICY_LOOP1))
self.colorLoop2 = qt.QRadioButton("loop2")
self.colorLoop2Button = QColorLoop(self, gco.colorCycle2)
self.colorLoop2Button.clicked.connect(
partial(self.openColorDialog, gco.COLOR_POLICY_LOOP2))
self.colorGradient = qt.QRadioButton("gradient")
gradient = gco.makeGradientCollection(self.color1, self.color2)
self.colorGradientButton = QColorLoop(self, gradient)
self.colorGradientButton.clicked.connect(
partial(self.openColorDialog, gco.COLOR_POLICY_GRADIENT))
self.colorAutoCollective = qt.QCheckBox(
"keep collective color rule\nwhen data model changes")
self.colorAutoCollective.setEnabled(self.isGroupSelected
or self.isTopGroupSelected)
self.colorRadioButtons = (self.colorIndividualButton, self.colorLoop1,
self.colorLoop2, self.colorGradient)
layoutC = qt.QVBoxLayout()
layoutC.setContentsMargins(10, 0, 2, 2)
layoutH = qt.QHBoxLayout()
layoutH.addWidget(self.colorIndividual)
layoutH.addWidget(self.colorIndividualButton)
layoutC.addLayout(layoutH)
layoutH = qt.QHBoxLayout()
layoutH.addWidget(self.colorLoop1)
layoutH.addWidget(self.colorLoop1Button)
layoutC.addLayout(layoutH)
layoutH = qt.QHBoxLayout()
layoutH.addWidget(self.colorLoop2)
layoutH.addWidget(self.colorLoop2Button)
layoutC.addLayout(layoutH)
layoutH = qt.QHBoxLayout()
layoutH.addWidget(self.colorGradient)
layoutH.addWidget(self.colorGradientButton)
layoutC.addLayout(layoutH)
layoutC.addWidget(self.colorAutoCollective)
groupColor = qt.QGroupBox('Color:')
groupColor.setLayout(layoutC)
return groupColor
def __init__(self, text, parent, value, checked=False):
qt.QWidget.__init__(self, parent=parent)
self.setLayout(qt.QHBoxLayout())
self._qcb = qt.QCheckBox(parent=self, text=text)
self.layout().addWidget(self._qcb)
self._qLineEdit = qt.QLineEdit()
self.layout().addWidget(self._qLineEdit)
self._qcb.toggled.connect(self.updateVis)
self.set(value=value, checked=checked)
self._qLineEdit.textChanged.connect(self._valueChanged)
def __init__(self, parent=None):
qt.QDialog.__init__(self, parent)
self.setWindowTitle("Median filter options")
self.mainLayout = qt.QHBoxLayout(self)
self.setLayout(self.mainLayout)
# filter width GUI
self.mainLayout.addWidget(qt.QLabel('filter width:', parent=self))
self._filterWidth = qt.QSpinBox(parent=self)
self._filterWidth.setMinimum(1)
self._filterWidth.setValue(1)
self._filterWidth.setSingleStep(2)
widthTooltip = """radius width of the pixel including in the filter
for each pixel"""
self._filterWidth.setToolTip(widthTooltip)
self._filterWidth.valueChanged.connect(self._filterOptionChanged)
self.mainLayout.addWidget(self._filterWidth)
# filter option GUI
self._filterOption = qt.QCheckBox('conditional', parent=self)
conditionalTooltip = """if check, implement a conditional filter"""
self._filterOption.stateChanged.connect(self._filterOptionChanged)
self.mainLayout.addWidget(self._filterOption)
def __createConfigurationPanel(self, parent):
panel = qt.QWidget(parent=parent)
layout = qt.QVBoxLayout()
panel.setLayout(layout)
self.__kind = qt.QButtonGroup(self)
self.__kind.setExclusive(True)
group = qt.QGroupBox(self)
group.setTitle("Image")
layout.addWidget(group)
groupLayout = qt.QVBoxLayout(group)
button = qt.QRadioButton(parent=panel)
button.setText("Island")
button.clicked.connect(self.generateIsland)
button.setCheckable(True)
button.setChecked(True)
groupLayout.addWidget(button)
self.__kind.addButton(button)
button = qt.QRadioButton(parent=panel)
button.setText("Gravity")
button.clicked.connect(self.generateGravityField)
button.setCheckable(True)
groupLayout.addWidget(button)
self.__kind.addButton(button)
button = qt.QRadioButton(parent=panel)
button.setText("Magnetic")
button.clicked.connect(self.generateMagneticField)
button.setCheckable(True)
groupLayout.addWidget(button)
self.__kind.addButton(button)
button = qt.QRadioButton(parent=panel)
button.setText("Spiral")
button.clicked.connect(self.generateSpiral)
button.setCheckable(True)
groupLayout.addWidget(button)
self.__kind.addButton(button)
button = qt.QRadioButton(parent=panel)
button.setText("Gradient")
button.clicked.connect(self.generateGradient)
button.setCheckable(True)
groupLayout.addWidget(button)
self.__kind.addButton(button)
button = qt.QRadioButton(parent=panel)
button.setText("Composite gradient")
button.clicked.connect(self.generateCompositeGradient)
button.setCheckable(True)
groupLayout.addWidget(button)
self.__kind.addButton(button)
button = qt.QPushButton(parent=panel)
button.setText("Generate a new image")
button.clicked.connect(self.generate)
groupLayout.addWidget(button)
# Contours
group = qt.QGroupBox(self)
