def triples_generated(self):
context = rdflib.Namespace(
f'https://apinatomy.org/uris/models/{self.id}/ids/')
for cls in [Node, Link, Lyph, Tree, Group, Material]:
if cls.key in self.blob:
# FIXME trees not in all blobs
for blob in self.blob[cls.key]:
try:
yield from cls(blob, context).triples()
except NoIdError as e:
logd.exception(e)
def lift(data, lifts, source_key_optional=True):
"""
lifts are lists with the following structure
[[path, function], ...]
the only difference from derives is that lift
overwrites the underlying data (e.g. a filepath
would be replaced by the contents of the file)
"""
for path, function in lifts:
try:
old_value = adops.get(data, path)
except exc.NoSourcePathError as e:
if source_key_optional:
logd.exception(str(type(e)))
continue
else:
raise e
new_value = function(old_value)
adops.add(data, path, new_value, fail_on_exists=False)