group.setTitle("Contours")
layout.addWidget(group)
groupLayout = qt.QVBoxLayout(group)
button = qt.QCheckBox(parent=panel)
button.setText("Use the plot's mask")
button.setCheckable(True)
button.setChecked(True)
button.clicked.connect(self.updateContours)
groupLayout.addWidget(button)
self.__useMaskButton = button
button = qt.QPushButton(parent=panel)
button.setText("Update contours")
button.clicked.connect(self.updateContours)
groupLayout.addWidget(button)
# Implementations
group = qt.QGroupBox(self)
group.setTitle("Implementation")
layout.addWidget(group)
groupLayout = qt.QVBoxLayout(group)
self.__impl = qt.QButtonGroup(self)
self.__impl.setExclusive(True)
button = qt.QRadioButton(parent=panel)
button.setText("silx")
button.clicked.connect(self.updateContours)
button.setCheckable(True)
button.setChecked(True)
groupLayout.addWidget(button)
self.__implMerge = button
self.__impl.addButton(button)
button = qt.QRadioButton(parent=panel)
button.setText("silx with cache")
button.clicked.connect(self.updateContours)
button.setCheckable(True)
groupLayout.addWidget(button)
self.__implMergeCache = button
self.__impl.addButton(button)
button = qt.QRadioButton(parent=panel)
button.setText("skimage")
button.clicked.connect(self.updateContours)
button.setCheckable(True)
groupLayout.addWidget(button)
self.__implSkimage = button
self.__impl.addButton(button)
if MarchingSquaresSciKitImage is None:
button.setEnabled(False)
button.setToolTip("skimage is not installed or not compatible")
# Processing
group = qt.QGroupBox(self)
group.setTitle("Processing")
layout.addWidget(group)
group.setLayout(self.__createInfoLayout(group))
# Processing
group = qt.QGroupBox(self)
group.setTitle("Custom level")
layout.addWidget(group)
groupLayout = qt.QVBoxLayout(group)
label = qt.QLabel(parent=panel)
self.__value = qt.QSlider(panel)
self.__value.setOrientation(qt.Qt.Horizontal)
self.__value.sliderMoved.connect(self.__updateCustomContours)
self.__value.valueChanged.connect(self.__updateCustomContours)
groupLayout.addWidget(self.__value)
return panel
def __init__(self, parent=None, dirname=''):
super(SaveProjectDlg, self).__init__(parent=parent,
caption='Save project',
directory=dirname)
self.setOption(qt.QFileDialog.DontUseNativeDialog, True)
self.setAcceptMode(qt.QFileDialog.AcceptSave)
self.setFileMode(qt.QFileDialog.AnyFile)
self.setViewMode(qt.QFileDialog.Detail)
self.setNameFilter("ParSeq Project File (*.pspj)")
selNames = [it.alias for it in csi.selectedItems]
combinedNames = cco.combine_names(selNames)
sellen = len(csi.selectedItems)
exportStr = 'export data of {0} selected item{1}: {2}'.format(
sellen, 's' if sellen > 1 else '', combinedNames) if sellen < 4 \
else 'export data of {0} selected items'.format(sellen)
self.saveData = qt.QGroupBox(exportStr, self)
self.saveData.setCheckable(True)
self.saveData.setChecked(True)
layoutC = qt.QHBoxLayout()
layoutC.setContentsMargins(0, 2, 0, 0)
saveDataFrom = qt.QGroupBox('from nodes', self)
layoutF = qt.QVBoxLayout()
layoutF.setContentsMargins(4, 4, 4, 4)
self.saveNodeCBs = []
for i, (name, node) in enumerate(csi.nodes.items()):
tabName = u'{0} \u2013 {1}'.format(i + 1, name)
nodeCB = qt.QCheckBox(tabName, self)
self.saveNodeCBs.append(nodeCB)
layoutF.addWidget(nodeCB)
nodeCB.setChecked(True)
saveDataFrom.setLayout(layoutF)
layoutC.addWidget(saveDataFrom)
saveDataAs = qt.QGroupBox('as', self)
layoutA = qt.QVBoxLayout()
layoutA.setContentsMargins(4, 4, 4, 4)
self.saveAsCBs = []
for i, dtype in enumerate(ftypes):
asCB = qt.QCheckBox(dtype, self)
self.saveAsCBs.append(asCB)
layoutA.addWidget(asCB)
self.saveAsCBs[0].setChecked(True)
saveDataAs.setLayout(layoutA)
layoutC.addWidget(saveDataAs)
layoutP = qt.QVBoxLayout()
self.scriptCBmpl = qt.QCheckBox(
'save a matplotlib plotting script\nfor the exported data', self)
layoutP.addWidget(self.scriptCBmpl, alignment=qt.Qt.AlignTop)
self.scriptCBsilx = qt.QCheckBox(
'save a silx plotting script\nfor the exported data', self)
layoutP.addWidget(self.scriptCBsilx, alignment=qt.Qt.AlignTop)
layoutP.addStretch()
layoutC.addLayout(layoutP)
self.saveData.setLayout(layoutC)
self.layout().addWidget(self.saveData,
self.layout().rowCount(), 0, 1, 2)
self.layout().setRowStretch(self.layout().rowCount(), 0)
self.finished.connect(self.onFinish)
def populateOptions(self):
grid = self.ui.optionsGrid
# remove all old options
for i in reversed(range(grid.count())):
grid.itemAt(i).widget().setParent(None)
# add new ones
opts = self._current_subclass_opts()
self.formWidgets = {}
i = 0
for name, opt in opts.items():
# special: the options scanNr and fileName (or path) have their input
# widgets at the top of the GUI for convenience, while dataSource is
# handled per tab.
if name in ('dataSource', 'scanNr', 'path', 'fileName'):
continue
grid.addWidget(qt.QLabel(name), i, 0)
grid.addWidget(qt.QLabel(opt['doc']), i, 2)
if opt['type'] == int:
w = qt.QSpinBox()
w.setMaximum(9999)
w.setValue(opt['value'])
elif opt['type'] == float:
w = qt.QDoubleSpinBox()
w.setValue(opt['value'])
elif opt['type'] == bool:
w = qt.QCheckBox()
w.setChecked(opt['value'])
elif opt['type'] in (list, tuple):
w = qt.QLineEdit()
w.setText(str(opt['value']))
w.evaluate_me = True
elif type(opt['type']) in (list, tuple):
w = qt.QComboBox()
defaultindex = 0
for j, item in enumerate(opt['type']):
w.addItem(item)
if item == opt['value']:
defaultindex = j
w.setCurrentIndex(defaultindex)
else:
w = qt.QLineEdit()
w.setText(opt['value'])
w.evaluate_me = False
grid.addWidget(w, i, 1)
# save a dict of the options widgets, to parse when loading
self.formWidgets[name] = w
i += 1
# add a vertical spacer on the last line to make the table more compact
grid.setRowStretch(i, 1)
# special treatment
oldtext = str(self.ui.filenameBox.text())
if 'path' in opts.keys() and oldtext.startswith('<'):
self.ui.filenameBox.setText('<data path>')
elif 'fileName' in opts.keys() and oldtext.startswith('<'):
self.ui.filenameBox.setText('<input file>')
self.ui.filenameBox.setDisabled(not (
'path' in opts.keys() or 'fileName' in opts.keys()))
self.ui.browseButton.setDisabled(not (
'path' in opts.keys() or 'fileName' in opts.keys()))
self.ui.scanNumberBox.setDisabled('scanNr' not in opts.keys())
# per-tab dataSource option
boxes = {
self.ui.dataSource2dBox: 2,
self.ui.dataSource1dBox: 1,
self.ui.dataSource0dBox: 0
}
subclass_ = str(self.ui.scanClassBox.currentText())
try:
subclass = getattr(nmutils.core, subclass_)
except AttributeError:
subclass = None
for box, dim in boxes.items():
box.clear()
if subclass is not None:
for name in opts['dataSource']['type']:
if hasattr(subclass, 'sourceDims'
) and not subclass.sourceDims[name] == dim:
continue
box.addItem(name)
box.addItem('')
def createTreeViewConfigurationPanel(self, parent, treeview):
"""Create a configuration panel to allow to play with widget states"""
panel = qt.QWidget(parent)
panel.setLayout(qt.QHBoxLayout())
content = qt.QGroupBox("Create HDF5", panel)
content.setLayout(qt.QVBoxLayout())
panel.layout().addWidget(content)
combo = qt.QComboBox()
combo.addItem("Containing all types", get_hdf5_with_all_types)
combo.addItem("Containing all links", get_hdf5_with_all_links)
combo.addItem("Containing 1000 datasets", get_hdf5_with_1000_datasets)
combo.addItem("Containing 10000 datasets",
get_hdf5_with_10000_datasets)
combo.addItem("Containing 100000 datasets",
get_hdf5_with_100000_datasets)
combo.addItem("Containing recursive links",
get_hdf5_with_recursive_links)
combo.addItem("Containing external recursive links",
get_hdf5_with_external_recursive_links)
combo.addItem("Containing NXdata groups", get_hdf5_with_nxdata)
combo.activated.connect(self.__hdf5ComboChanged)
content.layout().addWidget(combo)
button = ThreadPoolPushButton(content, text="Create")
button.setCallable(combo.itemData(combo.currentIndex()))
button.succeeded.connect(self.__fileCreated)
content.layout().addWidget(button)
self.__hdf5Combo = combo
self.__createHdf5Button = button
asyncload = qt.QCheckBox("Async load", content)
asyncload.setChecked(self.__asyncload)
asyncload.toggled.connect(
lambda: self.useAsyncLoad(asyncload.isChecked()))
content.layout().addWidget(asyncload)
content.layout().addStretch(1)
content = qt.QGroupBox("Create EDF", panel)
content.setLayout(qt.QVBoxLayout())
panel.layout().addWidget(content)
combo = qt.QComboBox()
combo.addItem("Containing all types", get_edf_with_all_types)
combo.addItem("Containing 100000 datasets", get_edf_with_100000_frames)
combo.activated.connect(self.__edfComboChanged)
content.layout().addWidget(combo)
button = ThreadPoolPushButton(content, text="Create")
button.setCallable(combo.itemData(combo.currentIndex()))
button.succeeded.connect(self.__fileCreated)
content.layout().addWidget(button)
self.__edfCombo = combo
self.__createEdfButton = button
content.layout().addStretch(1)
option = qt.QGroupBox("Tree options", panel)
option.setLayout(qt.QVBoxLayout())
panel.layout().addWidget(option)
sorting = qt.QCheckBox("Enable sorting", option)
sorting.setChecked(
treeview.selectionMode() == qt.QAbstractItemView.MultiSelection)
sorting.toggled.connect(
lambda: treeview.setSortingEnabled(sorting.isChecked()))
option.layout().addWidget(sorting)
multiselection = qt.QCheckBox("Multi-selection", option)
multiselection.setChecked(
treeview.selectionMode() == qt.QAbstractItemView.MultiSelection)
switch_selection = lambda: treeview.setSelectionMode(
qt.QAbstractItemView.MultiSelection if multiselection.isChecked(
) else qt.QAbstractItemView.SingleSelection)
multiselection.toggled.connect(switch_selection)
option.layout().addWidget(multiselection)
filedrop = qt.QCheckBox("Drop external file", option)
filedrop.setChecked(treeview.findHdf5TreeModel().isFileDropEnabled())
filedrop.toggled.connect(lambda: treeview.findHdf5TreeModel().
setFileDropEnabled(filedrop.isChecked()))
option.layout().addWidget(filedrop)
filemove = qt.QCheckBox("Reorder files", option)
filemove.setChecked(treeview.findHdf5TreeModel().isFileMoveEnabled())
filemove.toggled.connect(lambda: treeview.findHdf5TreeModel().
setFileMoveEnabled(filedrop.isChecked()))
option.layout().addWidget(filemove)
option.layout().addStretch(1)
option = qt.QGroupBox("Header options", panel)
option.setLayout(qt.QVBoxLayout())
panel.layout().addWidget(option)
autosize = qt.QCheckBox("Auto-size headers", option)
autosize.setChecked(treeview.header().hasAutoResizeColumns())
autosize.toggled.connect(lambda: treeview.header().
setAutoResizeColumns(autosize.isChecked()))
option.layout().addWidget(autosize)
columnpopup = qt.QCheckBox("Popup to hide/show columns", option)
columnpopup.setChecked(treeview.header().hasHideColumnsPopup())
columnpopup.toggled.connect(lambda: treeview.header(
).setEnableHideColumnsPopup(columnpopup.isChecked()))
option.layout().addWidget(columnpopup)
define_columns = qt.QComboBox()
define_columns.addItem("Default columns",
treeview.findHdf5TreeModel().COLUMN_IDS)
define_columns.addItem("Only name and Value", [
treeview.findHdf5TreeModel().NAME_COLUMN,
treeview.findHdf5TreeModel().VALUE_COLUMN
])
define_columns.activated.connect(lambda index: treeview.header(
).setSections(define_columns.itemData(index)))
option.layout().addWidget(define_columns)
option.layout().addStretch(1)
panel.layout().addStretch(1)
return panel
def __init__(self, parent=None):
super(PrintGeometryWidget, self).__init__(parent)
self.mainLayout = qt.QGridLayout(self)
self.mainLayout.setContentsMargins(0, 0, 0, 0)
self.mainLayout.setSpacing(2)
hbox = qt.QWidget()
hboxLayout = qt.QHBoxLayout(hbox)
hboxLayout.setContentsMargins(0, 0, 0, 0)
hboxLayout.setSpacing(2)
label = qt.QLabel(self)
label.setText("Units")
label.setAlignment(qt.Qt.AlignCenter)
self._pageButton = qt.QRadioButton()
self._pageButton.setText("Page")
self._inchButton = qt.QRadioButton()
self._inchButton.setText("Inches")
self._cmButton = qt.QRadioButton()
self._cmButton.setText("Centimeters")
self._buttonGroup = qt.QButtonGroup(self)
self._buttonGroup.addButton(self._pageButton)
self._buttonGroup.addButton(self._inchButton)
self._buttonGroup.addButton(self._cmButton)
self._buttonGroup.setExclusive(True)
# units
self.mainLayout.addWidget(label, 0, 0, 1, 4)
hboxLayout.addWidget(self._pageButton)
hboxLayout.addWidget(self._inchButton)
hboxLayout.addWidget(self._cmButton)
self.mainLayout.addWidget(hbox, 1, 0, 1, 4)
self._pageButton.setChecked(True)
# xOffset
label = qt.QLabel(self)
label.setText("X Offset:")
self.mainLayout.addWidget(label, 2, 0)
self._xOffset = qt.QLineEdit(self)
validator = qt.QDoubleValidator(None)
self._xOffset.setValidator(validator)
self._xOffset.setText("0.1")
self.mainLayout.addWidget(self._xOffset, 2, 1)
# yOffset
label = qt.QLabel(self)
label.setText("Y Offset:")
self.mainLayout.addWidget(label, 2, 2)
self._yOffset = qt.QLineEdit(self)
validator = qt.QDoubleValidator(None)
self._yOffset.setValidator(validator)
self._yOffset.setText("0.1")
self.mainLayout.addWidget(self._yOffset, 2, 3)
# width
label = qt.QLabel(self)
label.setText("Width:")
self.mainLayout.addWidget(label, 3, 0)
self._width = qt.QLineEdit(self)
validator = qt.QDoubleValidator(None)
self._width.setValidator(validator)
self._width.setText("0.9")
self.mainLayout.addWidget(self._width, 3, 1)
# height
label = qt.QLabel(self)
label.setText("Height:")
self.mainLayout.addWidget(label, 3, 2)
self._height = qt.QLineEdit(self)
validator = qt.QDoubleValidator(None)
self._height.setValidator(validator)
self._height.setText("0.9")
self.mainLayout.addWidget(self._height, 3, 3)
# aspect ratio
self._aspect = qt.QCheckBox(self)
self._aspect.setText("Keep screen aspect ratio")
self._aspect.setChecked(True)
self.mainLayout.addWidget(self._aspect, 4, 1, 1, 2)
def __init__(self, parent=None):
super(SearchPage, self).__init__(parent)
layout = qt.QVBoxLayout(self)
self.manualFwhmGB = qt.QGroupBox("Define FWHM manually", self)
self.manualFwhmGB.setCheckable(True)
self.manualFwhmGB.setToolTip(
"If disabled, the FWHM parameter used for peak search is " +
"estimated based on the highest peak in the data")
layout.addWidget(self.manualFwhmGB)
# ------------ GroupBox fwhm--------------------------
layout2 = qt.QHBoxLayout(self.manualFwhmGB)
self.manualFwhmGB.setLayout(layout2)
label = qt.QLabel("Fwhm Points", self.manualFwhmGB)
layout2.addWidget(label)
self.fwhmPointsSpin = qt.QSpinBox(self.manualFwhmGB)
self.fwhmPointsSpin.setRange(0, 999999)
self.fwhmPointsSpin.setToolTip(
"Typical peak fwhm (number of data points)")
layout2.addWidget(self.fwhmPointsSpin)
# ----------------------------------------------------
self.manualScalingGB = qt.QGroupBox("Define scaling manually", self)
self.manualScalingGB.setCheckable(True)
self.manualScalingGB.setToolTip(
"If disabled, the Y scaling used for peak search is " +
"estimated automatically")
layout.addWidget(self.manualScalingGB)
# ------------ GroupBox scaling-----------------------
layout3 = qt.QHBoxLayout(self.manualScalingGB)
self.manualScalingGB.setLayout(layout3)
label = qt.QLabel("Y Scaling", self.manualScalingGB)
layout3.addWidget(label)
self.yScalingEntry = qt.QLineEdit(self.manualScalingGB)
self.yScalingEntry.setToolTip(
"Data values will be multiplied by this value prior to peak" +
" search")
self.yScalingEntry.setValidator(qt.QDoubleValidator(self))
layout3.addWidget(self.yScalingEntry)
# ----------------------------------------------------
# ------------------- grid layout --------------------
containerWidget = qt.QWidget(self)
layout4 = qt.QHBoxLayout(containerWidget)
containerWidget.setLayout(layout4)
label = qt.QLabel("Sensitivity", containerWidget)
layout4.addWidget(label)
self.sensitivityEntry = qt.QLineEdit(containerWidget)
self.sensitivityEntry.setToolTip(
"Peak search sensitivity threshold, expressed as a multiple " +
"of the standard deviation of the noise.\nMinimum value is 1 " +
"(to be detected, peak must be higher than the estimated noise)")
sensivalidator = qt.QDoubleValidator(self)
sensivalidator.setBottom(1.0)
self.sensitivityEntry.setValidator(sensivalidator)
layout4.addWidget(self.sensitivityEntry)
# ----------------------------------------------------
layout.addWidget(containerWidget)
self.forcePeakPresenceCB = qt.QCheckBox("Force peak presence", self)
self.forcePeakPresenceCB.setToolTip(
"If peak search algorithm is unsuccessful, place one peak " +
"at the maximum of the curve")
layout.addWidget(self.forcePeakPresenceCB)
layout.addStretch()
self.setDefault()
def __init__(self, parent=None):
super().__init__(parent)
self.pv = loadPV()
bigBoldFont = qt.QFont()
bigBoldFont.setPointSize(9)
bigBoldFont.setBold(True)
self.engineLabel = qt.QLabel("State : ")
self.engineLabel.setMinimumHeight(50)
self.engineLabel.setMaximumHeight(50)
self.engineStatus = qt.QLabel("EngineStatus")
self.engineStatus.setFrameShape(qt.QFrame.Box)
self.engineStatus.setFrameShadow(qt.QFrame.Sunken)
self.engineStatus.setAlignment(qt.Qt.AlignCenter)
self.engineStatus.setMinimumSize(qt.QSize(150, 50))
self.engineStatus.setMaximumSize(qt.QSize(150, 50))
self.abortButton = qt.QPushButton(self)
self.abortButton.setText("Scan Abort")
self.abortButton.setMinimumSize(qt.QSize(130, 50))
self.abortButton.setMaximumSize(qt.QSize(115, 50))
# high limit for scaler counts
limit_hi = 900000
self.I0_rbv = CounterRbvLabel(pv=self.pv['Scaler']['I0_counter_cal'],
scaler_pv=self.pv['Scaler']['scaler'],
limit_hi=limit_hi)
self.It_rbv = CounterRbvLabel(pv=self.pv['Scaler']['It_counter_cal'],
scaler_pv=self.pv['Scaler']['scaler'],
limit_hi=limit_hi)
self.If_rbv = CounterRbvLabel(pv=self.pv['Scaler']['If_counter_cal'],
scaler_pv=self.pv['Scaler']['scaler'],
limit_hi=limit_hi)
self.Ir_rbv = CounterRbvLabel(pv=self.pv['Scaler']['Ir_counter_cal'],
scaler_pv=self.pv['Scaler']['scaler'],
limit_hi=limit_hi)
self.theta_angle_label = EpicsValueLabel(
self.pv['DCM']['mono_theta'] + '.RBV',
moving_pv=self.pv['DCM']['mono_theta_dmov'])
self.theta_angle_label.setMinimumSize(qt.QSize(130, 30))
self.theta_angle_label.setMaximumSize(qt.QSize(130, 30))
self.theta_energy_label = EpicsValueLabel(
self.pv['DCM']['mono_theta'] + '.RBV',
moving_pv=self.pv['DCM']['mono_theta_dmov'],
convert=angle_to_energy)
self.theta_energy_label.setMinimumSize(qt.QSize(130, 30))
self.theta_energy_label.setMaximumSize(qt.QSize(130, 30))
self.life_time_label = EpicsValueLabel(self.pv['Beam']['LifeTime'],
precision=2,
convert=lambda x: x / 3600.)
self.life_time_label.setMinimumSize(qt.QSize(100, 30))
self.life_time_label.setFrameShape(qt.QFrame.Panel)
self.life_time_label.setFrameShadow(qt.QFrame.Sunken)
self.life_time_label.setAlignment(qt.Qt.AlignCenter)
self.topup_label = EpicsValueLabel(self.pv['Beam']['TopUpCount'],
precision=2)
self.topup_label.setMinimumSize(qt.QSize(100, 30))
self.topup_label.setFrameShape(qt.QFrame.Panel)
self.topup_label.setFrameShadow(qt.QFrame.Sunken)
self.topup_label.setAlignment(qt.Qt.AlignCenter)
self.beam_current_label = EpicsValueLabel(self.pv['Beam']['Current'],
precision=2)
self.beam_current_label.setMinimumSize(qt.QSize(100, 30))
self.beam_current_label.setMaximumSize(qt.QSize(100, 30))
self.beam_current_label.setFrameShape(qt.QFrame.Panel)
self.beam_current_label.setFrameShadow(qt.QFrame.Sunken)
self.beam_current_label.setAlignment(qt.Qt.AlignCenter)
self.num_of_steps_label = qt.QLabel("not conn.")
self.num_of_steps_label.setMinimumSize(qt.QSize(100, 30))
self.num_of_steps_label.setMaximumSize(qt.QSize(100, 30))
self.num_of_steps_label.setFrameShape(qt.QFrame.Panel)
self.num_of_steps_label.setFrameShadow(qt.QFrame.Sunken)
self.num_of_steps_label.setAlignment(qt.Qt.AlignCenter)
self.scan_point_label = qt.QLabel("not conn.")
self.scan_point_label.setMinimumSize(qt.QSize(90, 30))
self.scan_point_label.setMaximumSize(qt.QSize(90, 30))
self.scan_point_label.setFrameShape(qt.QFrame.Panel)
self.scan_point_label.setFrameShadow(qt.QFrame.Sunken)
self.scan_point_label.setAlignment(qt.Qt.AlignCenter)
self.scanInfoLoopTimeLabel = qt.QLabel('LoopTime : ')
self.loop_time_label = qt.QLabel("not conn.")
self.loop_time_label.setMinimumSize(qt.QSize(90, 30))
self.loop_time_label.setMaximumSize(qt.QSize(90, 30))
self.loop_time_label.setFrameShape(qt.QFrame.Panel)
self.loop_time_label.setFrameShadow(qt.QFrame.Sunken)
self.loop_time_label.setAlignment(qt.Qt.AlignCenter)
self.num_of_history_spin_box = qt.QDoubleSpinBox(self)
self.num_of_history_spin_box.setMinimumSize(qt.QSize(220, 30))
self.num_of_history_spin_box.setMaximumSize(qt.QSize(220, 30))
self.num_of_history_spin_box.setAlignment(qt.Qt.AlignCenter)
self.num_of_history_spin_box.setDecimals(0)
self.num_of_history_spin_box.setMinimum(1.0)
self.num_of_history_spin_box.setMaximum(10.0)
self.num_of_history_spin_box.setSingleStep(1.0)
self.num_of_history_spin_box.setProperty("value", 1.0)
self.x_axis_type_combo_box = qt.QComboBox(self)
self.x_axis_type_combo_box.setMinimumSize(qt.QSize(220, 30))
self.x_axis_type_combo_box.setMaximumSize(qt.QSize(220, 30))
self.x_axis_type_combo_box.addItem("")
self.x_axis_type_combo_box.addItem("")
self.x_axis_type_combo_box.setItemText(0, "Delta(E-E0)")
self.x_axis_type_combo_box.setItemText(1, "Energy(eV)")
self.y_axis_type_combo_box = qt.QComboBox(self)
self.y_axis_type_combo_box.setMinimumSize(qt.QSize(130, 30))
self.y_axis_type_combo_box.setMaximumSize(qt.QSize(130, 30))
self.y_axis_type_combo_box.addItem("")
self.y_axis_type_combo_box.addItem("")
self.y_axis_type_combo_box.addItem("")
self.y_axis_type_combo_box.addItem("")
self.y_axis_type_combo_box.addItem("")
self.y_axis_type_combo_box.addItem("")
self.y_axis_type_combo_box.addItem("")
self.y_axis_type_combo_box.setItemText(0, "Transmittance")
self.y_axis_type_combo_box.setItemText(1, "Fluorescence")
self.y_axis_type_combo_box.setItemText(2, "Reference")
self.y_axis_type_combo_box.setItemText(3, "View I0(1) Only")
self.y_axis_type_combo_box.setItemText(4, "View IT(2) Only")
self.y_axis_type_combo_box.setItemText(5, "View IF(3) Only")
self.y_axis_type_combo_box.setItemText(6, "View IR(4) Only")
self.derivativeCB = qt.QCheckBox(self)
self.derivativeCB.setText('deriv.')
main_panel = qt.QWidget(self)
main_panel.setLayout(qt.QHBoxLayout())
self.setCentralWidget(main_panel)
REWidget = qt.QWidget(self)
REWidget.setLayout(qt.QFormLayout())
REWidget.layout().setLabelAlignment(qt.Qt.AlignRight)
REWidget.layout().setFormAlignment(qt.Qt.AlignBottom)
REWidget.layout().setContentsMargins(0, 0, 0, 0)
REWidget.layout().addWidget(self.engineStatus)
REWidget.layout().addWidget(self.abortButton)
REWidget.layout().addRow(
self.engineLabel, addWidgets([self.engineStatus,
self.abortButton]))
counterGB = qt.QGroupBox("Counters", main_panel)
counterGB.setLayout(qt.QHBoxLayout())
counterGB.layout().setSpacing(20)
counterGB.layout().addWidget(addLabelWidgetVert('I0', self.I0_rbv))
counterGB.layout().addWidget(addLabelWidgetVert('It', self.It_rbv))
counterGB.layout().addWidget(addLabelWidgetVert('Ir', self.Ir_rbv))
counterGB.layout().addWidget(addLabelWidgetVert('If', self.If_rbv))
dcmGB = qt.QGroupBox("Monochromator", main_panel)
dcmGB.setLayout(qt.QFormLayout())
dcmGB.layout().setLabelAlignment(qt.Qt.AlignRight)
dcmGB.layout().addRow('Angle [Deg.] : ', self.theta_angle_label)
dcmGB.layout().addRow('Energy [eV]: ', self.theta_energy_label)
beamGB = qt.QGroupBox("Beam", main_panel)
beamGB.setLayout(qt.QFormLayout())
beamGB.layout().setLabelAlignment(qt.Qt.AlignRight)
beamGB.layout().addRow('Life Time [hours] : ', self.life_time_label)
beamGB.layout().addRow('TopUp Count [sec.] : ', self.topup_label)
beamGB.layout().addRow('Current [mA] : ', self.beam_current_label)
scanInfoGB = qt.QGroupBox("Scan Info", main_panel)
scanInfoGB.setLayout(qt.QFormLayout())
scanInfoGB.layout().setLabelAlignment(qt.Qt.AlignRight)
scanInfoGB.layout().addRow('NoOfSteps : ', self.num_of_steps_label)
scanInfoGB.layout().addRow('ScanPoint : ', self.scan_point_label)
scanInfoGB.layout().addRow(self.scanInfoLoopTimeLabel,
self.loop_time_label)
plotControlGB = qt.QGroupBox("Plot Control", main_panel)
plotControlGB.setLayout(qt.QFormLayout())
plotControlGB.layout().setLabelAlignment(qt.Qt.AlignRight)
plotControlGB.layout().addRow('# Of History : ',
self.num_of_history_spin_box)
plotControlGB.layout().addRow('X-axis type : ',
self.x_axis_type_combo_box)
plotControlGB.layout().addRow(
'Y-axis type : ',
addWidgets([self.y_axis_type_combo_box, self.derivativeCB]))
main_panel.layout().addWidget(addStretchWidget(REWidget))
main_panel.layout().addStretch(1)
main_panel.layout().addWidget(addStretchWidget(dcmGB))
main_panel.layout().addWidget(addStretchWidget(counterGB))
main_panel.layout().addWidget(addStretchWidget(beamGB))
main_panel.layout().addWidget(addStretchWidget(scanInfoGB))
main_panel.layout().addWidget(addStretchWidget(plotControlGB))
def __init__(self, parent=None):
qt.QWidget.__init__(self, parent)
self.mainLayout = qt.QGridLayout(self)
self.mainLayout.setColumnStretch(1, 1)
# Algorithm choice ---------------------------------------------------
self.algorithmComboLabel = qt.QLabel(self)
self.algorithmComboLabel.setText("Background algorithm")
self.algorithmCombo = qt.QComboBox(self)
self.algorithmCombo.addItem("Strip")
self.algorithmCombo.addItem("Snip")
self.algorithmCombo.activated[int].connect(
self._algorithmComboActivated)
# Strip parameters ---------------------------------------------------
self.stripWidthLabel = qt.QLabel(self)
self.stripWidthLabel.setText("Strip Width")
self.stripWidthSpin = qt.QSpinBox(self)
self.stripWidthSpin.setMaximum(100)
self.stripWidthSpin.setMinimum(1)
self.stripWidthSpin.valueChanged[int].connect(self._emitSignal)
self.stripIterLabel = qt.QLabel(self)
self.stripIterLabel.setText("Strip Iterations")
self.stripIterValue = qt.QLineEdit(self)
validator = qt.QIntValidator(self.stripIterValue)
self.stripIterValue._v = validator
self.stripIterValue.setText("0")
self.stripIterValue.editingFinished[()].connect(self._emitSignal)
self.stripIterValue.setToolTip(
"Number of iterations for strip algorithm.\n" +
"If greater than 999, an 2nd pass of strip filter is " +
"applied to remove artifacts created by first pass.")
# Snip parameters ----------------------------------------------------
self.snipWidthLabel = qt.QLabel(self)
self.snipWidthLabel.setText("Snip Width")
self.snipWidthSpin = qt.QSpinBox(self)
self.snipWidthSpin.setMaximum(300)
self.snipWidthSpin.setMinimum(0)
self.snipWidthSpin.valueChanged[int].connect(self._emitSignal)
# Smoothing parameters -----------------------------------------------
self.smoothingFlagCheck = qt.QCheckBox(self)
self.smoothingFlagCheck.setText("Smoothing Width (Savitsky-Golay)")
self.smoothingFlagCheck.toggled.connect(self._smoothingToggled)
self.smoothingSpin = qt.QSpinBox(self)
self.smoothingSpin.setMinimum(3)
#self.smoothingSpin.setMaximum(40)
self.smoothingSpin.setSingleStep(2)
self.smoothingSpin.valueChanged[int].connect(self._emitSignal)
# Anchors ------------------------------------------------------------
self.anchorsGroup = qt.QWidget(self)
anchorsLayout = qt.QHBoxLayout(self.anchorsGroup)
anchorsLayout.setSpacing(2)
anchorsLayout.setContentsMargins(0, 0, 0, 0)
self.anchorsFlagCheck = qt.QCheckBox(self.anchorsGroup)
self.anchorsFlagCheck.setText("Use anchors")
self.anchorsFlagCheck.setToolTip(
"Define X coordinates of points that must remain fixed")
self.anchorsFlagCheck.stateChanged[int].connect(
self._anchorsToggled)
anchorsLayout.addWidget(self.anchorsFlagCheck)
maxnchannel = 16384 * 4 # Fixme ?
self.anchorsList = []
num_anchors = 4
for i in range(num_anchors):
anchorSpin = qt.QSpinBox(self.anchorsGroup)
anchorSpin.setMinimum(0)
anchorSpin.setMaximum(maxnchannel)
anchorSpin.valueChanged[int].connect(self._emitSignal)
anchorsLayout.addWidget(anchorSpin)
self.anchorsList.append(anchorSpin)
# Layout ------------------------------------------------------------
self.mainLayout.addWidget(self.algorithmComboLabel, 0, 0)
self.mainLayout.addWidget(self.algorithmCombo, 0, 2)
self.mainLayout.addWidget(self.stripWidthLabel, 1, 0)
self.mainLayout.addWidget(self.stripWidthSpin, 1, 2)
self.mainLayout.addWidget(self.stripIterLabel, 2, 0)
self.mainLayout.addWidget(self.stripIterValue, 2, 2)
self.mainLayout.addWidget(self.snipWidthLabel, 3, 0)
self.mainLayout.addWidget(self.snipWidthSpin, 3, 2)
self.mainLayout.addWidget(self.smoothingFlagCheck, 4, 0)
self.mainLayout.addWidget(self.smoothingSpin, 4, 2)
self.mainLayout.addWidget(self.anchorsGroup, 5, 0, 1, 4)
# Initialize interface -----------------------------------------------
self._setAlgorithm("strip")
self.smoothingFlagCheck.setChecked(False)
self._smoothingToggled(is_checked=False)
self.anchorsFlagCheck.setChecked(False)
self._anchorsToggled(is_checked=False)
